Ppol010185.1
Basic Information
- Insect
- Papilio polytes
- Gene Symbol
- Mblk-1
- Assembly
- GCA_000836215.1
- Location
- NW:750629-912718[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-12 3.1e-09 35.8 0.0 1 38 318 356 318 362 0.91 2 2 2.2e-19 6.5e-16 57.2 0.0 1 43 523 566 523 568 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAGTGCTCTTTCGCGCGCTGTCAGCAGGAACGTCGCGCCATACGCAAGGAGCTGCAGCGCTGGACAAAGAACATGGTCTACATACTAGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCGTTAATACCAAAACGGAGCGACGGGGAACAGTCCAGCGACGAGGATACCACGCCTGCCACCGACCCCCCGCCCGCTCTCAAGATAAAGACCATCGAGGAGATCAACGCGCCCGACGAGACCAGGGCAGGGGAGGAGACGAGGGCTGGGCTCGAGAACAGGGCAGGGGACGAGACGAGAGCGCGGGAGGACAGTGGAACGAAGACCGGCCGTCCGGAGACGATACTGGAGAGCCTCATCAAACGGCCAGCGACGCAGCCCAAACTCGAGCTGCCAGAAGAGCCGGCAGACTGGAAGCCCCCGGAGAAGTGTTACTTCTGTGTCGACGGGGCTGAGCAGCCCTCTGCCGACTCCAGAGCTGCGCCTACGAGTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCTCGTAGCccggccgccgcgccgccgctgcTGCAGCAAATGCTGCAGTTACAGCTACAAGCACAGACCCCGCAGGCCATTGCACAGTTCCAGCAGATGCTGGCGGCGCTGGCGGCGTTAGGCAGCGGGCTTGTGCCGCCGCCGCTGCCGCAAGCCTGGCTTATACAGCGACTCGCCCAGACCAGGCAACAACCAGACAGGCTGGCTGAATGCGACAAGCCGCCAGCGCCGACCTCATCGCCGATATCGGCCGAGCAACCGCTGGACCTGAGCGCAAAATCCACGTCCAGCACGAGCGGCACCCCGCCCCCGGACCACAATAACTTGGATAATTCCAGATTAAAACGCTCGGTGACGGACAACGCTAACAACGTATCGCGGCGGACGTACTCCGAGGAGGAGCTGCAGTCAGCACTGCGCGACATCCAGTCGGGTCGACTGGGCACACGCCGCGCCGCTGCCCTCTACAGGATACCGCGCTCCACGCTACGCAATAAGATCAACAAGTGCGGCATCCCCACCGACCCGTCGCACGACTCCGACCCCGACAGCGAGCCCGAGCGAACCGACTCACCACCTTCCGTTATACTCAAGATACCCACCTTCCCGCCACCGGACGAGAAGAGCCCGTCCCCCGCGACGCCCGTCACCCCCATCACCCCGCTCATACCCCCGCCCCAGCCGACGCTCAACCAGGCCTCGCAACTTCTCCTCCCGTCGGTCTTCGCTGACCCACCCTCTACCCAACATCTATTTACATCCCTTAGCGACGTCATAGCTAAAAGTATCAGTCAGAAATTCCAGCAGCCTCTAGAGAGGCCGCCGCAACCCGACCTACCCTTCATGCGCGCGCCCGACAGGCACGTGTCGGTCATAAAGACGCCACCAGACAATCAGAGGAATTACCCGGCGCCGAGTAACTCGCGCGCCGCTACCAACAACAACGGACAACCGGCGGCCGGCGGAAAGGGCACGCGCCCCAAGCGAGGCAAATACAGGAACTACGACAGGGACAGTCTCGTCGAGGCGGTGAAAGCCGTGCAGCGGGGGGAGATGTCGGTGCACAGGGCGGGTTCCTACTACGGCGTACCCCATTCCACTTTGGAGTACAAAGTGAAGGAGCGACATTTAATGCGGCCGAGAAAAAGGGAGCCAAAGCCGCAGCAGGAAGCAAAGCCGCAACCCAAACCACCGCCGAAGCCTCCAACTAAACCTTTCACGAACGGGCTCAATGGGCCAGAAGCCTATCCTTCGGGGTACCCGTTCTGGGCGGGGGGGTTCGCCCCTCCACCAGCACCAGACCTCTACGCCTCTCACATGATGAGGCGATTGCGCGACGAAGCGCCGCCTGCGAACGGATCCTTCCTCGAGGGTATCATAAGGTCGAGCCTGGAGAGACCGCTGATCCAGCGGCTGGCGGAGCCACGGGCGCCGATGGCGACGAGCGAGGCACCCAGTCTGCTGCGGCGGCTGGCTGGCGAGCCCGAGGAGCCGCCGCCCGCGCGTCGGCCGCGTATCGATAGCTCGGACCGGCAGCTGGCGGCAGAGATGCGTGAGGCGGTGCAGCGGCTACGTGCCGACAAGCTGCGGCCGCGCAATGGCACGCCCACGCCGCCTGCCGGctcgccgccgccgctgccgcccgccgcgccgcccgcgccgcccgaTCACGTGTAG
- Protein Sequence
- MAECSFARCQQERRAIRKELQRWTKNMVYILGLERVAEELMGRRKWKLYQDALIPKRSDGEQSSDEDTTPATDPPPALKIKTIEEINAPDETRAGEETRAGLENRAGDETRAREDSGTKTGRPETILESLIKRPATQPKLELPEEPADWKPPEKCYFCVDGAEQPSADSRAAPTSPASESDSSSVSGARSPAAAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQTRQQPDRLAECDKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRLKRSVTDNANNVSRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKCGIPTDPSHDSDPDSEPERTDSPPSVILKIPTFPPPDEKSPSPATPVTPITPLIPPPQPTLNQASQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQPDLPFMRAPDRHVSVIKTPPDNQRNYPAPSNSRAATNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEAKPQPKPPPKPPTKPFTNGLNGPEAYPSGYPFWAGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLIQRLAEPRAPMATSEAPSLLRRLAGEPEEPPPARRPRIDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAGSPPPLPPAAPPAPPDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_01140144;
- 80% Identity
- -