Cgig003324.1
Basic Information
- Insect
- Colletes gigas
- Gene Symbol
- pnr
- Assembly
- GCA_013123115.1
- Location
- WUUM01000002.1:2962673-2967095[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-18 7.7e-15 54.0 3.2 1 34 181 213 181 215 0.97 2 2 5.2e-19 1.2e-15 56.6 6.2 1 35 235 268 235 269 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGCGGTGGGTACGGTGCAAGTTCCGACTACCAGCAGCAGTcccagcagcaacaacagcagcaacacgGCCAGCAGCTCCAGGCGCCCGTCTACGTGCCATCCTCGAGGCCGACCATTCCATCGGCGGcgacggcggcggcggcggctgCAGCGGCGGCCGCCCAATACCATTCGTTCCCCGGTTCCGGCTCGCCCGCCTGGGAGAAGACAGCAGCTTCTTGGCAGCATGGAGTCGAGACGTACGCGGCCCACCACGCGCTCGCTGGCCACGCGAGCGGTTCCGCGTCCGCGGCCGCGGCTGCCGCAGCGGCAGCAGCGATGGGCCAACACTCTGGCCACGGTCATCCCCACGCCGGCCACCCTCACACAGGACACCCGCACTCGAGCCTCGCCGCTGCCGCGCCCTTCTACGCGCAGAACGTTGCCATGATGTCCTCCTGGCGCGCCTACGACGGAGCTGGATTTCAACGAGCATCGCCATACGACACAGCGATGGACTTTCAGTTCGGCGAGGGGCGCGAGTGCGTGAACTGCGGCGCGATCTCTACGCCGCTGTGGAGACGGGACGGCACCGGTCACTATCTGTGCAACGCGTGCGGACTGTATCACAAGATGAACGGAATGAACAGACCGTTGATCAAGCCCTCGAAACGGCTGACCGCGACCAGGCGGCTGGGACTGTGCTGCACGAATTGCGGGACCCGCACCACCACGCTCTGGAGGCGCAACAACGAGGGCGAGCCGGTCTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACGGGGTGAACAGACCGCTGGCGATGCGGAAGGACGGCATACAAACGCGGAAACGCAAACCGAAAAAGACGCCCGAACCAAACGCCAGACCCACCGCCGGGGACCACGAGGCAACCGCCGTCTCGACCGCCTCCTCGCCCTCGACGGACAGACCCGTCTACTTGGGGCACACGTCGCTGCTGGCGACCGGAAGCGTGGCTACGGTGAAGACGGAGCCCCGGAGCTGCGACGGTATCGTCGGGCAACCCTATTCCTCGTACTACCAGCATCATCCCCATCAGCTGGGCGTGTCGACCAGCGAGCACCAGCAACAGACTTATTACGGGAGCCAGGAGGCGCCCTATCATCATCAGCATCACGTGACGGCGGCCGCAAAACTGTTGGCGTCCTCGTAA
- Protein Sequence
- MFHGGGSGGYGASSDYQQQSQQQQQQQHGQQLQAPVYVPSSRPTIPSAATAAAAAAAAAAQYHSFPGSGSPAWEKTAASWQHGVETYAAHHALAGHASGSASAAAAAAAAAAMGQHSGHGHPHAGHPHTGHPHSSLAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARPTAGDHEATAVSTASSPSTDRPVYLGHTSLLATGSVATVKTEPRSCDGIVGQPYSSYYQHHPHQLGVSTSEHQQQTYYGSQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169532;
- 90% Identity
- iTF_00219476;
- 80% Identity
- -