Xvio003064.1
Basic Information
- Insect
- Xylocopa violacea
- Gene Symbol
- pnr
- Assembly
- GCA_963969225.1
- Location
- CAXAJV010000005.1:162849-164992[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-18 1.3e-14 53.7 3.2 1 34 216 248 216 250 0.97 2 2 9.7e-19 2e-15 56.3 6.2 1 35 270 303 270 304 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGCGGTGGTTACGGCACCGGCTCCGACTATCAGCAACAATCCCAGCAACAACAGcatcagcagcagcagcagcagcagcaacagcagcaacaacaacagcagcagcagcaacagcaacagcagcaacagcagcagcagcagcagcagcaacacggTCAACATCTTCAAACGCCCGTTTACGTTCCTTCTTCGAGGCCGACGATCCCGTCGGCAGCAAcggcagcggcggcggcggcggcggcggcgcagTATCACTCTTTCCCTGGATCCGGGTCGCCCGCCTGGGAGAAAACCGCGGCAGCGGCCTCGTGGCAGCATGGGGTGGAAACGTACGCGGCGCATCACGCGCTCGCGGGACACGCGAGCGGATCggccgcggcggcggcggctgcgGCGGCGGCCGCAGCCGCGATGGGTCCGCACGCGGGGCACGCGCACCCGCACCCGCACGCGGCCCATCCGCACACCGGACATCCGCACTCGAGCCTCGCCGCGGCCGCAGCCGCCCCGTTTTACGCGCAGAACGTCGCCATGATGTCCTCCTGGCGCGCCTACGACGGAGCCGGATTTCAACGGGCATCCCCTTACGATACCGCGATGGACTTTCAATTCGGCGAGGGTCGCGAGTGCGTCAACTGCGGCGCCATATCGACACCCCTCTGGAGGAGAGACGGCACCGGCCACTACTTGTGCAACGCGTGCGGACTCTATCACAAGATGAACGGGATGAACAGACCGCTGATAAAACCCTCGAAACGACTGACGGCTACCAGGCGACTGGGCCTCTGTTGCACGAATTGCGGCACCCGCACCACCACCCTCTGGAGGCGCAACAACGAGGGCGAGCCCGTCTGCAACGCTTGCGGTCTCTACTTCAAGCTGCACGGCGTGAACAGGCCGCTCGCCATGCGAAAGGACGGCATTCAGACGCGAAAACGAAAACCGAAGAAGACACCGGAACCGGGTAGCGCGAGACAGCAACAATCCGCCGTCGAACACGATACGACGGCCACCGTTTCCGCCGCTTCGTCTCCGTCCACGGAATTGAAAAGCAGTCAACAACAACAACAtcggcagcagcagcagcagcagcagcagcagcagcagcaacaacagcagcagcagcagcagcagcagcagcaacagcagcaacagcatCAGGTGGAGGCATCGAAATCGTCCGGTAACGCGTCCAGTTCGACGGAGAGACCCGTCTATCTCGGGCACACCTCCCTATTGGCAACCGGAAGCGTGGCTACCGTGAAAACGGAACCGCGAAGCTGCGACGGCATCGTCGGCCAGCCCTATTCTTCCTACTACCAGCATCCCCATCAGCTCGCGGTAGCGAGCGCCGAGCATCAACAGCAAACGTATTACGGAAGCCAGGACGCGCCTTATCATCACCAGCATCACGTGACCGCGGCCGCCAAACTGTTGGCATCGACGTAA
- Protein Sequence
- MFHGGGSGGYGTGSDYQQQSQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHGQHLQTPVYVPSSRPTIPSAATAAAAAAAAAQYHSFPGSGSPAWEKTAAAASWQHGVETYAAHHALAGHASGSAAAAAAAAAAAAAMGPHAGHAHPHPHAAHPHTGHPHSSLAAAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPGSARQQQSAVEHDTTATVSAASSPSTELKSSQQQQHRQQQQQQQQQQQQQQQQQQQQQQQQQQQHQVEASKSSGNASSSTERPVYLGHTSLLATGSVATVKTEPRSCDGIVGQPYSSYYQHPHQLAVASAEHQQQTYYGSQDAPYHHQHHVTAAAKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169532;
- 90% Identity
- -
- 80% Identity
- -