Basic Information

Insect: Mellicta athalia
Gene Symbol: -
Assembly: GCA_905220545.1
Location: HG992182.1:6807332-6816421[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0043 0.53 12.2 1.0 3 23 207 228 206 228 0.96

2 22 0.041 5 9.1 0.6 1 22 609 630 609 630 0.95

3 22 2.6 3.2e+02 3.4 0.3 1 22 672 693 672 695 0.83

4 22 0.24 30 6.7 1.0 1 20 704 723 704 725 0.80

5 22 0.0053 0.65 11.9 0.1 3 23 775 796 773 796 0.96

6 22 0.0076 0.94 11.4 3.8 1 23 802 825 802 825 0.94

7 22 0.11 14 7.7 0.0 1 23 851 874 851 874 0.90

8 22 0.017 2 10.3 3.4 1 23 879 901 879 901 0.97

9 22 0.0049 0.6 12.0 0.2 1 23 907 930 907 930 0.96

10 22 0.00092 0.11 14.3 1.3 1 23 943 965 943 965 0.98

11 22 0.00016 0.019 16.7 1.8 1 23 1008 1031 1008 1031 0.97

12 22 0.0011 0.14 14.0 1.3 1 23 1091 1114 1091 1114 0.96

13 22 0.00027 0.033 16.0 2.3 2 23 1134 1156 1133 1156 0.96

14 22 0.077 9.5 8.2 0.1 2 23 1162 1184 1161 1184 0.93

15 22 0.0088 1.1 11.2 0.2 1 21 1228 1248 1228 1249 0.95

16 22 0.0043 0.53 12.2 0.7 1 23 1259 1281 1259 1281 0.93

17 22 7.8e-05 0.0096 17.7 0.3 2 23 1369 1391 1369 1391 0.93

18 22 1.6e-07 1.9e-05 26.1 1.1 3 23 1398 1418 1397 1418 0.98

19 22 0.0031 0.38 12.6 1.6 1 23 1434 1456 1434 1457 0.93

20 22 0.083 10 8.1 0.0 1 23 1478 1500 1478 1500 0.98

21 22 0.024 3 9.8 0.6 1 23 1506 1529 1506 1529 0.95

22 22 0.00022 0.028 16.2 0.4 1 23 1537 1560 1537 1560 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0043	0.53	12.2	1.0	3	23	207	228	206	228	0.96
2	22	0.041	5	9.1	0.6	1	22	609	630	609	630	0.95
3	22	2.6	3.2e+02	3.4	0.3	1	22	672	693	672	695	0.83
4	22	0.24	30	6.7	1.0	1	20	704	723	704	725	0.80
5	22	0.0053	0.65	11.9	0.1	3	23	775	796	773	796	0.96
6	22	0.0076	0.94	11.4	3.8	1	23	802	825	802	825	0.94
7	22	0.11	14	7.7	0.0	1	23	851	874	851	874	0.90
8	22	0.017	2	10.3	3.4	1	23	879	901	879	901	0.97
9	22	0.0049	0.6	12.0	0.2	1	23	907	930	907	930	0.96
10	22	0.00092	0.11	14.3	1.3	1	23	943	965	943	965	0.98
11	22	0.00016	0.019	16.7	1.8	1	23	1008	1031	1008	1031	0.97
12	22	0.0011	0.14	14.0	1.3	1	23	1091	1114	1091	1114	0.96
13	22	0.00027	0.033	16.0	2.3	2	23	1134	1156	1133	1156	0.96
14	22	0.077	9.5	8.2	0.1	2	23	1162	1184	1161	1184	0.93
15	22	0.0088	1.1	11.2	0.2	1	21	1228	1248	1228	1249	0.95
16	22	0.0043	0.53	12.2	0.7	1	23	1259	1281	1259	1281	0.93
17	22	7.8e-05	0.0096	17.7	0.3	2	23	1369	1391	1369	1391	0.93
18	22	1.6e-07	1.9e-05	26.1	1.1	3	23	1398	1418	1397	1418	0.98
19	22	0.0031	0.38	12.6	1.6	1	23	1434	1456	1434	1457	0.93
20	22	0.083	10	8.1	0.0	1	23	1478	1500	1478	1500	0.98
21	22	0.024	3	9.8	0.6	1	23	1506	1529	1506	1529	0.95
22	22	0.00022	0.028	16.2	0.4	1	23	1537	1560	1537	1560	0.96

Sequence Information

Coding Sequence: atGAGTGTAAATTATGATAGTGTTTGTAGACTGTGCTTGTCATCTCACTGCGAATTACTACCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTCGCATCTAAAATCAAAGATTGCGTGTCCGTGCAGataAGCGAAAATGACGAACTGCCAACCAATGTCTGCAGGAAATGCACTGACAATGTCAACAACTGGTTTATATTTAAGTCAGTATGTGAAAGGGCGCAAAATAAGCTACAGACATTATTTAATAAAGACAGCAGCCAACTGGAAGAGGTGAAAATAAAAAGTGAACCTCTATCAGATGAAGCCTATGATGATGGAGTGGTTATTGATGGATCATATCCAGATAGTGAGAATGCAGGCTCATCAACTAGACTGCAGCCTGAAGGGCCACCTATTTTGGCTTCACTTGGACTTACACCGAAAAGTGATAAGGGTATGGAGAGCGAGAAAGAGGAAGATTACGAAGGTGAGGATGAAATGACAGAGCAACAAACATTTACAAATATGCCTAACATGCCAGAAGTTTCTATTACCGTTATGCGCCCTACAGGCGAAACCCTTCATGCTCGCCAAGGCATTCAACAGCTTGCTTCTAAGGATTGCTTAGTGTGTGGTCGATCCTATAGATACTCACATAATGCTCGGCGTCATGAACTTACAGCACACAATTTTGAtagatatacaaataaaactgCAAATAAGAAGTCACACACACATATGCAGCCTAAATTTAGACCAAATCCATTCAATCCTAAAGCAAGATTAATGCCAAATCCTATAAGTCATAAAATGCAATTCCATGCTAAATCAATGCCTAATAAAATGATGCCTCAAAAGATTGTCGCTCCACCAAAGCCAATACCAATTAAAACTTCTAAGGCTCAACAGAACAACTTACCGTATCCGCTTCGTATAAAGGCTCTTAAAGACTTACAAATTAAGAAAAAGGAACCACAAATTTTAAAAACGTTACTTACTGCCAAACCAGAAGTCCTGGTGTCAGAACCTGAAATAATTAATTCGGGACCTGAAAGTCCAGAAACATTAATTTCGGAGCCAGAGATAGCATCGTTTCAAGTTGAAACAATCTTGTCTGAACCAGATGGTTATGTAAACCAACATGATGATGTAAACCAACATGATGATGAAAATGATGAAGATAATAACCAAGCACAGAATTATGATACTGTCGATATGGATTCAGAGAATGAAATTGAAATAGCTCGACAACAAGCAAATGACGACGTTCAAGGCGATGAACATCTTGAAGACAACGATACGGGAGATAACGGACACGATGAAAATAATATTGAGGATGTTAATGAGGATAACGAGAAAGAGCAACGTGATGATAATGGCGAAAGTCAAGATAATATGGACACGGAGAACAATATTGACGAAGAAGCAGACAATGTCGATAATATTAAGGAAAATGACGAAAATGGTGAAAATGAGGAACATAACCAGGAAGATAATGAAGAAGACGATGATTTACCTCCTATGACCATTGCACCTGTTGTTGAAATAAACGAGGATATGCAAACAAATACTTATAATAGTGATGGAAATGAGGAAGAACTTGATGAAACTGTTGATCCTAACGATACAGTTGACGGTGATGAAGCTGAAAAAGATGTTGATCCggataaaatttacattactaAAACTCAAAGAGATTTTATTCTTAAGTACCGCGATATTATTCAACAAATTAATACCAAACGTTGTCTCTGTTGCAACAAAGAACATCCACGTCGAAAAGCTGTTATTCAACATCTGCAGAAAAATGGACATAAAGTTCCTAAGCATACATGTTATAATTGTGTGGTAACCTTTACACACATAGGAGCATTGCTTAGTCATATGAGATCCAATACTTGTACTGatctttggaaaataatttacaacgaAAATGGTATTACTGATGATATTGTATTGGAAGACGAACCCAAAGACGTAAAAGTCCAATACAAAGATATTCTTAATGCTAGATCGTACGTGTGCAAGTTGTGTCCCGCGAAATTTCAATTGAAGCAATTTATAATGAAACACGTTCTTGATGTACATGAAGATGGTCAATCTCGTTTTCCACATTCTTGTGTGCACTGTGGTTTGCGATTTAAGGATAAGAGCATAGGTAAAAGACACATTCGTAATGGTGATTGTACAGTCGAAATTTGCTGCGAATTATGTTCAGAGAGGTTTTTAAGTTTGCAAGATTTTAACGAACACGCCGTAGCTATTCATGCTGGCAGCTTTGATCCTGACAATCAGAGTAAATGTGTCGATGGTCGACCTACGGATTGCCCTATATGCGGAAAGAAGAACAGTAGCTATCCGAATCTggtgaaacatttaaaaattatacacaaCGAAGAAAAACCACATCACTGTCAGCACTGTGATGCTAAATTTGAACAAACGGCCGATCTTAACAAACATATATACGTCGAACATTCTGATAGATCATTAGGCATGCAAACTATTGAACCCGATATATCTCTTGTAAAAGAGGAAGCAGAAGAGTATCATTACTCGTGCACTGAATGTAATGCTATATTTGAGACGGTCGATGCTTGGACTGATCATCAGGTAGCGGAACACAACCAAGTTGCCCATCACTGCGACCAATGTGAAAAGAAGTTTTTGCGTCCATCAGAACTTGCAGAACATAAAAACACTCACTTAAGAGTTAAATTTTACCCTTGTAGCGTTTGTTCCAACTCATATAGTACACCGCAAAAATTGACGGAACACGCACAAAAAGCTCACCCTGGAGCCCCTATACGCACGCCTGGTGAATCTGAATTTTATTGTGACATATGTATACGATCGTTCAAAAGCCGCCAGGCTTATTCTAACCACATGCGTATTCACTCAAAAGTGCCTACAACTAATAGAAAACCTGGCGAATCAAGAGGTTTTGGACCTCAAATTATTGGTAAACCAATTCGTCATTTCTCTATGCAGCCCGGCTTTAGTCCGTACGTACCAAATGCACCTTACTCTTGTGATATTTGTGGCAAAGGATTTATGCATAAGAAAAACATATGGAAACATAAAAAGGTTCTCCATGCAGATCTTCTTAATGACAGGAACGATAGTGAAGAAAACACTATGCAAGCTTCCACAGAAGAAGATGAATACAATGTAGATGAGAACGGCGCAATTTTATCGACTCCCCAgtttaatagttttaattttacaaatctAACTAATAATATGCAACAGACGTCACAAGACGCCTTGCCGTATTCTTGTGAAATATGTTACAAAAGATTCCCGCTAAGGACTAGTCTATGGAAGCACAAACGCGCTAAACATGGTATTATTAATACAGCATCTGAAACACAAACACAGTCTTCGGGTGAAGGTAGATCGAGCTGtactatttgtaaaataactTTTTCAGACAAAAAGTCGTATTATAGGCACAGAAAAACGATCCATAAATCTACAGTTCAAATGTGTAAAATATGCGGAAAACCTCTTAATTCAACTCTAGAGCTTTATGAACATCTTAAAGCGGCTCACGCACGAGAGTTGTTGGGATACAATGCTAATCAAGGATCTAGTAAATCTCAAGATATGGGTCAAGAGATGGATGGAGAGTATGATGGAGACCAAGATTCAGCTGATCCCAGCCAAGACTACCAAGCCCGTTATCCCTGCGACACATGTGGCAAACAATTTGTTGGATTATTGGCTCTTCAAAATCACCAATGTATCAACCAGCTACCAAGCCAATCTCAGACATTTGATTGTGAAATCTGTCACAAGAGTTACTATTCTATCGCTGCCTTGAAGAGCCATCGGGGTTGGCACTTGCGTTCTCCCGACGGTAAAGCTGCAGCCAATAACAGTGGACTTTGGATGCCTCAGAACAAAGTAACCAGTAAAGTGAGCAAACATGAAGTGGTAGAGACAGTTCCTAAGGCACAGACATCGACACCGGCGTCTATAGCTAAACGGAGATTGCCTCCGGAGGTAGAAGTGACAGTCGTAAatcctaataaaaaactacggTCAGACGACTCGGTGGAAATGGATCACCAGAACAATTTATCAGGTGGAGCCGAGGACAGGTATTGCAACATTTGTGACAAAGAGTTTACAAAGCGAGCGGCGTACCAACGTCACATGGACGAAGTTCACCAACCGAATTCCGTCTTTTGTCCCGTCTGCGACAAGAGCTTTACGAGGAAATCAACTCTGATCGTGCACATGAAGAAGCACTACGAAGGTGGGGAAGGGAGTTCCACGCAAATGGATGACGACTTGCATGCTTGTGACGTATGTGGGGCCCAATTCGAAAGCTCAAAGGCTCTGAATTCCCATCGGACTATGCATCACGGAGATGAATCAGCGGAGTCCGAGGACGATGGGGGAGCCCCCGCAGCACCGCCTGGAGAGTTTACTTGCGGTCAGTGTGGTGACGGTGTGGCCACCCCGAGGGACCTCATAGCCCACCGATCAATGCACGCCACCCCCACAAAATTCTTCTGTAACATTTGCAAGGTTTACTTCGCTCGAGCTCTCGACTTATCCTCTCACACGCGAGCCAGGCACTCCGATAACGAGAAAGTATTCTTCCCTTGTGCTATGTGCGACCGATTCTATATGAATAAGAAGAGTCTACAACGGCACATCGAGATGGCGCACTGA
Protein Sequence: MSVNYDSVCRLCLSSHCELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDELPTNVCRKCTDNVNNWFIFKSVCERAQNKLQTLFNKDSSQLEEVKIKSEPLSDEAYDDGVVIDGSYPDSENAGSSTRLQPEGPPILASLGLTPKSDKGMESEKEEDYEGEDEMTEQQTFTNMPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHNFDRYTNKTANKKSHTHMQPKFRPNPFNPKARLMPNPISHKMQFHAKSMPNKMMPQKIVAPPKPIPIKTSKAQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDGYVNQHDDVNQHDDENDEDNNQAQNYDTVDMDSENEIEIARQQANDDVQGDEHLEDNDTGDNGHDENNIEDVNEDNEKEQRDDNGESQDNMDTENNIDEEADNVDNIKENDENGENEEHNQEDNEEDDDLPPMTIAPVVEINEDMQTNTYNSDGNEEELDETVDPNDTVDGDEAEKDVDPDKIYITKTQRDFILKYRDIIQQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDVKVQYKDILNARSYVCKLCPAKFQLKQFIMKHVLDVHEDGQSRFPHSCVHCGLRFKDKSIGKRHIRNGDCTVEICCELCSERFLSLQDFNEHAVAIHAGSFDPDNQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHHCQHCDAKFEQTADLNKHIYVEHSDRSLGMQTIEPDISLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLTEHAQKAHPGAPIRTPGESEFYCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGESRGFGPQIIGKPIRHFSMQPGFSPYVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEEDEYNVDENGAILSTPQFNSFNFTNLTNNMQQTSQDALPYSCEICYKRFPLRTSLWKHKRAKHGIINTASETQTQSSGEGRSSCTICKITFSDKKSYYRHRKTIHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQDMGQEMDGEYDGDQDSADPSQDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQSQTFDCEICHKSYYSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVVETVPKAQTSTPASIAKRRLPPEVEVTVVNPNKKLRSDDSVEMDHQNNLSGGAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSTQMDDDLHACDVCGAQFESSKALNSHRTMHHGDESAESEDDGGAPAAPPGEFTCGQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01092294;
90% Identity: iTF_00985356;
80% Identity: -