Olat008775.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- PAXBP1
- Assembly
- GCA_948474745.1
- Location
- OX419685.1:17976455-17999521[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-14 2.4e-10 40.8 0.0 3 190 517 684 515 693 0.73
Sequence Information
- Coding Sequence
- ATGTCGTTGTTTCGAAAGCCGAAAAAGATTCAGCGTCGGGTGTTCTGTGCTGATGATGACGAGGACGGGGGGGAGCCCGAGGCTCCGCCGCCGCCAGTCATCAGCCAAGAAAAGGAGAAAAAGGAACCGAAGTCTTCCAAGAAAACTGCTCTGTTGAGTTTCGCTGACGAAGAAGAAGAAGTGGAAGTGTTCAAAGTCAAGAAGTCTTCTCAAAGTAAGAGATTAGCCAAGAAGCGTGAGAAAGAGAAGCAGAAACGTGATGTGAGAACTGATGGTGATAATAACAAATATGACCCTATCATTATTGAGGACGACCATACTGAGCTCAACAACGACAAACCCAAGCCAAAGAAGAAGGTGACATTAGAGGGGCTGATACTGTCCGGTCGGGAGGCGCTGGCGGCTGACGGGGCGGGAGATGTCTCCGACGAGAGTGCGCCCGAGGAGGATGACGCTGATGAGGACGACAGGGGGTTCCATCGGTACCGCGCCGACTCCGTGAGGGCCGCGCTGTTGGGCGCGCCGGGCCGCATTCCCGACGCTGCGCTCATTCACGCCGCACGCAAGACGAGACAGCAGGCTCGCGAGTTGGGCGGAGCCACCGCCGGCGCAGATTACATTCCCGTGAAGTCCGAGTCCGCACCGGGATCCCGGTTGGTGCGGGATGACGGATCCGGCGACGATGAAGAGGAAGGCCGGATTCATGTCAGGGGACTGGACTTGCCCAGTGATAAGCCTAAACGCGGCACAGCAGCAGTTTCGGAAGAGGAGCTGGACAGCGAGTCGGAGGAGTGGGTGGAACAACAGCTGCAGAAGGCACGGCCCGTCCTCGTGGATCTGACTGGTGAAGCAGCAATAGAAGTGAATCCATTCTCGGTAGCCTTGCCGCCGCCTCAGATGTCTGCGCCCGAACACTTGCGACCTCTCACGACGGGCTCACAGCCACCCGCGACTGCCAACGAACTGGTGGAGGCGCTTAGGAAACGGTTAGGAGAGCTCCAAGTAGAACGCGAATCGACATCAGAAACCCAAAAGGACCTTCGCGAGAGGTTGCTTACTTCGGCCAGAATACGCGAGAGCCGGGCGTCGCGCTGTGGGGAGTTAGACGCCGCGTATAGAAGGGCACAAGCCATACGCGGATACCTTACAGACCTTATCGAGTGCCTTGATGAGAAAATGCCGCAACTGGAGGCGTTAGAAGCTCGCGCGCTGGCGCTACATAAGCGGCGCTGTGAGTTCTTAGTTGAAAGGCGACGGGCCGACCTGCGGGATCAGGCGCAAGATGTACTCGCCCCACCCGGTCGAGCCTCGAAGCCAGCTGACAACGAAGAGAAGACGCGTCGCGCCGCCGAGCGCGAGGGGAGGCGGCGCGCGCGCAGGCTGCGGCGCGAGGCGGGCGCGGCCGCGCGCGCGCACCGGGACGGGGACTCCTCGGACGACGACCTGCCGCCGCATGAGCTGCACCACTACACACAGGAGAGAGATACAATCCGTCAACAATCAGCAACGTTGTTCAGTGACGCTTTGCCGGCGTGGCGAAGTGTGTCAGGCGTGTGCAGGCGCCTAGCGCGCTGGCGAGCTCGCGCTACGTCGCTGTATACGGATGCTTATGTCGCGGACTGTCTGCCCAAGCTACTGGCGCCCTATGTCCGGCATGAGCTAATTCTATGGAACCCGCTGGCAGATGAAGACAATGAAGACTACGAGAGAATGGATTGGTACAAATGCCTGATGATGTACGGCGTCCGTACTGAACGTGGGGCTGACGACTCCTCCGAATCTGCATCAGAAGGCGAAGTGGAGCCTCTCCCTGTGACGGACAGCACGGTGCGAGAGGACCCCGACCTGCTGCTGGTGCCGAGCGTCGTCGGCAGGGTGGTGCTGCCTTGTCTCACAGAGCTAGTATCAGTAGCGTGGGACCCAATGAGCGTGCGTTCGTGCATACGTCTGCGTTCGCTACTACTGCGGGCCGCGGGTCTGCCCACATGTTCCAACGCGTTGCGTCGCCTGTCGGCTGCCTTACGAGCAAGGTTGGCTGTGGCGCTTGGAGCTGATGTGTTCCTGCCTGCGTTGCCTCCACAAGTGCTGGAGGGCTCGGGCGGCGTGTTCTGGCGGCGCTGCGTGGGCGCGGGCGTGCGGCTGCTGCGCGCGACGCTGGCGCTGTGCGGCCCGCCCGCGCTGCTGTGTGCCGACCCGCTCGTACTGTCGCTTATTGAGACGTTATGCTGCGGCGCGGGCGCAGCAAGCGGGCCGTACGTAGCGAGCGCGGCGTCAGCGCTGACCGACACGCTGCCGCGCACTGGAGCGTTACGTAAGCGCGCGCTCGCACGACTGGCTGCGCTTGCTACTTTAGCACTGTCGAGGCTTGATAGTGACAACCCACTGCATTTAAAAGCCCTGGAGCAAGCACGGGCAGTGATCGCAGAAGCTCGAGCGGTTGAATGA
- Protein Sequence
- MSLFRKPKKIQRRVFCADDDEDGGEPEAPPPPVISQEKEKKEPKSSKKTALLSFADEEEEVEVFKVKKSSQSKRLAKKREKEKQKRDVRTDGDNNKYDPIIIEDDHTELNNDKPKPKKKVTLEGLILSGREALAADGAGDVSDESAPEEDDADEDDRGFHRYRADSVRAALLGAPGRIPDAALIHAARKTRQQARELGGATAGADYIPVKSESAPGSRLVRDDGSGDDEEEGRIHVRGLDLPSDKPKRGTAAVSEEELDSESEEWVEQQLQKARPVLVDLTGEAAIEVNPFSVALPPPQMSAPEHLRPLTTGSQPPATANELVEALRKRLGELQVERESTSETQKDLRERLLTSARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLVERRRADLRDQAQDVLAPPGRASKPADNEEKTRRAAEREGRRRARRLRREAGAAARAHRDGDSSDDDLPPHELHHYTQERDTIRQQSATLFSDALPAWRSVSGVCRRLARWRARATSLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTERGADDSSESASEGEVEPLPVTDSTVREDPDLLLVPSVVGRVVLPCLTELVSVAWDPMSVRSCIRLRSLLLRAAGLPTCSNALRRLSAALRARLAVALGADVFLPALPPQVLEGSGGVFWRRCVGAGVRLLRATLALCGPPALLCADPLVLSLIETLCCGAGAASGPYVASAASALTDTLPRTGALRKRALARLAALATLALSRLDSDNPLHLKALEQARAVIAEARAVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041794; iTF_00726380; iTF_01439956; iTF_00907903; iTF_00274448; iTF_00273620; iTF_00450134; iTF_00907065; iTF_01260122; iTF_01338779; iTF_01340132; iTF_00042654; iTF_00040837; iTF_00043520; iTF_00622847;
- 90% Identity
- iTF_00726380;
- 80% Identity
- -