Pmac013372.1
Basic Information
- Insect
- Papilio machaon
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001298355.1
- Location
- NW:108141-270214[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-12 3.8e-09 35.7 0.0 1 38 361 399 361 405 0.91 2 2 6.4e-19 8e-16 57.1 0.0 1 43 566 609 566 611 0.95
Sequence Information
- Coding Sequence
- ATGGACAAATACTGGTCGTGTTTAACAAGATCGCCAAATCTACATGGTGGCTGGCACGCATCAACAATTTGCGAACGCAGTTTAATTCCTCCACGGCATGTATTAATCACTAAGgTTCGCTCGTATGCCATGGCGGAGTGCTCTTTCGCGCGCTGTCAGCAGGAACGTCGCGCCATTCGCAAGGAGCTGCAACGCTGGACCAAGAACATGGTTTATATACTCGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCGTTAATACCAAAACGGAGCGACGGGGAACAGTCCAGCGACGAGGATACCACGCCTTCTACCGACCCCCCGCCCGCTCTCAAGATAAAGACCATCGAGGAGATCAACGCGCCAGACGAGACCAGGGCAGGGGACGACACGAGGGCTGGGCTCGAGAGCAGGGCAGGGGACGAGACGAGAGCCCGGGAGGAGGGCGGGGTGAAGACCGGCCGACCGGAGACGATACTGGAGAGCCTCATAAAACGGCCCGCGACGCAGCCCAAACTCGAGCTGCCAGAAGAGCCGGCGGACTGGAAGCCCCCGGAGAAGTGCTACTTCTGCGTGGACGGGGCTGAGCAGCCCGCCGCCGACACCCGACCCGCGCCTACGAGTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCTCGCAGCCCGGCAGCCGCGCCGCCGCTGCTGCAGCAAATGCTGCAGCTCCAGCTACAAGCACAGACCCCGCAGGCGATTGCACAGTTCCAGCAGATGCTGGCGGCGCTAGCGGCTTTGGGCAGCGGGTTGGTGCCGCCGCCGCTGCCGCAGGCCTGGCTCATACAGCGGCTCGCGCAGAACAGGCAACAACCAGACAGGCTGGCTGAATGCGACAAGCCACCAGCGCCTACGTCATCGCCAATATCAGCGGAACAACCACTCGACCTGAGCGCCAAGTCTACGTCCAGCACGAGTGGCACACCGCCCCCGGATCACAACAATTTGGACAATTCCAGATTAAAACGTGCGGTGTCGGAGAACGCCAACAATGCGTCCCGGCGGACGTACTCTGAGGAGGAGCTGCAGTCGGCGTTGCGTGACATCCAGTCGGGCCGACTGGGcacgcgccgcgccgccgccctCTACCGGATACCGCGCTCCACCCTGCGCAACAAGATCAACAAGTGCGGCATCCCCACCGACCCCACGCACGACTCCGACCCCGACAGCGAGCCCGAGCGGACCGACTCGCCGCCTTCCGTCATACTGAAAATACCCACCTTCCCGCCCCCGGACGAGAAGAGCCCCTCACCCGCGACGCCCGTCACCCCCATCACCCCGCTCATACCGCCGCCGCAGGCGCCGCTCAACCAAGCCTCGCAACTTCTTCTCCCGTCGGTCTTCGCCGACCCACCCTCCACCCAACACCTATTTACGTCCTTGAGCGACGTCATAGCTAAAAGTATTAGCCAGAAATTCCAGCAGCCTCTGGAGAGGCCATCGCAGCCCGACCTGCCCTTCATGCGCGCACCCGACAGACATGTATCGGTCATAAAGACGCCGCCCGATAACCAGAGGAACTACCCGGCGCCGAGCAATTCGCGCGCCGCCACCAACAACAACGGCCAGCCGGCAACCGGCGGCAAGGGCACGCGCCCCAAGCGAGGCAAATACAGGAACTATGACAGGGACAGCCTTGTCGAGGCGGTGAAGGCCGTGCAGCGGGGGGAGATGTCGGTGCACCGGGCGGGCTCCTACTACGGCGTGCCTCACTCCACCCTGGAGTACAAGGTTAAGGAGCGACATCTAATGCGACCGCGGAAGAGGGAGCCCAAGCCGCAGCAGGAAGCAAAGCCGCAACCCAAGCCGCCGCCGAAGCCTCCCACCAAACCTTTTACGAACGGACTTAATGGGCCAGAAGCATACCCCTCGGGCTATCCGTTCTGGGCGGGGGGGTTTGCTCCTCCGCCCGCGCCTGACCTCTACGCCTCACACATGATGCGGCGACTGCGCGACGAGGCGCCGCCCGCGAACGGCTCCTTCCTCGAGGGAATCATTAGATCGAGCCTGGAAAGGCCGCTGATCCAGCGATTGGCGGAGCCGCGAGCGCCGATGCCGACGAGCGAGGCGCCCAGCCTGTTGCGGCGGCTGGCCGGCGAGCCCGATGAGCCGCCACCCGCACGTCGGCCGCGCATCGACAGTTCGGATCGGCAGCTGGCCGCGGAGATGCGAGAGGCGGTGCAGCGACTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACACCCACACCGCCAGCCGGCTCGCCGCCGCCACCGCCCGCCGCGACGACAGCGCCGCCCGATCACGTTTAG
- Protein Sequence
- MDKYWSCLTRSPNLHGGWHASTICERSLIPPRHVLITKVRSYAMAECSFARCQQERRAIRKELQRWTKNMVYILGLERVAEELMGRRKWKLYQDALIPKRSDGEQSSDEDTTPSTDPPPALKIKTIEEINAPDETRAGDDTRAGLESRAGDETRAREEGGVKTGRPETILESLIKRPATQPKLELPEEPADWKPPEKCYFCVDGAEQPAADTRPAPTSPASESDSSSVSGARSPAAAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQNRQQPDRLAECDKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRLKRAVSENANNASRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKCGIPTDPTHDSDPDSEPERTDSPPSVILKIPTFPPPDEKSPSPATPVTPITPLIPPPQAPLNQASQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPSQPDLPFMRAPDRHVSVIKTPPDNQRNYPAPSNSRAATNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPPPKPPTKPFTNGLNGPEAYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLIQRLAEPRAPMPTSEAPSLLRRLAGEPDEPPPARRPRIDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAGSPPPPPAATTAPPDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_01140144;
- 80% Identity
- -