Pdar011235.1
Basic Information
- Insect
- Papilio dardanus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_013186455.1
- Location
- QDHC01001692.1:390383-424413[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-12 4.4e-09 36.0 0.0 1 38 308 346 308 352 0.91 2 2 3.9e-19 9.2e-16 57.4 0.0 1 43 513 556 513 558 0.95
Sequence Information
- Coding Sequence
- ATGTTAGAGGTCGAGCGTTGCATCCGTCCACGCATCGTCTCCCGAGATTTAACTGCGGTATCGGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCGTTAATACCAAAACGGAGCGACGAGGAACAGTCCAGCGACGAGGATACCACGCCTGCCACCGACCCCCCGCCCGCTCTCAAGATAAAGACCATCGAGGAGATCAACGCGCCCGACGAGACCAGGGCAGGGGACGAGATGAGGGCTGGGCTCGAGAACAGGGCAGGGGACGAGACGAGAGTGGGGAACGAGAGCGGGGCGAAATCCGGGCGACAGGAGACGATATTAGAGAGTCTCATCAAACGGCCCGCGACGCAGCCCAAGCTAGAATTGCCAGAAGAGCCGGCAGATTGGAAGCCCCCGGAGAAGTGCTACTTCTGCGTGGACGGGGCTGAGCAGCCGCCCGCCGACTCCAGACCAGCGCCAACGagTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCCCGCAGCCCGGCCGGCGCACCACCGCTCTTACAGCAAATGTTGCAACTGCAACTTCAGGCGCAGACACCACAGGCCATTGCACAGTTCCAGCAGATGCTGGCGGCGCTGGCGGCGCTGGGCAGCGGGCTGGTGCCGCCGCCGCTCCCGCAGGCCTGGCTCATGCAGCGGCTAGCGCAGACCAGGCAACAACCTGACAGACTGGCTGAATGCGAAAAGCCGCCAGCGCCAACTTCATCACCAATATCAGCTGAACAACCGCTCGACCTGAGCGCCAAATCCACGTCCAGTACAAGCGGAACACCACCTCCGGACCATAACAACTTGGACAACTCCAGGTTAAAACGCGCGGTGTCGGACAATGCCAACAACGTGTCACGGCGGACGTACTCCGAAGAGGAGCTGCAGTCCGCGCTGCGCGACATCCAGTCGGGCCGGCTGGgcacgcgccgcgccgccgccctcTACCGGATACCGCGCTCCACACTGCGCAACAAGATCAACAAGTGCGGCATCCCCACCGACCTCGCGCACGACTCCGACCCCGACAGCGAGCCCGAGCGGACAGACTCGCCGCCCTCCGTCATACTCAAGATACCCACCTTCCCACCTCCCGACGACAAGAGCCCCTCGCCTGCGACACCCGTCACGCCCGTTACCCCACTCCTCGCGCCGCCTCAGCCGCAGCTCAACCAGGCCTCCCAGCTGCTCCTGCCTTCGGTCTTTGCCGACCCACCCTCCACGCAACACCTGTTTACGTCCCTGAGCGACGTCATAGCTAAAAGTATAAGCCAGAAATTCCAGCAGCCTCTCGAAAGGCCACCGCAGTCCGACCTACCGTTCATGCGCGCGCCCGACAGGCACGTGTCGGTCATCAAGACGCCGCCGGACAACCAGAGGAACTATCCGGCGCCGAGCAACTCCCGCGCTACCACCAACAACAACGGCCAACCGGCGGCCGGCGGCAAGGGCACGCGTCCTAAGCGAGGAAAATACAGGAATTACGATAGAGACAGCCTGGTTGAGGCGGTGAAGGCGGTGCAGCGGGGGGAGATGTCGGTGCACCGGGCCGGCTCCTACTACGGCGTGCCCCACTCCACCCTGGAGTACAAGGTCAAGGAGCGGCATCTGATGCGGCCTAGAAAGAGGGAGCCCAAGCCGCAGCAGGAAGCGAAGCCGCAGCCCAAGCCACCGCCGAAGCCTCCAACCAAACCCTTCACGAACGGACTCAACGGGCCCGAAGCCTACCCCTCGGGCTACCCGTTTTGGGCGGGGGGGTTCgccccgccgcccgcgccaGACCTCTACGCCTCGCACATGATGCGGCGATTGCGCGACGAGGCGCCGCCCGCGAACGGTTCCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGA
- Protein Sequence
- MLEVERCIRPRIVSRDLTAVSGLERVAEELMGRRKWKLYQDALIPKRSDEEQSSDEDTTPATDPPPALKIKTIEEINAPDETRAGDEMRAGLENRAGDETRVGNESGAKSGRQETILESLIKRPATQPKLELPEEPADWKPPEKCYFCVDGAEQPPADSRPAPTSPASESDSSSVSGARSPAGAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLMQRLAQTRQQPDRLAECEKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRLKRAVSDNANNVSRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKCGIPTDLAHDSDPDSEPERTDSPPSVILKIPTFPPPDDKSPSPATPVTPVTPLLAPPQPQLNQASQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQSDLPFMRAPDRHVSVIKTPPDNQRNYPAPSNSRATTNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPPPKPPTKPFTNGLNGPEAYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_01149521; iTF_01148753; iTF_01144476; iTF_01148029; iTF_01147327; iTF_01145216;
- 80% Identity
- -