Pmec021622.1
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- pnr
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000009.1:6649979-6655084[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-18 2.2e-14 53.9 3.2 1 34 177 209 177 211 0.97 2 2 5.7e-19 3.4e-15 56.5 6.2 1 35 231 264 231 265 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGCGGTGGGTACGGCGCGAGCTCTGACTACCAACAGCAGTcccagcagcaacagcaacaacacGGGCAGCAGCTCCAGGCGCCCGTCTACGTGCCTTCCTCGAGGCCCACCATTCCGTCGGCAGCGACGGCGGCCGCGGCAGCCGCAGCGGCGGCCCAGTACCACTCGTTTCCCGGTTCCGGCTCGCCCGCCTGGGAGAAGACAGCAGCTTCCTGGCAGCATGGAGTGGAGACGTACGCGGCGCATCACGCGCTCGCGGGCCACGCGAGCGGATCCGCGGCCGCGGCCGCAGCCGCCGCCGCGATGGGACCGCACTCGGGCCACGCGCATCCGCACGCGACCCATCCGCACACCGGACATCCTCACTCGAGCCTCGCCGCCGCCGCGGCACCCTTCTACGCCCAAAACGTCGCGATGATGTCCTCCTGGCGAGCTTACGACGGAGCCGGATTCCAGCGGGCCTCGCCATACGACACGGCGATGGACTTTCAATTCGGCGAGGGTCGCGAGTGCGTGAATTGCGGCGCTATATCGACGCCGCTGTGGAGGAGAGACGGCACGGGGCATTATCTGTGCAACGCGTGCGGACTCTATCACAAGATGAACGGAATGAACAGACCGCTGATCAAGCCCTCGAAACGGCTGACAGCGACCAGACGGCTGGGACTGTGCTGCACCAACTGTGGAACCCGCACCACCACCCTCTGGAGGCGCAACAACGAGGGCGAGCCCGTCTGCAACGCTTGCGGCCTCTACTTCAAGCTCCATGGCGTCAACCGGCCGCTGGCCATGCGGAAAGACGGCATTCAAACGCGGAAACGAAAGCCGAAGAAGACGCCGGAGTCCAACGCCAGGCCGTCGACGGGCGAACACGACGCGGCCACCGCTTCCACAGCATCCTCTCCGTCCACGGAATTGAAGAGCAaccagcaacagcagcagcaacagcagcagcaacagcagcagcagcaacagcagcatCAAATCGAGGCGTCAAAGTCGTCTGGCGGTGCGTCGAGCTCCACGGACAGACCGGTCTACCTCGGACACACGTCTCTCCTGGCCACCGGAAGCGTGGCTACCGTGAAAACGGAACCGCGAAGCTGCGACGGCATAGTCGGCCAACCCTATTCCTCCTACTATCAGCACCCTCATCAGCTGGGAGTGACGAGTAGCGAGCACCAGCAACAGACTTACTACGGAAGCCAGGAGGCGCCATATCATCACCAGCACCACGTCACCGCGGCCGCCAAGCTGCTCGCCTCTTCGTAA
- Protein Sequence
- MFHGGGSGGYGASSDYQQQSQQQQQQHGQQLQAPVYVPSSRPTIPSAATAAAAAAAAAQYHSFPGSGSPAWEKTAASWQHGVETYAAHHALAGHASGSAAAAAAAAAMGPHSGHAHPHATHPHTGHPHSSLAAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPESNARPSTGEHDAATASTASSPSTELKSNQQQQQQQQQQQQQQQQQHQIEASKSSGGASSSTDRPVYLGHTSLLATGSVATVKTEPRSCDGIVGQPYSSYYQHPHQLGVTSSEHQQQTYYGSQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00361281; iTF_00084962; iTF_00088461; iTF_00085841; iTF_00087603; iTF_00086778; iTF_00089229; iTF_01539972; iTF_00962181; iTF_00625831; iTF_01122760; iTF_00360585; iTF_01068649; iTF_01069323; iTF_01418059; iTF_01424717; iTF_00982638; iTF_00983316; iTF_00142161; iTF_00763569; iTF_00216066; iTF_00966338; iTF_00229033; iTF_00224234; iTF_00230988; iTF_00232300; iTF_00214701; iTF_00183632; iTF_00232912; iTF_00222867; iTF_00215380; iTF_00184277; iTF_00217429; iTF_00024953; iTF_00223551; iTF_00218784; iTF_00140946; iTF_00142760; iTF_00874131; iTF_00962867; iTF_01067283; iTF_00303476; iTF_00865684; iTF_00862952; iTF_00865001; iTF_00866382; iTF_00863634; iTF_00861560; iTF_00867064; iTF_00864315; iTF_00862239; iTF_00963544; iTF_01067960; iTF_01066619; iTF_00964797; iTF_01123357; iTF_01065918; iTF_01070020; iTF_01070733; iTF_00118359;
- 90% Identity
- iTF_00962181; iTF_00625831; iTF_01122760; iTF_00088461; iTF_00084962; iTF_01424717; iTF_00183632; iTF_00085841; iTF_00142161; iTF_00142760; iTF_00140946; iTF_00087603; iTF_00962867; iTF_00184277; iTF_00118359; iTF_00963544; iTF_00086778; iTF_00089229; iTF_00964797; iTF_01123357;
- 80% Identity
- -