Pmem013674.1
Basic Information
- Insect
- Papilio memnon
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003118335.3
- Location
- JAOPJP010000017.1:1709872-1723022[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-12 4.2e-09 36.3 0.0 1 38 150 188 150 194 0.91 2 2 3.6e-19 9.1e-16 57.6 0.0 1 43 355 398 355 400 0.95
Sequence Information
- Coding Sequence
- ATGAACGTTTTGTTACAGAGTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCTCGCAGCCCGGCCGCTGCGCCGCCGTTGCTGCAGCAGATGCTGCAACTACAGCTGCAGGCACAGACCCCACAGGCCATTGCACAGTTCCAGCAGATGCTGGCGGCGCTGGCGGCGTTAGGCAGCGGACTGGTGCCGCCGCCGCTGCCGCAGGCCTGGCTCATACAACGACTCGCGCAGACCAGGCAACAACCGGACAGGCTGGCTGAATGCGACAAGCCGCCAGCGCCGACTTCATCGCCGATATCAGCGGAGCAACCGCTGGACCTGAGCGCCAAGTCCACGTCCAGTACGAGCGGAACCCCGCCTCCGGATCACAATAATTTGGATAATTCCAGATTAAAACGCGCGGTGTCGGATAACGCCAACAACTCGTCGCGGCGGACGTATTCCGAGGAGGAGCTGCAGTCGGCGCTGCGCGACATCCAGTCGGGCCGGCTGGGCACGCGTCGCGCCGCAGCCCTCTACAGGATACCGCGCTCAACGTTGCGCAATAAAATCAATAAGTTCGGCATCTCCACCGACCCCGCGCACGACTCAGATCCCGATAGCGAGCCCGAGCGGACCGAGTCACCACCTTCCGTTATACTTAAAATACCCACCTTCCCGCCCCCGGAAGAGAAGAGCCCGTCTCCCGCGACGCCCGTCACCCCCATCACCCCGCTCTTACCGCCGCCCCAGCCGACGCTCAACCCGGCCTCACAACTTCTTCTCCCGTCGGTCTTCGCCGATCCACCCTCCACCCAACATCTGTTTACGTCCCTCAGCGACGTCATAGCTAAAAGTATAAGCCAGAAATTCCAGCAGCCTCTAGAGAGGCCGCCGCAACCCGATATGCCCTTCATGCGTGCTCCCGACAGACACGTGTCGGTCATAAAGACGCCACCAGACAACCAGAGGAACTACCCGTCGCCGAGCAACTCACGTGCCGCTACCAACAACAACGGCCAACCTGCGGCCGGCGGCAAGGGCACGCGCCCCAAACGAGGCAAATACAGAAACTACGACAGGGACAGCCTCGTTGAGGCGGTGAAGGCCGTGCAGCGGGGGGAGATGTCTGTACATCGTGCGGGCTCTTACTACGGCGTGCCCCACTCCACCCTGGAATACAAGGTCAAGGAGCGACATCTGATGCGGCCGAGAAAAAGAGAGCCCAAGCCGCAGCAGGAAGTAAAGCCGCAACCCAAACCGCAGCCGAAGCCTCCCACCAAACCCTTCACGAACGGGCTCAACGGGCCCGAAGCTTACCCTTCAGGGTATCCATTCTGGGCGGGGGGATTCGCCCCACCGCCCGCGCCGGACCTCTACGCCTCGCACATGATGCGGCGATTGCGTGACGAGGCGCCGCCTGCGAACGGATCCTTCCTCGAGGGGATCATTAGGTCGAGCCTGGAGAGGCCGCTAATCCAGCGGCTGGCGGAGCCGCGGGCGCCGATGGCGACGAGCGAGGCACCCAGCCTGCTGCGGCGGTTGGCAGGTGAGCCAGAGGAGCCGCCGCCAGCGCGCCGTCCGCGCATCGACAGTTCGGACAGGCAACTGGCGGCGGAGATGCGTGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTAAGGCCGCGCAACGGCACGCCCACGCCGCCTGCCGGCTCGCCGCCGCCGCTGCCGCCCGCTGCGCCAGCCGCGCCGCCCGCGCCGCCCGATCACGTGTAG
- Protein Sequence
- MNVLLQSPASESDSSSVSGARSPAAAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQTRQQPDRLAECDKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRLKRAVSDNANNSSRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKFGISTDPAHDSDPDSEPERTESPPSVILKIPTFPPPEEKSPSPATPVTPITPLLPPPQPTLNPASQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQPDMPFMRAPDRHVSVIKTPPDNQRNYPSPSNSRAATNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPKPQPKPPTKPFTNGLNGPEAYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLIQRLAEPRAPMATSEAPSLLRRLAGEPEEPPPARRPRIDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAGSPPPLPPAAPAAPPAPPDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_01140144;
- 80% Identity
- -