Lmar014461.2
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- pnr_1
- Assembly
- GCA_028455795.1
- Location
- CM052245.1:11033030-11035708[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-18 1.2e-14 53.8 3.2 1 34 176 208 176 210 0.97 2 2 8.8e-19 1.8e-15 56.4 6.2 1 35 234 267 234 268 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGTAGCGGTGGATACGGTGGTGCCAGTTCCGACTACCAACAGCAGTCTCAGCAACAACAGCAGCAACACGGCCAGCAACTCCAAGCGCCGGTGTATGTGCCCTCGTCGCGGCCGACCATTCCATCGGCAGCGACGGCGGCTGCGGCCGCCGCGGTTCAGTATCATTCGTTCCCCGGTTCCGGTTCACCCGCCTGGGAGAAGACGGCGGCCTCCTGGCAGCATGGAGTGGAGACGTACGCGGCTCATCACGCGCTCGCCGGACACGCGAGCGGATCCGCGTCGGCCGCAGCGTCGATCGCAGCTGCCATGGGCCCTCATTCGGGGCACGCGCACCCGCACGCGGGTCATCCGCACACCGGGCATCCGCACTCGAGCCTCGCCGCGGCCGCGCCCTTTTACGCTCAAAACGTCGCCATGATGTCGTCGTGGCGCGCGTACGACGGGGCAGGATTTCAACGGGCATCGCCTTACGACACCGCGATGGACTTCCAATTCGGCGAGGGTCGCGAGTGCGTCAACTGCGGCGCCATATCGACGCCACTTTGGAGAAGAGACGGGACCGGGCATTATCTGTGCAACGCGTGCGGACTGTACCACAAGATGAACGGGATGAACAGACCGCTGATCAAACCCTCGAAGAGATTGTCGACGTTTCAGACCGCGACCAGACGACTCGGACTCTGCTGTACGAACTGCGGGACCAGAACCACCACCCTTTGGAGGCGCAACAACGAGGGCGAGCCCGTCTGCAATGCTTGCGGCCTCTATTTTAAGCTGCACGGAGTGAACAGGCCGCTGGCCATGCGAAAGGACGGTATACAGACGCGAAAACGAAAGCCGAAGAAGACGCCGGAGCCGAACGTCAGACCATCCACCGGAGAACACGAGACCGCTACGGTTTCGACGGCCTCGTCTCCTTCCACGGaactgaaggctagccagcagcaacagcaacagcaacaacaacagcagcagcaacagcaacagcagcagcaacaacaacatcaacagcagcaacaatcacagcagcagcagcagcaacaacaacagcaacatcagatcgacggaacgaaatcgagcggcggagcctcgaGTTCGACCGACAGACCTGTGTACTTGGGACACACATCCCTGTTGGCGACCGGTAGCGTCGCAACCGTCAAGACGGAACCACGAAGTTGCGACGGCATCGTGGGTCAGCCTTACTCCTCGTATTATCAACATCCTCATCAGCTCGGCGTCTCGACCGGCGAGCATCAACAACAAACGTACTATGGAAGTCAAGAAGCGCCCTATCATCATCAGCATCACGTAACCGCCGCTGCCAAGTTGCTCGCGTCCTCGTAA
- Protein Sequence
- MFHGGGSGGYGGASSDYQQQSQQQQQQHGQQLQAPVYVPSSRPTIPSAATAAAAAAVQYHSFPGSGSPAWEKTAASWQHGVETYAAHHALAGHASGSASAAASIAAAMGPHSGHAHPHAGHPHTGHPHSSLAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLSTFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNVRPSTGEHETATVSTASSPSTELKASQQQQQQQQQQQQQQQQQQQQQHQQQQQSQQQQQQQQQQHQIDGTKSSGGASSSTDRPVYLGHTSLLATGSVATVKTEPRSCDGIVGQPYSSYYQHPHQLGVSTGEHQQQTYYGSQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169532;
- 90% Identity
- iTF_00024953;
- 80% Identity
- -