Llun011596.1
Basic Information
- Insect
- Lordithon lunulatus
- Gene Symbol
- retn
- Assembly
- GCA_963942505.1
- Location
- OZ012668.1:9414619-9419680[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-22 5.4e-18 66.6 0.0 6 89 4 85 3 85 0.95
Sequence Information
- Coding Sequence
- ATGTTCGCGATTCAAACACTAATGGGTTTCGTCAAACTAGTGGgcaCTCCAATCAATAGGCTGCCGATCATGGCGAAATCAGTATTAGACCTGTACGAGCTCTACAATTTGGTTATCGCGAGGGGTGGGCTGGTGGACGTAATCAACAAGAAGTTGTGGCAGGAAATTATCAAAGGACTGCATCTTCCATCCTCAATCACATCGGCGGCATTCACACTTCGAACGCAatatatgaaatatttgtatCCATACGAGTGTGAAAAACGTCGTCTCAGCACTCCCGCGGAGCTCCAAGCAGCCATCGACGGCAACAGAAGAGAAGGCCGCCGCAGCAGCTACGGGCAATACGAGTCAGTCCAAAGATCTCCAAACCCATCCCAAATGTCCCCCCTAACCCTAGTATCCCAACAGCAACACATCGCAGCTCGCATGAACTCCGTAATGAGCGGCGGCATCGGCTTGCACAGCGCCGCCCATCACCCGACCCATCCTACCCCAATGGGCCAACCGTTAAACCCCGGCCCGCTCCCCGGTTTAGCACCTAGCGAGTTCGAAGCGCGAATGATGGAATACGTAAAGcttttaaataaagaaatgcGATGCACCACAGCCACGACGCCACCAAGAACAGGAGACTCATCACCCCCCAGCTCCACCTCCCCATTGAATCCCCTAGAAATGTCTCGGATGACTTTGTGGAATCTATACAACAACAACCAGCCACAGGTGGAACCTCAGAAGGAGGCTCTGAACCTGTCAGATTCTTCGCCACCGCTCGTCAAAAGGGAGCCGGATTTGCGGGACTCGCCGCCGCCGGCGAAGAAATTAAAGGACGACGAGGATCAACTGAAAGCCTTGTCGCCAAGCAcacatatcaaaataaatagcCGAGGTGATTCCCGGACTGGTGACAATTCCTTAGTGGTAAGCATGGAGCTGAACGGCGTGACCTACCAAGGCGTCCTCTTCGCGCAAACACCCACATCCGGCAGAACAGCGATCGCGTCGTAA
- Protein Sequence
- MFAIQTLMGFVKLVGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYESVQRSPNPSQMSPLTLVSQQQHIAARMNSVMSGGIGLHSAAHHPTHPTPMGQPLNPGPLPGLAPSEFEARMMEYVKLLNKEMRCTTATTPPRTGDSSPPSSTSPLNPLEMSRMTLWNLYNNNQPQVEPQKEALNLSDSSPPLVKREPDLRDSPPPAKKLKDDEDQLKALSPSTHIKINSRGDSRTGDNSLVVSMELNGVTYQGVLFAQTPTSGRTAIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01184290;
- 90% Identity
- iTF_01196490;
- 80% Identity
- -