Basic Information

Insect: Caradrina kadenii
Gene Symbol: PAXBP1
Assembly: GCA_947462355.1
Location: OX381674.1:13586225-13603372[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.8e-13 3.5e-09 36.7 0.0 5 190 522 687 519 696 0.69

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.8e-13	3.5e-09	36.7	0.0	5	190	522	687	519	696	0.69

Sequence Information

Coding Sequence: ATGTCGTTGTTTCGAAAGCCGAAGAAGATCCAGCGTCGTATGTTTTGTGCCGATGATGACGAGGATGGTGAGCCCGAGGCCCCGCCGCCGCCAATAATCAGCAGTCAAGAAAGAGAGAAGAAGGAGACCAAATCTTCTAAGAAAACTCCTCTGTTGAGTTTCGCTGACGAAGAAGAAGAAACAGAAGTGTTTAAAGTCAAGAAGTCTTCTCAAAGTAAGAGATTGGCCAAGAAGCGTGAAAAAGAGAAGCAGAAGCGTGATGTGAGAACCGATGATGATAATAACAAATATGACACTATTATAATTGAGGAAAAGAACAACCACACTGAGATGACCAACGACAAACCCAAACCAAAGAAGAAGGTGACGTTAGAGGGGCTGATTCTGTCCGGTCGAGAGGCGCTGGCCGCTGACGGGGCGGGCGACGTGTCCGACGAGAGTGCCCCCGAGGAGGGCGACGCCGACGAGGACGACAGGGGGTTCCATCGGTACCGCGCCGAGTCCGTGAGAGCCGCACTGTTGGGCGCGCCGGGGCGGATTCCCGACGCTGCGCTCATACACGCCGCTCGCAAGACCAGACAGCAGGCTCGCGAGTTGGGCGGAGATTACATTCCCGTGAAATCAGAGTCCGCACCGGGTTCCCGGTTAGTGCGGGATGACGGCTCCGGCGACGATGAGGAGGAAGGCAGGATCCATGTCATCGGCTTGGACTTGCCCAGTGATAAGCCTAAACGTGGCACAGCTGCAGTTTCTGAAGAGGAGCTGGATAGCGAGGCAGACGAGTGGGTGGAACAACAGCTGCAGAAGGCACGGCCCGTCCTCGCGGATCTGACTGGTGAAGCGGCGGTAGATGTGAACCCGTTCTCCGTGGTCCTGCCTCAGCCGCAGGTGGCTGCCCCGGAGCACTTGCGGCCTCTGACTACTGGCACGCAGCCTCCCACGACAGCTAACGAACTCGCGGATGCACTTAGGAAACGGTTACAAGAACTCCAAGTGGAACGCGATGCAACATCGGAAACACAGAAGGACCTTCGCGAGCGGTTGCTTTCCTCGGCCAGAATACGAGAGAGCCGGGCGTCGCGCTGCTCGGAACTAGACGCCGCGTACAGGAGGGCGCAGGCCATACGCGGGTACCTCACCGACCTAATAGAGTGCCTTGATGAGAAAATGCCACAACTGGAGGCGTTAGAATCCCGCGCGTTGGCGTTACATAAGCGACGCTGTGATTTCCTCATAGAAAGGCGAAGAGCCGACCTGCGGGACCAGGCGCAAGATGTACTCGCACCGCCTGGTCGGGCGGCCACAAAGTCAGCTGATAGCGAGGAGAAGACGCGTCGCGCGGCCGAGCGCGAGGGTCGCCGGCGCGCGCGCCGCCTGCGCCGCGAGGCCGCGGCCGCCGCCGCCGGGGGGGCCGCGCACGCGCACCGCGACGGCGACTCCTCCGACGACGACCTGCCGCCGCGCGAGCTGCACCACTACACGCAGGAGAGAGACGCCATCCGCGTGCAGGCGGCGTCGCTGTTCGGCGACGCGCTCCCGGCGTGGCGCAGCGCGTGGGGCGTGTGCGCGCGCCTGGCCCGCTGGCGCGCGCGGGCTGCTCGCCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTCGCGCCCTACGTCCGGCACGAGCTAATACTATGGAACCCGTTGGCAGACGAAGACAACGAAGACTACGAGAAAATGGATTGGTACAAATGTCTGATGATGTACGGCGTCCGCACGGAACGCCCCGCTGACGACTCCTCAGAGTCGGCCTCGGACGGTGAGGTGGAGCCGTTGCCCGTGACGGAGACCACTGTGCGCGAGGACCCTGACCTGCTGCTGGTGCCCACCATTATCAGCAGGGTGGTGCTGCCCTGTCTGACAGAGCTAGTGTCGGCGGCGTGGGACCCCATGAGCGTGCGCTCGTGCATCCGGCTGCGCTCGCTGGTGCTGCGGCTGGCGGCCACGCCGGCGTGCGCGCCCGCGCTGCGGCGGCTGGCGGGCGCCGCGCGCGCTCGCCTGGCCGGCGCGCTCGCCGCCGACGTGTTCCTGCCCACGCTGCCGCCGCAGGTGCTGGAGGGCGCGGGCGCGGCGCTGTGGCGGCGCTGCCTGGGCGCGGGCGTGCGGCTGCTGCGGGCGGCGCTGGCGCTGTGCGCGCCGCCCGCGCTGCTGCAAGCCGACCCGCTCGTGCTCGCGCTCATTGACACCCTGTGCTGCGGCGCGGGCGCGGCGAGCGGGCCGCACGTGTCGCGCGCGGCGTGCGCGCTGTCGGCCAGCCTGCCGCGCGCCGGGCGCCTGCGCGCGCGCGCCCTCGCGCGCCTCGCCGCGCTAGCCACGCTCGCGCTGTCCCGCCTCGACGGCGACAACCCGCTGCATCTGAAAGCACTGGAGCAAGCGAGAGCGGTAATCGCAGAGGCGCGCGCGGCTGAATGA
Protein Sequence: MSLFRKPKKIQRRMFCADDDEDGEPEAPPPPIISSQEREKKETKSSKKTPLLSFADEEEETEVFKVKKSSQSKRLAKKREKEKQKRDVRTDDDNNKYDTIIIEEKNNHTEMTNDKPKPKKKVTLEGLILSGREALAADGAGDVSDESAPEEGDADEDDRGFHRYRAESVRAALLGAPGRIPDAALIHAARKTRQQARELGGDYIPVKSESAPGSRLVRDDGSGDDEEEGRIHVIGLDLPSDKPKRGTAAVSEEELDSEADEWVEQQLQKARPVLADLTGEAAVDVNPFSVVLPQPQVAAPEHLRPLTTGTQPPTTANELADALRKRLQELQVERDATSETQKDLRERLLSSARIRESRASRCSELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALESRALALHKRRCDFLIERRRADLRDQAQDVLAPPGRAATKSADSEEKTRRAAEREGRRRARRLRREAAAAAAGGAAHAHRDGDSSDDDLPPRELHHYTQERDAIRVQAASLFGDALPAWRSAWGVCARLARWRARAARLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYEKMDWYKCLMMYGVRTERPADDSSESASDGEVEPLPVTETTVREDPDLLLVPTIISRVVLPCLTELVSAAWDPMSVRSCIRLRSLVLRLAATPACAPALRRLAGAARARLAGALAADVFLPTLPPQVLEGAGAALWRRCLGAGVRLLRAALALCAPPALLQADPLVLALIDTLCCGAGAASGPHVSRAACALSASLPRAGRLRARALARLAALATLALSRLDGDNPLHLKALEQARAVIAEARAAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01094058;
90% Identity: iTF_00273620;
80% Identity: -