Ppro005939.1
Basic Information
- Insect
- Papilio protenor
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029286645.1
- Location
- JAGSMZ010000010.1:2245150-2275652[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-12 6.4e-09 35.9 0.0 1 38 293 331 293 337 0.91 2 2 4.7e-19 1.3e-15 57.3 0.0 1 43 498 541 498 543 0.95
Sequence Information
- Coding Sequence
- ATGTTTATGTTGAAGTCAAGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATATCAGGACGCGTTAATACCAAAACGGAGCGACGGGGAACAGTCCAGCGACGAGGATACCACGCCTGCCACCGACCCCCCGCCCGCTCTCAAGATAAAGACCATCGAGGAGATCAACGCGCCCGACGAGACCAGGGCAGGGGAGGAGACGAGGGCTGGGCTCGAGAGCAGGGCAGGGGACGAGACGAGAACCCGGGAGGACAGTGGAGCGAAGACCGGCCGGCCGGAGACGATACTGGAGAGCCTCATCAAACGGCCAGCGACGCAGCCCAAGCTCGAGCTGCCAGAAGAGCCGGCAGACTGGAAGCCCCCGGAGAAGTGTTACTTCTGTGTCGACGGGGCTGAGCAGCCTTCAGTCGACTCACGAGCTGCGCCCACGAGTCCAGCGTCGGAGTCGGATAGTAGTTCAGTGTCGGGCGCTCGCAGCccggccgccgcgccgccgctgcTGCAGCAAATGCTGCAGTTACAGCTTCAGGCACAGACCCCGCAGGCCATTGCCCAGTTCCAGCAGATgctggcggcgctggcggcgttAGGCAGCGGGCTGgtgccgccgccgctgccgcaaGCCTGGCTCATACAACGACTCGCGCAGACCAGGCAACAACCAGACAGACTGGCTGAATGCGACAAGCCGCCAGCGCCGACCTCATCGCCGATATCGGCCGAGCAACCCTTAGACCTGAGCGCAAAGTCCACGTCCAGCACGAGCGGCACCCCGCCCCCGGACCACAACAACTTGGATAATTCCAGATTAAAACGCTCGGCGACGGACAACGCCAACAACGTGTCGCGGCGGACGTACTCCGAGGAGGAGCTGCAGTCAGCACTGCGCGACATCCAGTCGGGTCGGCTGGGCACGCGTCGCGCCGCCGCCCTCTACAGGATACCGCGCTCCACGCTACGCAATAAGATCAACAAGTGCGGCATCCCCACCGACCCGTCGCACGACTCCGAACCCGACAGCGAGCCCGAGCGGACCGACTCGCCACCTTCCGTTATACTCAAGATACCCACCTTCCCGCCACCGGACGACAAGAGCCCGTCCCCCGCGACGCCCGTCACCCCCATCACCCCGCTCTTACCGCCGCCGCAGCCGACGCTCAACCCGGCCTCACAACTTCTTCTCCCGTCTGTCTTCGCCGATCCACCTTCCACCCAACATCTGTTTACGTCCCTCAGCGACGTCATAGCTAAAAGTATAAGCCAGAAATTCCAGCAGCCTTTGGAGAGGCCGCCGCAACCCGATCTGCCCTTCATGCGTGCTCCCGACAGACACGTGTCGGTCATAAAGACGCCACCAGACAACCAGAGGAATTACCCGGTGCCGAGTAACTCGCGCGCCGCCACCAATAACAACGGCCAACCGGCGGCCGGCGGAAAGGGCACGCGCCCCAAACGAGGCAAATACAGGAACTACGACAGGGACAGCCTCGTTGAGGCGGTGAAGGCTGTGCAGCGGGGGGAGATGTCGGTGCACAGGGCGGGTTCCTACTACGGCGTGCCCCACTCCACTCTGGAGTACAAGGTAAAGGAACGACATCTGATGCGGCCGAGAAAAAGGGAGCCAAAGCCGCAGCAGGAAGTGAAGCCGCAACCCAAACCGCAGCCGAAGCCTCCCACCAAACCCTTCACGAACGGGCTCAATGGGCCAGAAGCCTACCCTTCGGGGTACCCGTTCTGGGCGGGGGGGTTCGCCCCTCCACCGACGCCAGACCTCTACGCCTCTCACATGATGAGGCGATTGCGCGACGAGGCGCCGCCTGCGAACGGATCCTTCCTCGAGGGTATCATTAGGTCAAGCCTGGAGAGACCGCTGATCCAGCGGCTGGCGGAGCCACGGGCGCCGATGGCGACGAGCGAGGCACCCAGCCTGCTGCGGCGGCTGGCTGGCGAGCCCGAAgagccgccgcccgcgcgTCGGCCGCGCATCGACAGCTCGGACCGGCAGCTGGCAGCAGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTCCGGCCGCGCAATGGCACGCCCACGCCGCCGGCCGGATCGCCGCCACCgctgccgcccgccgcgccgcccgcgccgcccgatcACGTGTAG
- Protein Sequence
- MFMLKSSLERVAEELMGRRKWKLYQDALIPKRSDGEQSSDEDTTPATDPPPALKIKTIEEINAPDETRAGEETRAGLESRAGDETRTREDSGAKTGRPETILESLIKRPATQPKLELPEEPADWKPPEKCYFCVDGAEQPSVDSRAAPTSPASESDSSSVSGARSPAAAPPLLQQMLQLQLQAQTPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQTRQQPDRLAECDKPPAPTSSPISAEQPLDLSAKSTSSTSGTPPPDHNNLDNSRLKRSATDNANNVSRRTYSEEELQSALRDIQSGRLGTRRAAALYRIPRSTLRNKINKCGIPTDPSHDSEPDSEPERTDSPPSVILKIPTFPPPDDKSPSPATPVTPITPLLPPPQPTLNPASQLLLPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPPQPDLPFMRAPDRHVSVIKTPPDNQRNYPVPSNSRAATNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPKPQPKPPTKPFTNGLNGPEAYPSGYPFWAGGFAPPPTPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPLIQRLAEPRAPMATSEAPSLLRRLAGEPEEPPPARRPRIDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPAGSPPPLPPAAPPAPPDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01149521;
- 90% Identity
- iTF_01140144;
- 80% Identity
- -