Truf026822.2
Basic Information
- Insect
- Tachinus rufipes
- Gene Symbol
- retn
- Assembly
- GCA_963932245.1
- Location
- OZ010743.1:111327980-111344994[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 1.2e-15 60.0 0.0 17 89 19 89 15 89 0.94 2 2 4.9 5.3e+04 -3.0 0.0 25 37 227 239 187 241 0.58
Sequence Information
- Coding Sequence
- ATGTTTATCGCAGTAGCTTTGGAAGTGACCGGAGGGTGTCTACTATTGTGGGAAAgtaCACCAATAAATCGACTGCCGATTATGGCGAAATCAGTATTAGATCTCTACGAATTATACAATCTTGTGATAGCGCGTGGCGGTTTAGTCGATGTTATCAACAAGAAACTCTGGCAGGAAATCATCAAGGGACTACATTTACCATCATCTATTACATCGGCAGCATTCACACTTCGGACGCAgtatatgaaatatttatatcCATACGAATGTGAGAAGCGGAGATTGAGCACGCCTGCTGAATTGCAGGCGGCTATTGATGGAAACCGAAGGGAAGGCAGACGCAGCAGTTATGGACAATACGAATCAGTGCAGAGATCCCCTAACCCATCACAAATGTCACCATTATCATTGGTATCACAACAACAACATTTAGCTGCGAGAATGAATTCGGTAATGAGTGGAGGCATCGGTTTACACAACGGAGCACATCATCCCAGCCATCCAACACCAATGGGACAGCCTCTAAATACAGGTCCTTTGCCCGGATTAGCACCAAGCGAATTCGAAGCGAGAATGATGGAATACGTAAAGTTATTGAATAAGGAAATTAGGAGTTCAGCTTCCACGCCGCCAAGACAAGGGGATTCTTCACCACCCAGCGCCACATCACCGTTAAATCAGTTGGAAATGTCCAGAATGACGTTATGGAATCTGTACAATAATAATCAACCCATAGTGGAACCACAGAAGGAGGCGTTAAATTTGTCCGATAATTCACCGCCGACAATGAAAAGGGAAAGGGAGACGACTGATTCGATGGAGTCACCACCACCAGTCAAAAAGTTCATCAAAGATGAGGAAGAACAACAACCAAAACCCATTTCACCAAGcacacatattaaaattaacagtaGAGGTGATTCTCGCACAGGTGACAATTCCCTAGTTGTAAGTATGGAACTGAACGGTGTCACATATCAAGGAGTCCTTTTCGCACAGACGCCTGCCACCGGGAGGACCGCAATCGCATCGTAA
- Protein Sequence
- MFIAVALEVTGGCLLLWESTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYESVQRSPNPSQMSPLSLVSQQQHLAARMNSVMSGGIGLHNGAHHPSHPTPMGQPLNTGPLPGLAPSEFEARMMEYVKLLNKEIRSSASTPPRQGDSSPPSATSPLNQLEMSRMTLWNLYNNNQPIVEPQKEALNLSDNSPPTMKRERETTDSMESPPPVKKFIKDEEEQQPKPISPSTHIKINSRGDSRTGDNSLVVSMELNGVTYQGVLFAQTPATGRTAIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01184290;
- 90% Identity
- iTF_01196490;
- 80% Identity
- -