Ppol002049.1
Basic Information
- Insect
- Papilio polyxenes
- Gene Symbol
- Mblk-1
- Assembly
- GCA_026167825.1
- Location
- JAOPJD010000017.1:2297324-2329285[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-12 5.4e-09 36.1 0.0 1 38 206 244 206 250 0.91 2 2 4.9e-19 1.1e-15 57.5 0.0 1 43 411 454 411 456 0.95
Sequence Information
- Coding Sequence
- ATGCTTTTCGTACTGCTCTTTGTAGTTGTCTGCACCTGCTGGGCAGGGAGCCTCATAAAACGGCCCGCGACGCAGCCCAAACTCGAGCTGCCAGAAGAGCCGGCGGACTGGAAGCCCCCGGAGAAGTGCTACTTCTGCGTGGACGGGGCTGAGCAGCCCGCCGCCGACAACCGACCCGCGCCTACGAGTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCTCGCAGCCCGGCAGCCGCGCCGCCGCTGCTGCAGCAAATGCTGCAGCTCCAGCTACAAGCACAGACCCCGCAGGCCATTGCACAGTTCCAGCAGATGCTGGCGGCGCTAGCGGCTCTGGGCAGCGGGTTGGTGCCACCGCCGCTGCCGCAGGCCTGGCTCATACAGCGGCTCGCGCAGAACAGGCAACAACCAGACAGGCTGGCTGAATGCGACAAGCCACCAGCGCCGACGTCATCGCCAATATCAGCGGAACAACCACTCGACCTGAGCGCCAAGTCTACGTCCAGCACGAGTGGCACACCGCCCCCGGATCACAACAACTTGGACAATTCCAGATTAAAACGTGCGGCGTCGGACAACGCCAACAATGCGTCGCGGCGGACGTACTCTGAGGAGGAGCTGCAGTCGGCGTTGCGTGACATCCAGTCGGGCCGACTGGGCACGCGCCGCGCCGCCGCCCTCTACCGGATACCGCGCTCCACCCTGCGAAACAAGATCAACAAGTGCGGCATCCCCACCGACCCCACGCACGACTCCGACCCCGACAGCGAACCCGAGCGGACCGACTCGCCGCCTTCCGTCATACTGAAAATACCCACCTTCCCGCCCCCGGACGAGAAGAGCCCCTCACCCGCGACGCCCGTCACCCCCATCACCCCGCTCATACCGCCGCCGCAGGCGCCGCTCAACCAGGCCTCGCAACTTCTCCTCCCGTCGGTCTTCGCCGACCCACCCTCCACCCAACACCTATTTACGTCCTTGAGCGACGTCATAGCTAAAAGTATTAGCCAGAAATTCCAGCAGCCTCTGGAGAGGCCATCGCAGCCCGACCTGCCCTTCATGCGCGCACCCGACAGACATGTATCGGTCATAAAGACGCCGCCCGATAACCAGAGGAACTACCCGGCGCCGAGCAACTCGCGCGCCGCCACCAACAACAACGGCCAGCCGGCAACCGGCGGCAAGGGCACGCGCCCCAAGCGAGGCAAATACAGGAACTACGACAGGGACAGCCTTGTCGAGGCGGTCAAGGCAGTGCAGCGGGGAGAGATGTCGGTGCACCGGGCAGGCTCCTACTACGGCGTGCCTCACTCCACCCTGGAGTACAAGGTCAAGGAGCGACATCTAATGCGACCGCGGAAGAGGGAGCCCAAGCCGCAGCAGGAAGCAAAGCCGCAACCCAAGCCGCCGCCGAAGCCTCCCACCAAACCTTTTACGAACGGACTTAATGGGCCAGAAGCGTACCCCTCGGGCTATCCGTTCTGGGCGGGGGGGTTTGCTCCTCCGCCCGCGCCTGACCTCTACGCCTCACACATGATGCGGCGACTGCGCGACGAGGCGCCGCCCGCGAACGGCTCCTTCCTCGAGGGAATCATTAGATCGAGCCTGGAAAGGCCGCTGATCCAGCGATTGGCGGAGCCGCGAGCGCCGATGGCGACGACCGAGGCGCCCAGCTTGTTGCGGCGGCTGGCCGGCGAGCCCGATGAGCCGCCACCCGCGCGTCGGCCTCGCATCGACAGTTCGGATCGGCAACTGGCTGCGGAGATGCGAGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCACGCAACGGCACACCTACACCGCCAGCCGGCTCGCCGCCGCCACCGCCCGCCGCGACGACAGCGCCGCCCGATCACGTTTAG
- Protein Sequence
- MLFVLLFVVVCTCWAGSLIKRPATQPKLELPEEPADWKPPEKCYFCVDGAEQPAADNRPAPTSPASESDSSSVSGARSPAAAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQNRQQPDRLAECDKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRLKRAASDNANNASRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKCGIPTDPTHDSDPDSEPERTDSPPSVILKIPTFPPPDEKSPSPATPVTPITPLIPPPQAPLNQASQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPSQPDLPFMRAPDRHVSVIKTPPDNQRNYPAPSNSRAATNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPPPKPPTKPFTNGLNGPEAYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLIQRLAEPRAPMATTEAPSLLRRLAGEPDEPPPARRPRIDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAGSPPPPPAATTAPPDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_01140144;
- 80% Identity
- -