Oiva009259.2
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000006.1:8469726-8479597[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.021 2.1 10.4 0.6 3 23 209 230 208 230 0.90 2 23 0.071 7.1 8.7 0.3 1 21 612 632 612 633 0.96 3 23 7.9 7.9e+02 2.3 0.3 1 22 677 698 677 700 0.82 4 23 0.65 65 5.7 0.5 3 21 711 729 710 730 0.91 5 23 0.4 40 6.4 0.1 3 20 739 756 737 760 0.89 6 23 0.0014 0.14 14.1 0.2 3 23 780 801 778 801 0.96 7 23 0.043 4.3 9.4 3.0 1 23 807 830 807 830 0.95 8 23 0.15 15 7.7 0.0 1 23 856 879 856 879 0.90 9 23 0.022 2.2 10.3 3.4 1 23 884 906 884 906 0.97 10 23 0.042 4.2 9.4 0.1 1 23 912 935 912 935 0.97 11 23 0.0027 0.27 13.2 1.3 1 23 947 969 947 969 0.97 12 23 0.0017 0.17 13.8 4.0 1 23 1012 1035 1012 1035 0.96 13 23 0.0041 0.42 12.6 0.4 1 23 1095 1118 1095 1118 0.95 14 23 0.0013 0.13 14.2 2.1 2 23 1142 1164 1141 1164 0.95 15 23 0.4 40 6.4 0.1 2 23 1170 1192 1169 1192 0.92 16 23 0.012 1.2 11.2 0.2 1 21 1236 1256 1236 1257 0.95 17 23 0.0014 0.14 14.1 0.6 1 23 1267 1289 1267 1289 0.93 18 23 0.0001 0.01 17.7 0.3 2 23 1379 1401 1379 1401 0.93 19 23 2.1e-07 2.1e-05 26.1 1.1 3 23 1408 1428 1407 1428 0.98 20 23 0.39 39 6.4 0.2 1 23 1446 1468 1446 1469 0.91 21 23 0.15 15 7.7 0.0 1 23 1491 1513 1491 1513 0.97 22 23 0.032 3.2 9.8 0.6 1 23 1519 1542 1519 1542 0.95 23 23 0.00035 0.035 16.0 0.6 1 23 1550 1573 1550 1573 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTAAATTTTGACCGTGTTTGTAGACTGTGCTTGTCATCTCGATGTGAATTACTACCGATATTtcctaccaccagttcggatgACTCGGATCCTCCTGTCCTCGCTTCGAAAATAAAAGATTGCGTGTCAGTGCAGATAAGCGAAAATGATGACTTGCCAACCAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCACATATTTAAGGCTGTGTGTGACAGGAGCCAAAACAAATTACAGTCTCTCACAAACAAGCAGAGCAGCCAACTAGAAGAGTTGAACATAAAAAGTGAGCCTCTATCTGATGGAGCTTATGATGAAGGAGTGGTCATTGATGGATCATACCCTGATAGTGAGAATGCGGGCCCATCAAGTAAATTGCAGCCAGAAGGACCACCTATTTTGGCTTCACTGGGACTTACGCCCAGAAGTGATAAGGGCATGGATAGTGAAAAGGACGAGGATTATGAAGAAGAAGACCGAGAAGAAATGCCAGAGCATCAGTCTCGTAGAAGTCCATCTCAAATGCCTGAAGTTTCCATCACCGTGATGCGCCCAACGGGCGAGACACTTCACGCTCGTCAAGGCATTCAACAAATTGCTTCTAAAGATTGTCTCGTTTGCGGCCGCTCTTACAGATACTCCCACAATGCACGCAGACACGAACTGGGTGCTCACGGTTTCGACAGATACACTAACAAAACCACAGCAAAGAAATCTCACAGTCATATGATACCGAAATTTAGACCTAATCCGTTCAACCCTAAAGCACGTTTAATGCCAAATCCAATCAGCCACAAAATGCAATACATACCAAAACCAGTCCCAACTAAAATGATACCCCAAAAAGTTATTGCACCACCAAAACCAATTCCGATTAGAACTCTCAAACCAACCCAGAACAATTTACCATATCCCCTTCGTATTAAAGCTTTAAAGGACctacaaattaagaaaaaggaACCACAAATATTGAAAACATTGCTCACATCAAAACCAGAAGTTTTAGTGTCTGAGCCTGAAATAATAAACTCGGGCCCAGAAAGTCCAGAGACATTGATCTCTGAACCAGAAATAGCATCTTTTCAAGTTGAGACAATTCTTTCAGAGCCAGGTGGCTTTATTAATCAACCTCATGAAGAAGATGAGATGGAAGATGAGAATAATCAAGAACAGAACTATGACACTGTTGACATGGAATCAGATAATGAGATTGAAATAGCTCGTCAGCAAGaacaaaaaaacaatattgatattGAAGAGAATCACATTGGAAATGATGCTGAAGAAAATgcacaagaagaagaagaaggagaagaagaaatgaataatgaagaaaataatgaaaaagaACATATGGAAGATAATGTAGACAGTCAAGACATGAgtgttgaaaataatattaatgcaGAGCTTGATGAAACCGCGAAAGAACACGAAGAAGAGAATggtgaaaaagaaaataacgaCCAAGACACAATCCAAGAAGACAATGAAGATGATGAAGAATTGCCTCCAATTGCTCCTGTGGTCGAGATTAATGAAGATTTACAAACTAATTCATACCACAGTGAAGGTAATGAGGATGAAGACCTTGACGAGACTGTCGATCCCAATGAACCTGTCGATGGTGATGAAACAGTAAAACAGCTAGATCCAAATAAAGTGTATGTTACTAAAACACAAAGGGATTTCATTTTGCAATATCGTGATATTATTGAACAAATCAACACAAAGCTTTGTCTCTGCTGCAACAAAGAACATCCACGTAGAAAAGCGGTAATACAACATTTACAGAAAAATGGGCACAAAGTTCCTAAGCACACATGCTATAATTGTGTGGTTACATTTACTCATATTGGAGCTTTACTGAGCCACATGAGAGCTAATACTTGTACTAACTTATGGAAAATAATTTACGATGAAAAAGGCATCCCTGATGATATAGTGGTGGAAGATGAAGAGGAACCCAAAGATACAAAAATTCAATATAAAGACATACTCAATGCAAGGTCTTATGCTTGCAAATTATGTCCAGCCAAATTCCAATTAAAGCAGTTTATAATGAAGCATGTTCTAGACGTTCATGAAGATGGCCAATCGCGAGTCCCTAATTCCTGTGTCCATTGCGGTATACGATTCAAAGAAAGAAGTATCGCCAAGAGGCACATACGAAATGGAGATTGTACTGTTTACATCGCTTGTGAGTTATGTTCTGAAAAATTCTCGAACATTCATGAATTTAATGAACACGCCGTTGCCATCCACGCAGGCAATTTCGACCCCGATAGTCAGAACAAGTGCGTCGACGGCAGACCGACAGACTGCCCAATATGCGGAAAGAAAAATAGTAGCTATACGAATTTGGTCAAGCACTTGAGAGTGATTCACAACGACGACAAGCCGCATCACTGTCAGCATTGCGACGCCAAATTCGAACAAGCGGCCGAAATTAACAAACACATTTACATGGAGCACTCCAACCGAATGCTGGGCATGACGTCCACCGAGCCCGACATGTCGCTCGTCAAGGAGGAAGCCGAGGAGTACCACTACTCGTGTACGGAGTGCAACGCCATTTTCGAGACCGTCGACGCCTGGACTGACCACCAGGTCGCGGAACACAACCAGATCGCACACCACTGTGACCAGTGCGAAAAGAAATTCTTGCGTCCCTCAGAACTCGCTGAACACAAAAATACACATCTCCGAGTTAAATTCTATCCGTGCAATATTTGTTCCAACTCGTACGGCTCACCGCAAAAACTGTCCGAGCACGTACAAAAGGTCCACCCCAATGCTCCAGTGCGCAATGCGGAAAACGAATTTTTCTGCGATATATGCATACGATCTTTTAAAAGTCGTCAGGCATATTCCAATCATATGCGTATACATGCCAAGGTGCCCACGACTAACAGGAAACCTGGCGTAGGAAAGGGCTTTCCACCTCAGATTATTGGAAAACCCATTCGTCAATTTTCTATGCAACCAGGATTCAGCCCTTATGTTCCGAACGCCCCTTACTGCTGTGACATTTGCGGAAAAGGGTTCATGCATAAGAAAAACATATGGAAGCATAAGAAGGTTCTGCATGCAGATATTATCAATGACAGGCATGACAGCGAGGAGAATACTATGCATGCATCAACAGAAGAAGATGACTACAATGTGGACGAAAATGGCGCAATCCTTTCTACTCCTCAATTCAATAGTTTCAACTTTACAAATCTCCCGAATAATTCGCAACAGTCATCACAAGACGCCCTTCCATATGCCTGTGATATATGTTACAAGCGCTTTCCAATTAAAGTGAGTTTGACTGTGCACAAGAGAGCTAAACATGATATTCCTTATGGAGGCGTCGGTGGCTCTGAGAATCAATCTGCGCCGACATCGTCCGAAGGGAGATCGAGTTGCACTATATGCAAAATAACATTTTCAGATAAGAAATCCTATTATCGTCACAGGAAAAACGTTCATAAATCCTCCATACAGATGTGCAAAATTTGTGGAAAACCGCTTGGCTCAACCTTAGAACTTTATGAGCATTTAAAAGCGGCGCATGCACGCGAGTTGTTGGGCTATGATGCCAGTCAAGGAACAAGTAAGTCTCAAGATATGGCACAAGAGGCGGATGCAGATTACGAGGCAGATCAAGACTTGGTCGACCCTGGCGCCGAGTTCCAAGCACGGTATCCTTGTGATACTTGTGGCAAACAGTTCGTCGGGCTATTGGCTTTGCAAAATCACCAGTGTATAAATCAGATACAATCGCAGCCGCAAACTTTCGACTGCGAAATATGTCACAAGAGCTACACTTCGATCGCCGCTTTGAAGAGCCACCGCGGCTGGCATCTGAGGTCACCCGACGGCAAGGCGGCCGCTAACAATACCGGACTTTGGATGCCTCAGAATAAAGTTACGACAAAAATTAGTAAACACGAGGTCACCGAACCTATACAGACTCGTTCTTCTCAACCTACGCCGACTACCAGTGTGCCAAAAAGAAGGTTACCCCCGGAAGTGGAGGTGACGGTGGTAAACCCTAATAAGAAGTTGCGATCCGATGATTCTGTCGAAATGGAACACCAGAATAACTTGTCCGGTGGGGTCGAAGATAGGTACTGTAACATTTGCGACAAAGAGTTCACTAAGCGAGCTGCGTATCAACGTCACATGGATGAGGTGCATCAACCGAATTCCGTGTTCTGTCCAGTTTGCGACAAGAGTTTCACACGCAAATCTACTCTTATCGTGCATATGAAAAAGCATTACGAAGGCGGGGAGGGGTCGTCTGGTTTGGGGCAAATGGATGACGACGGTCACGCGTGTGACGTTTGCGGCGCCCAGTTCGAGAGCGCCAAGGCTGTGAGCGCGCACAAGGCCGCGCACCACGCCGAGGACTCTGCCGGCGAGTCGGACGACGACTGCAGCACCACGCCGCAGCAGCCCGGCGAGTTCACGTGCGGCCAGTGCGGCGACGGCGTCGCCACTCCGCGCGACCTGATAGCCCACCGAGCGATGCACGCCACGCCCACCAAATTCTTTTGTAACATTTGCAAAGTCTACTTCGCGCGGGCCCTCGACCTGTCCTCCCACACCCGCGCTAGGCACTCTGACAACGAGAAAGTTTTCTTCCCTTGCGCCATGTGCGACCGATTTTACATGAACAAAAAGAGTTTGCAACGGCACATCGAGATGATGCACTGA
- Protein Sequence
- MSVNFDRVCRLCLSSRCELLPIFPTTSSDDSDPPVLASKIKDCVSVQISENDDLPTNVCRKCMDNVNNWHIFKAVCDRSQNKLQSLTNKQSSQLEELNIKSEPLSDGAYDEGVVIDGSYPDSENAGPSSKLQPEGPPILASLGLTPRSDKGMDSEKDEDYEEEDREEMPEHQSRRSPSQMPEVSITVMRPTGETLHARQGIQQIASKDCLVCGRSYRYSHNARRHELGAHGFDRYTNKTTAKKSHSHMIPKFRPNPFNPKARLMPNPISHKMQYIPKPVPTKMIPQKVIAPPKPIPIRTLKPTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPGGFINQPHEEDEMEDENNQEQNYDTVDMESDNEIEIARQQEQKNNIDIEENHIGNDAEENAQEEEEGEEEMNNEENNEKEHMEDNVDSQDMSVENNINAELDETAKEHEEENGEKENNDQDTIQEDNEDDEELPPIAPVVEINEDLQTNSYHSEGNEDEDLDETVDPNEPVDGDETVKQLDPNKVYVTKTQRDFILQYRDIIEQINTKLCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRANTCTNLWKIIYDEKGIPDDIVVEDEEEPKDTKIQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPNSCVHCGIRFKERSIAKRHIRNGDCTVYIACELCSEKFSNIHEFNEHAVAIHAGNFDPDSQNKCVDGRPTDCPICGKKNSSYTNLVKHLRVIHNDDKPHHCQHCDAKFEQAAEINKHIYMEHSNRMLGMTSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNICSNSYGSPQKLSEHVQKVHPNAPVRNAENEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGVGKGFPPQIIGKPIRQFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADIINDRHDSEENTMHASTEEDDYNVDENGAILSTPQFNSFNFTNLPNNSQQSSQDALPYACDICYKRFPIKVSLTVHKRAKHDIPYGGVGGSENQSAPTSSEGRSSCTICKITFSDKKSYYRHRKNVHKSSIQMCKICGKPLGSTLELYEHLKAAHARELLGYDASQGTSKSQDMAQEADADYEADQDLVDPGAEFQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKISKHEVTEPIQTRSSQPTPTTSVPKRRLPPEVEVTVVNPNKKLRSDDSVEMEHQNNLSGGVEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGLGQMDDDGHACDVCGAQFESAKAVSAHKAAHHAEDSAGESDDDCSTTPQQPGEFTCGQCGDGVATPRDLIAHRAMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00353347; iTF_00354361; iTF_00695886; iTF_00986469; iTF_00843720; iTF_00985356;
- 90% Identity
- -
- 80% Identity
- -