Acer016691.1
Basic Information
- Insect
- Apis cerana
- Gene Symbol
- pnr
- Assembly
- GCA_029169275.1
- Location
- CM054910.1:10307516-10315312[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-18 1.6e-14 53.8 3.2 1 34 188 220 188 222 0.97 2 2 6.9e-19 2.4e-15 56.4 6.2 1 35 242 275 242 276 0.98
Sequence Information
- Coding Sequence
- ATGTTTCACGGGGGCGGAAGTAGCGGGTACGGCGCCAGCTCGGACTACCAACAGCAGtcgcagcaacagcagcaacagcaacacGGCCAGCAGCTTCAAGCGCCCGTCTACGTGCCGTCCTCGAGGCCTACGATCCCGTCCGCGGCCACAGCGGCGGCGGCCGCGGCCGCGGCCCAGTACCATTCCTTCCCCGGCTCTGGCTCGCCTGCTTGGGAGAAGACTGCTGCAGCAGCGGCCTCGTGGCAGCATGGGGTGGAAACGTACGCGGCCCATCACGCGCTCGCGGGGCACGCAAGCGGGTCCGCGGCCGCGGCCGCTGCCGCCGCTGCCGCGATGGGGCCGCACTCGGGCCACACGCACCCGCACCCGCACACGCACCCGCACGCGGCCCATCCGCACACCGGCCACCCTCACTCGAGCCTCGCCGCGGCCGCGGCCGCCCCCTTTTACGCGCAGAACGTCGCCATGATGTCCTCCTGGCGCGCCTACGACGGAGCCGGATTTCAACGTGCCTCCCCTTATGACACCGCGATGGATTTTCAATTCGGCGAAGGCCGGGAGTGCGTTAATTGCGGCGCGATATCGACGCCGCTCTGGAGGAGGGACGGGACCGGACATTATCTGTGCAACGCGTGCGGACTCTACCACAAGATGAACGGGATGAACAGGCCCCTGATAAAGCCGTCGAAGCGTTTGaCCGCGACCAGGCGGTTGGGGCTGTGCTGCACCAACTGCGGCACCCGCACCACCACCCTTTGGAGGCGCAACAACGAGGGCGAGCCCGTTTGCAACGCTTGCGGCCTCTACTTCAAGCTGCACGGCGTGAACAGGCCCCTGGCGATGCGGAAGGACGGCATCCAGACGCGGAAACGGAAGCCGAAGAAGACGCCCGAGCCGAACGCCAGGTCCTCCGCCGTCGAGCACGAGACCTCCGCCGCCGTCTCCGCCGCCTCTTCTCCCTCCACGGAATTAAAGGGTAaccaacaacagcaacagcagcaacagcaacagcagcaacaacagcagcagcagcagcaacatcAAATCGAGGTGTCCAAATCGTCCGCCGGTGGTGGCTCGAGCTCATCCGAGAGACCGGTTTATCTCGGGCACACGTCTCTTTTAGCGACAGGAAGCGTGGCCACCGTCAAAACGGAACCCCGAAGTTGTGATGGCATTGTTGGTCAACCCTACTCCTCGTATTATCAGCATCCGCATCAACTTGGGGTATCGAGCAGCGAGCACCAGCAACAGACTTATTACGGGAGTCAGGAAGCACCTTACCATCATCAGCATCACGTTACCGCGGCTGCCAAGTTATTGGCATCCACGTAA
- Protein Sequence
- MFHGGGSSGYGASSDYQQQSQQQQQQQHGQQLQAPVYVPSSRPTIPSAATAAAAAAAAQYHSFPGSGSPAWEKTAAAAASWQHGVETYAAHHALAGHASGSAAAAAAAAAAMGPHSGHTHPHPHTHPHAAHPHTGHPHSSLAAAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARSSAVEHETSAAVSAASSPSTELKGNQQQQQQQQQQQQQQQQQQQHQIEVSKSSAGGGSSSSERPVYLGHTSLLATGSVATVKTEPRSCDGIVGQPYSSYYQHPHQLGVSSSEHQQQTYYGSQEAPYHHQHHVTAAAKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169532;
- 90% Identity
- iTF_01169532;
- 80% Identity
- -