Cgly003492.2
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- -
- Assembly
- GCA_963855885.1
- Location
- OY979628.1:13638586-13646672[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.022 1.4 10.2 0.6 3 23 445 466 444 466 0.90 2 22 0.057 3.5 8.9 0.6 1 22 843 864 843 864 0.95 3 22 8.3 5.1e+02 2.1 0.3 1 22 907 928 907 930 0.82 4 22 1.8 1.1e+02 4.2 0.8 1 14 939 952 939 960 0.81 5 22 0.0082 0.5 11.6 0.1 3 23 1010 1031 1008 1031 0.95 6 22 0.0027 0.16 13.1 3.4 1 23 1037 1060 1037 1060 0.95 7 22 0.16 9.5 7.5 0.0 1 23 1086 1109 1086 1109 0.90 8 22 0.023 1.4 10.1 3.4 1 23 1114 1136 1114 1136 0.97 9 22 0.0075 0.46 11.7 1.3 1 23 1142 1165 1142 1165 0.94 10 22 0.0015 0.091 13.9 1.4 1 23 1177 1199 1177 1199 0.98 11 22 0.0018 0.11 13.6 4.0 1 23 1242 1265 1242 1265 0.96 12 22 0.0048 0.29 12.3 1.8 1 23 1325 1348 1325 1348 0.96 13 22 0.0014 0.084 14.0 2.1 2 23 1372 1394 1371 1394 0.95 14 22 0.049 3 9.1 0.1 2 23 1400 1422 1399 1422 0.94 15 22 0.012 0.75 11.0 0.2 1 21 1466 1486 1466 1487 0.95 16 22 0.0015 0.094 13.8 0.6 1 23 1497 1519 1497 1519 0.93 17 22 0.00011 0.0067 17.5 0.3 2 23 1609 1631 1609 1631 0.93 18 22 2.2e-07 1.4e-05 25.9 1.1 3 23 1638 1658 1637 1658 0.98 19 22 0.0063 0.38 11.9 0.2 1 23 1676 1699 1676 1699 0.93 20 22 0.15 9.2 7.6 0.0 1 23 1721 1743 1721 1743 0.97 21 22 0.034 2.1 9.6 0.6 1 23 1749 1772 1749 1772 0.95 22 22 0.00037 0.023 15.8 0.6 1 23 1780 1803 1780 1803 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAATTACGATCGTGTTTGTAGACTGTGCTTGTCATCTCGATGTGAATTACTCCCGATATTTCCTACCACCAGTTCGGATGACTCGGATCCTCCTGTCCTCGCCTCGAAAATCAAAGATTGCGTGTCAGTGCAGATAAGCGAGAATGACGACCTGCCGACGAACGTCTGCAGGAAATGCATGAACAATGTCAACAACTGGCACATATTTAAGGCTGTGTGTGAAAGGACCCAAAACAAATTACAGTCTCTGAATAACAAGGACAGCAGCCAACTAGAAGAGTTGAAAATCAAAAGTGAGCCTCTGTCTGATGAAGCCTATGATGATGGAGTGGTCATTGATGGATCATACCCTGACATTGAGAATGCTGGCCCATCAAGCAAACTGCAGCCAGAGGGTCCCCCCATTTTGGCTTCACTGGGGCTTACACCGAGAAGTGATAAGAAATATATAGATCCAAGAATGGACTGGCAACGAGTCCACGCTATTTTGGACATGGTCCAAGAAGATGAAGTTATTGACTCCTTGCAAACAATGGAAGAGAGCAATGTCATACATCAATCAGACCACGACTCGGACTCTGAGACTGAACTTAGTTACGAGGGAGTGGACGATGACTATGTAGATTACAAAAATGGATACTTATGTAAGAACAGGAAGGTTCTATCAAAAACACCTAAACTAACACCAGAGGACACTGTTGCAAGGATCAAAGAAGTTAACAACCTAAGGAAGCGAAGTTTTGTATCCAACAAGTTCTGTGCGCAGCCAAGAAGTGCTTGGGAAATGCTCTTCACTGATGACCTGCTAGAATTGATAGTGGCTTCCACCAATGAGAGAATCGCTGAAAACAGTAGAAAATCAAAACCCACATCACTAACGGAGCTAAGAACACTGATCGGAATTTTGTATTTCCATGGTATAATGCGGCCAACTCATCAGAAGATTAGTGACTTGTGGCACGAGGACTATGGAGTTATGTGTGTACGCAACGCGATGACGTATGAAAGATTTAAATGCATTTTGGAGAACATGAGGTTTGAGAGCGAGGAAGACAATAGCATTGTTCAGTTTGATGTGATGAGACGAGTACGGAAAGTGTTTGAAATCTTTGCACTCAATTGCAGAACTTCTAAAGAAGTTGACGATgGCATGGATAGTGAAAAAGACGAGGATTTTGAAGAGGAAGAAGATCGAGACGAAGTGCCGGAGAAGCAATCTTATAGAAGTGTTCCGAATATGCCTGAGGTTTCCATCACAGTCATGCGCCCCACTGGTGAGACGCTCCACGCGCGTCAAGGTATTCAGCAGATCGCCTCCAAGGACTGTCTCGTTTGCGGCCGCTCCTACAGATATTCCCACAACGCACGCAGACACGAACTGGGCGCTCACGGGTTCGATAGGTATACTAACAAAAccacaaataaaaaatcatccCACAGTCACATGCAACCGAAGTTTAGACCCAATCCTTTCAACCCAAAAGCGCGCTTGATGCCAAACCCTATCAGCCACAAAATGCAATTAATGTCAAAATCGGCTCCAACTAAAATGATGCCACAGAAAGTTGTGGCGCCCCCCAAACCCATCCCTATTAGAACCGCAAAGGCCGCCCAAAACAATTTACCATACCCACTTCGTATTAAAGCTTTAAAAGATttgcaaataaagaaaaaggagCCACAAATATTGAAAACGTTGCTTACGTCGAAACCCGAAGTTTTAGTATCTGAACCTGAAATAGTAAACTCTGGACCGGAAAGTCCAGAAACCTTGATTTCGGAACCGGAAATAGCATCTTTTCAAGTGGAAACAATTTTGTCGGAGCCCGGTGGATTTATTAATCAATCCCATGACGACGAAGAGATGGACGATGACAACAATCAAGAACAAAATTATGACACTGTTGACATGGAATCTGATAATGAAATCGAAATAGCGCGACAGCAAGAAGACAAAATCGATATTGAGGAGAACCATATTGAAAACGACGCTGAAGAACTCCCACAAGATGATGACGTCAATGGAGAAGATGAGCATGAAAAAGAACGTAAGTACGAAGATAATGGAGACAGTCAAGACATGGCTGTTGAGAATAATATTGATGCAGACCAAGAGCACGACGAGAATGCTAAAGAACAAGATGAAGATAATGATGAAAAGGGAAATAACGACCAAGATGCTAATCCTGAGGACAATGAAGATGACGAAGATTTGCCCCCTATGGGCATCGCTCCCGTGGTCGAGATTAATGAAGACTTACAGAATAATTCTTACAACAGCGAAGGAAATGAGGAAGAAGATCTCGACGAGACTGCCGATCCCAATGACACGGTCGATGTAAAAGCTTTAGATCCAGACAAAATTTACGTAACCAAAACTCAGAAGGAGTTCATTCTTAAATACCGCGATATCATCGAACAAATCAATACCAAGCTCTGTCTTTGTTGTAACAAGGAACATCCGCGCAGAAAAGCTGTAATACAACACTTGCAGAAAAATGGACACAAGGTTCCCAAACACACTTGCTATAATTGTGTGGTTACGTTCACTCATATCGGAGCTCTGCTCAGCCACATGAGATCTAACACGTGTACTGATCtttggaaaataatttataatgagaACGGAATCAGCGATGACCAGGTTGTGGAAGATGAACCAGTGCTGGATACTAAAGCACAATATAAAGACATTCTCAATGCAAGGTCTTACGCTTGCAAATTATGCCCAGCCAAATTCCAGTTGAAACAATTTATAATGAAGCATGTTTTAGACGTTCACGAAGACGGTCAGTCCCGAGTCCCTCACTCCTGCGTGCATTGCGGCTTACGCTTCAAGGAAAAGAGTATAGGCAAGAAGCACATCCGCAACGGAGATTGTACTGTATATATCGCTTGTGAAATGTGTCCGGAAAAATTCTTGAACACGCAAGATTTCAACGAACACGCGGTTGCCGTGCACGCCGGCAATTTCGACCCCGATAGTCAGAACAAGTGCGTCGACGGCAGACCAACAGATTGCCCTATTTGTGGAAAGAAGAACAGCAGCTATCCGAATTTGGTCAAACATCTGAGAGCGATACACAACGAGGAGAAACCTCACCACTGTCAACACTGCGATGCCAAATTCGAACAAGCGGGCGAACTCAACAAGCACATCTACATGGAGCACTCCGATCGAATGCTCGGCATGACGCCCACCGAGCCGGACATGTCTCTCGTGAAGGAGGAGGCCGAAGAGTACCACTACTCGTGTACGGAGTGCAACGCCATCTTCGAAACCGTCGACGCCTGGACTGACCACCAGGTCGCCGAGCACAACCAGGTCGCTCACCACTGCGACCAGTGCGAAAAGAAATTCTTACGCCCGTCTGAACTCGCCGAACACAAGAACACTCATCTTCGAGTTAAATTCTATCCGTGTCACGTTTGCAATAACTCGTACAGCTCCCCGCAAAAACTAACCGAACACTTCCAGCAAGCTCACCCCGGCGCTCCCATGCGCAATTTAGATACCGAATTTTATTGCGAAATATGCATACGAACGTTCAAAAGTCGTCAGGCGTATTCCAATCATATGCGCATTCACGCTAAAGTGCCCACGACCAATAGAAAGCCCGGGGCACCGAAGGGTTTCCCACCGCAGATAATAGGAAAGCCCATTCGCCAGTTCGCTTTGCAACCAGGATTCAGTCCTTTCGTCCCGAACGCTCCTTACTGCTGTGACATTTGCGGGAAAGGATTCATGCATAAGAAAAATATATGGAAGCACAAGAAGGTGTTGCACGCTGATATTGTTAACGACAGGGTCGACAGCGAGGAAAATACTATGCACGCGTCCACAGAGGAAGACGACTATAATGTGGATGAAAACGGCGCGGTCCTGTCGACTCCGCAGTTCAATAGTTTCAACTTCACAAACATACCTAACAACACGCCACAGACATCGCAGGACGCCCTTCCGTTCTCCTGTGAGCTATGTTACAAGCGCTTCCCACTCAAAACGAGCTTATGGAAGCACAAGAGAGCCAAACATGGGATCACTTACGGCAGCGAAGGTGGGTCCGACGGGCAACCGGCGCAGACGCCGTCGGAAGGCAGATCTAGTTGCACGATATGCAAAATCACATTTTCGGATAAGAAATCTTATTACCGCCACAGGAAAAATGTTCACAAGTCCTCCATACAGATGTGTAAGATTTGTGGAAAACCACTCAGTTCTACATTAGAACTGTACGAGCATCTGAAAGCTGCCCACGCCCGTGAACTGTTGGGCTACGACGCCACTCAAGGAACGAGTAAGTCGCAAGACGTAGCACCAGAAGCGGAGGCGGAATACGAACCCGATCAAGATCTGGTGGACCCTAGTGCCGAGTTCCAAGCGCGTTACCCTTGCGACACGTGCGGTAAGCAGTTCGTCGGCCTGTTGGCTCTGCAAAACCACCAGTGTATAAACCAGATACAATCGCAGCCGCAGACGTTCGACTGTGAGATTTGTCACAAGAGCTACACTTCGATCGCCGCTCTCAAGAGCCACCGCGGTTGGCATCTGAGGTCTCCCGACGGCAAGGCGGCCGCCAATAACACCGGGCTTTGGATGCCTCAGAACAAAGTAACGACAAAGATAAGTAAACACGAGGTCATCGAGGCACCGGTGACACGCGCGTCGCAACCGACGGCGACGACCAGCGCGCCGAAGAGAAGACTACCGCCCGAGGTGGAGGTGACCGTCGTCAACCCGAACAAGAAGCTGCGATCCGACGACTCGCTCGAGATGGAGCACCAGAACAACTTGTCCGGTGGGGCCGAAGACAGGTATTGCAACATTTGCGACAAAGAGTTCACCAAGCGAGCCGCTTATCAGCGGCACATGGACGAGGTGCATCAACCGAACTCGGTGTTTTGTCCGGTCTGCGATAAGAGCTTCACCCGAAAGTCTACACTTATCGTTCACATGAAGAAGCACTACGAAGGCGGAGAAGGATCTTCGAGTGCGGGGCAGATGGATGATGATGGCCACGCGTGCGACGTCTGCGGCGCTCAGTTCGAAAGTTCGAAAgcgttgaatcagcacaaggcGATGGCGCACGCTGAGGATTCCGGGGAATCGGACGACGATGACGACGGCGCGTCCGTGCAGCAGCCGGGCGAGTTCACGTGCGGACAGTGCGGCGACGGCGTCGCTACGCCGCGCGACCTCATCGCGCACCGCACGATGCACGCGACGCCCACCAAGTTCTTCTGTAACATCTGCAAGGTGTACTTCGCGCGCGCGCTCGACCTGTCCTCGCACACTCGAGCCAGGCATTCCGACAACGAGAAAGTGTTCTTCCCCTGCGCGATGTGTGACCGATTCTACATGAACAAAAAGAGTTTGCAACGGCACATTGAGATGATGCACTGA
- Protein Sequence
- MTVNYDRVCRLCLSSRCELLPIFPTTSSDDSDPPVLASKIKDCVSVQISENDDLPTNVCRKCMNNVNNWHIFKAVCERTQNKLQSLNNKDSSQLEELKIKSEPLSDEAYDDGVVIDGSYPDIENAGPSSKLQPEGPPILASLGLTPRSDKKYIDPRMDWQRVHAILDMVQEDEVIDSLQTMEESNVIHQSDHDSDSETELSYEGVDDDYVDYKNGYLCKNRKVLSKTPKLTPEDTVARIKEVNNLRKRSFVSNKFCAQPRSAWEMLFTDDLLELIVASTNERIAENSRKSKPTSLTELRTLIGILYFHGIMRPTHQKISDLWHEDYGVMCVRNAMTYERFKCILENMRFESEEDNSIVQFDVMRRVRKVFEIFALNCRTSKEVDDGMDSEKDEDFEEEEDRDEVPEKQSYRSVPNMPEVSITVMRPTGETLHARQGIQQIASKDCLVCGRSYRYSHNARRHELGAHGFDRYTNKTTNKKSSHSHMQPKFRPNPFNPKARLMPNPISHKMQLMSKSAPTKMMPQKVVAPPKPIPIRTAKAAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIVNSGPESPETLISEPEIASFQVETILSEPGGFINQSHDDEEMDDDNNQEQNYDTVDMESDNEIEIARQQEDKIDIEENHIENDAEELPQDDDVNGEDEHEKERKYEDNGDSQDMAVENNIDADQEHDENAKEQDEDNDEKGNNDQDANPEDNEDDEDLPPMGIAPVVEINEDLQNNSYNSEGNEEEDLDETADPNDTVDVKALDPDKIYVTKTQKEFILKYRDIIEQINTKLCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGISDDQVVEDEPVLDTKAQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPHSCVHCGLRFKEKSIGKKHIRNGDCTVYIACEMCPEKFLNTQDFNEHAVAVHAGNFDPDSQNKCVDGRPTDCPICGKKNSSYPNLVKHLRAIHNEEKPHHCQHCDAKFEQAGELNKHIYMEHSDRMLGMTPTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCHVCNNSYSSPQKLTEHFQQAHPGAPMRNLDTEFYCEICIRTFKSRQAYSNHMRIHAKVPTTNRKPGAPKGFPPQIIGKPIRQFALQPGFSPFVPNAPYCCDICGKGFMHKKNIWKHKKVLHADIVNDRVDSEENTMHASTEEDDYNVDENGAVLSTPQFNSFNFTNIPNNTPQTSQDALPFSCELCYKRFPLKTSLWKHKRAKHGITYGSEGGSDGQPAQTPSEGRSSCTICKITFSDKKSYYRHRKNVHKSSIQMCKICGKPLSSTLELYEHLKAAHARELLGYDATQGTSKSQDVAPEAEAEYEPDQDLVDPSAEFQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKISKHEVIEAPVTRASQPTATTSAPKRRLPPEVEVTVVNPNKKLRSDDSLEMEHQNNLSGGAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSSAGQMDDDGHACDVCGAQFESSKALNQHKAMAHAEDSGESDDDDDGASVQQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01092294;
- 90% Identity
- -
- 80% Identity
- -