Fyps027732.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- PAXBP1
- Assembly
- GCA_947568875.1
- Location
- OX387645.1:5311927-5348510[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-15 1.5e-10 42.0 0.0 3 190 523 690 521 699 0.73
Sequence Information
- Coding Sequence
- ATGTCGTTGTTTCGAAAGCCGAAGAAGATTCAACGTCGGGTGTTTTGTGCTGATGATGACGAGGATGGGGGGGAGCCTGAGGCTCCGCCGCCGCCAGTCATCAGTCAAGAAAAGGAAAAAAGGGAAAAAGAACCCAAGTCTTCCAAGAAAACTGCTCTGTTGAGTTTCGCTGACGAAGAAGAAGAAGTGGAAGTGTTCAAAGTCAAGAAGTCTTCTCAAAGTAAGAGATTAGCAAAGAAGCGTGAGAAAGAGAAGCAGAAGCGCGATGTGGGAACCGATGGTGATAATAACAAATATGACACTATCATTGTTGAGGACAATCAAACTGAGCTCAACAACGACAAACCCAAGCCAAAGAAGAAGGTGACGTTAGAGGGGCTGATTCTGTCCGGTCGGGAGGCGCTGGCGGCCGACGGGGCGGGTGACGTGTCCGACGAGAGTGCGCCCGAGGAGGGTGACGCTGATGAGGACGACAGGGGGTTCCATCGGTACCGCGCCGACTCCGTGAGGGCGGCGCTCTTGGGCGCGCCGGGCCGCATTCCCGACGCCGCGCTCATACACGCCGCACGCAAGACCAGACAGCAGGCTCGCGAGTTGGGTGGAGCCACCGCCGGCTCGGATTATATTCCCGTGAAGTCCGAGTCCGCACCGGGATCCCGGTTAGTGCAGGATGACGGATCCGGCGACGATGAAGAGGAAGGCCGGATTCATGTCAGGGGACTGGACTTGCCGAGTGATAAGCCTAAACGTGGCACAGCAGCAGTGTCGGAAGAAGAGCTGGACAGTGAAGCGGATGAGTGGGTGGAACAACAGTTGCAGAAGGCACGACCCGTCCTCCTGGATCTGACTGGTGAAGCGGCTATAGAAGTCAATCCGTTCTCGGTAGCTTTGCCGCCGCCTCAGATGTCTGCACCGGAACACTTGCGACCTCTCACGACGGGCTCGCAGCCTCCCGCGTCTGCCAACGAACTGGTGGAGGCGCTTAGGAAACGGTTAGGAGAACTCCAATTAGAACGCGAGGCAACATCCGAAACACAAAAGGACCTTCGCGAGAGGTTGCTCACTTCGGCAAGAATACGAGAAAGCCGGGCGTCGCGCTGTGGGGAGTTAGATGCCGCGTATAGAAGGGCGCAGGCCATACGCGGATATCTTACAGACCTTATCGAATGCCTTGATGAAAAGATGCCACAACTGGAGGCGCTAGAAGCTCGAGCGTTGGCGTTACATAAGCGTCGCTGTGAGTTTCTCGTAGAAAGGCGGCGAGCCGATCTGAGGGATCAAGCACAAGATGTACTTGCACCACTTGGTCGATCCTCAAAGCCAGCTGATAATGAAGAGAAGACGCGTCGTGCGGCCGAGCGTGAGGGCCGGCGCCGCGCGCGACGCCTCCGGCGCGAGGCCGCGGCCGCGGCGGCCGGCGCCGCGCTGCCGCACAGAGATGGGGACTCCTCGGATGATGAACTGCCTCCGCATGAGATGCATCATTATACTCAGGAGAGAGACGCAATCCGTCAACAGTCAGCATCGTTGTTCAGCGACGCGCTGCCGGCCTGGCGCAGCGTGTCGGGCGTGTGCAGGCGCCTGGCGCGCTGGCGAGCGCGTGCCACGTCGCTGTACACAGACGCTTATGTCGCGGACTGTCTTCCCAAGCTACTGGCGCCCTATGTCAGGCATGAGCTAATTCTATGGAACCCGCTAGCAGACGAAGACAATGAAGACTATGAGAGAATGGATTGGTACAAATGTCTGATGATGTACGGCGTCCGTACTGAATGTGGTGCTGACGACTCCTCAGAATCTGCATCAGAAGGCGAAGTAGAGCCTCTTCCTGTGACGGAGAATTCGGTGCGGGAGGACCCTGACTTGCTGCTGGTGCCCAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTGACAGAGCTAGTATCAGTAGCGTGGGACCCAGTGAGCGTGCGCTCCTGCATACGTCTGCGTTCACTTCTAGTTCGCGCAGCAGGTCTGCCTACATGTTCCACTGCGTTACGTCGCTTATCGGCTGCGTTACGAGCGAGACTAGCTGTTGCGTTAGGAGCTGATGTGTTCCTGCCTGCGTTGCCGCCACAGGTAATGGAAGGTGTAGGCGGTGCGTTCTGGCGCCGTTGCTTGGGCGCGGGCGTGCGGCTCCTGCGCGCTACGCTCGCGCTCACGGGCCCGCCTGCGCTGTTGTATGCTGACCCGCTCGTTCTGTCGCTTATAGAGACGCTATGCTGCGGCGCGGGCGCGGCAGGAGGGCCATACATAGCTAGCGCGGCGTCGGCCCTCACCGCCACGCTGCCCCGCAGCGGTGTGCTACGGAAGCGAGCGCTCGCGCGACTGGCGGCGCTCGCTACTTTAGCGCTATCGAGGCTTGATAGTGATAACCCGTTGCATTTAAAAGCCCTGGAACAAGCAAGAGCAGTGATCGCAGAAGCTCGAGCGGTTGAATGA
- Protein Sequence
- MSLFRKPKKIQRRVFCADDDEDGGEPEAPPPPVISQEKEKREKEPKSSKKTALLSFADEEEEVEVFKVKKSSQSKRLAKKREKEKQKRDVGTDGDNNKYDTIIVEDNQTELNNDKPKPKKKVTLEGLILSGREALAADGAGDVSDESAPEEGDADEDDRGFHRYRADSVRAALLGAPGRIPDAALIHAARKTRQQARELGGATAGSDYIPVKSESAPGSRLVQDDGSGDDEEEGRIHVRGLDLPSDKPKRGTAAVSEEELDSEADEWVEQQLQKARPVLLDLTGEAAIEVNPFSVALPPPQMSAPEHLRPLTTGSQPPASANELVEALRKRLGELQLEREATSETQKDLRERLLTSARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLVERRRADLRDQAQDVLAPLGRSSKPADNEEKTRRAAEREGRRRARRLRREAAAAAAGAALPHRDGDSSDDELPPHEMHHYTQERDAIRQQSASLFSDALPAWRSVSGVCRRLARWRARATSLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTECGADDSSESASEGEVEPLPVTENSVREDPDLLLVPSIISRVVLPCLTELVSVAWDPVSVRSCIRLRSLLVRAAGLPTCSTALRRLSAALRARLAVALGADVFLPALPPQVMEGVGGAFWRRCLGAGVRLLRATLALTGPPALLYADPLVLSLIETLCCGAGAAGGPYIASAASALTATLPRSGVLRKRALARLAALATLALSRLDSDNPLHLKALEQARAVIAEARAVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01094058;
- 90% Identity
- iTF_01439956; iTF_00622847; iTF_01094058; iTF_00685460; iTF_00907065; iTF_01338779; iTF_01340132; iTF_00907903;
- 80% Identity
- -