Basic Information

Insect: Euphydryas editha
Gene Symbol: -
Assembly: GCA_036937285.1
Location: JAUPFZ010000009.1:6836822-6845283[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0036 0.52 12.2 1.0 3 23 207 228 206 228 0.96

2 22 0.035 5 9.1 0.6 1 22 617 638 617 638 0.95

3 22 2.2 3.2e+02 3.4 0.3 1 22 680 701 680 703 0.83

4 22 0.019 2.7 10.0 1.0 3 21 714 732 713 733 0.94

5 22 0.0045 0.65 11.9 0.1 3 23 783 804 781 804 0.96

6 22 0.012 1.7 10.6 3.4 1 23 810 833 810 833 0.94

7 22 0.095 14 7.7 0.0 1 23 859 882 859 882 0.90

8 22 0.014 2 10.3 3.4 1 23 887 909 887 909 0.97

9 22 0.00055 0.079 14.8 0.2 1 23 915 938 915 938 0.96

10 22 0.00078 0.11 14.3 1.3 1 23 951 973 951 973 0.98

11 22 0.0011 0.16 13.8 4.0 1 23 1016 1039 1016 1039 0.96

12 22 0.00095 0.14 14.0 1.3 1 23 1099 1122 1099 1122 0.96

13 22 0.00023 0.032 16.0 2.3 2 23 1143 1165 1142 1165 0.96

14 22 0.066 9.4 8.2 0.1 2 23 1171 1193 1170 1193 0.93

15 22 0.0013 0.19 13.6 0.4 1 23 1237 1260 1237 1260 0.97

16 22 0.00093 0.13 14.1 0.6 1 23 1268 1290 1268 1290 0.93

17 22 6.6e-05 0.0095 17.7 0.3 2 23 1378 1400 1378 1400 0.93

18 22 1.3e-07 1.9e-05 26.1 1.1 3 23 1407 1427 1406 1427 0.98

19 22 0.02 2.8 9.9 2.5 1 23 1443 1465 1443 1466 0.93

20 22 0.071 10 8.1 0.0 1 23 1487 1509 1487 1509 0.98

21 22 3.4 4.8e+02 2.9 0.4 2 23 1516 1538 1515 1538 0.89

22 22 0.00019 0.028 16.2 0.4 1 23 1546 1569 1546 1569 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0036	0.52	12.2	1.0	3	23	207	228	206	228	0.96
2	22	0.035	5	9.1	0.6	1	22	617	638	617	638	0.95
3	22	2.2	3.2e+02	3.4	0.3	1	22	680	701	680	703	0.83
4	22	0.019	2.7	10.0	1.0	3	21	714	732	713	733	0.94
5	22	0.0045	0.65	11.9	0.1	3	23	783	804	781	804	0.96
6	22	0.012	1.7	10.6	3.4	1	23	810	833	810	833	0.94
7	22	0.095	14	7.7	0.0	1	23	859	882	859	882	0.90
8	22	0.014	2	10.3	3.4	1	23	887	909	887	909	0.97
9	22	0.00055	0.079	14.8	0.2	1	23	915	938	915	938	0.96
10	22	0.00078	0.11	14.3	1.3	1	23	951	973	951	973	0.98
11	22	0.0011	0.16	13.8	4.0	1	23	1016	1039	1016	1039	0.96
12	22	0.00095	0.14	14.0	1.3	1	23	1099	1122	1099	1122	0.96
13	22	0.00023	0.032	16.0	2.3	2	23	1143	1165	1142	1165	0.96
14	22	0.066	9.4	8.2	0.1	2	23	1171	1193	1170	1193	0.93
15	22	0.0013	0.19	13.6	0.4	1	23	1237	1260	1237	1260	0.97
16	22	0.00093	0.13	14.1	0.6	1	23	1268	1290	1268	1290	0.93
17	22	6.6e-05	0.0095	17.7	0.3	2	23	1378	1400	1378	1400	0.93
18	22	1.3e-07	1.9e-05	26.1	1.1	3	23	1407	1427	1406	1427	0.98
19	22	0.02	2.8	9.9	2.5	1	23	1443	1465	1443	1466	0.93
20	22	0.071	10	8.1	0.0	1	23	1487	1509	1487	1509	0.98
21	22	3.4	4.8e+02	2.9	0.4	2	23	1516	1538	1515	1538	0.89
22	22	0.00019	0.028	16.2	0.4	1	23	1546	1569	1546	1569	0.96

Sequence Information

Coding Sequence: atGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCAATGCGAATTACTACCGATATTtcctaccaccagttcggatgACTCGGAACCTCCTGTCCTCGCTTCGAAAATCAAAGATTGCGTGTCCGTGCAAATTAGCGTAAATGACGACCTGCCAACTAATGTCTGCAGGAAATGCATGGACAATGTTAATAACTGGTTTATTTTTAAGACAGTTTGTGAAAGGGCTCAGAACAAACTACAAAGTTTGATTAATAAGGAGAGCAGCCAACTGGAAGAGGTGAAAATAAAAAGTGAACCCTTATCAGATGAAGCTTATGATGATGGAGTGGTTATTGATGGATCATATCCAGATAGTGAGaaTGCAGGCTCATCAATTAGACTGCAACCTGAAGGGCCACCTATTTTGGCTTCACTTGGACTTACACCGAGAAGTGATAAGGGAATGGAGAGTGAGAAAGAAGAGGATTATGAAAATGAGGAAGAAATGATCGAACAGCAAACCTTAACAAATATGCCTACCATGCCAGAAGTGTCGATTACCGTTATGCGCCCTTCAGGGGAAACTCTTCATGCTCGCCAAGGTATTCAACAACTTGCTTCCAAGGATTGCTTAGTTTGCGGCCGATCATATAGATACTCTCATAATGCTCGGCGCCATGAACTTACAGCACACAATTTCGATAGATATAccaataaaattactaataaaagGTCTCACACACATATGCAGCCTAAATTTAGACCAAACCCATTCAATCCTAAAGCGAGATTAATGCCAAATCCTATAAGCCATAAAAAGCAGTTCTATTCGAAATCCATGCCTACTAAAATGATGCCTCAGAAGATTGTCGCTCCACCAAAGCCAATACCAATAAAAACGTCTAAGGCTCAACAAAATAACTTACCATATCCACTTCGTATAAAGGCACTTAAAGACCTacaaattaagaaaaaagaaCCACAAATTTTAAAGACATTACTTACTGCTAAACCAGAAGTCCTGGTTTCTGAACCCGAAATAATCAATTCGGGACCTGAAAGTCCAGAAACATTAATTTCTGAGCCAGAGATAGCATCATTTCAAGTTGAAACAATCTTGTCTGAACCAGATGGTTTTGTGAACCAACATCATGAAGATGATGAAAATGACGACGAAAACAACCAAGGACAGAATTATGATACTGTCGAAATGGATTCTGAAAATGAAATAGAAATAGCTCGTCAACAAGAGAATCATGATGTTCAAGGCGATGAACATCATGATGTGAACGACGCTGAAGATAACACTCAAGAAGATGAGAATAATATTGAGGAGGTAAATGAGGATAACGAGAAAGAGCATCCTGAGGATAATGGAGAAAGTCAAGATAATATGGACATTGAGAACAATATGGACATTGAGAATAATTTTGACGATGAAGCGGACGATGCTGATAATGCCAAAGAAAACGAAGAAGATAATGAGGGAAAAGAAAATGACGAACAAAATATTAACCACGAAGAAAATGAAGAAGACGAAGATCTTCCTCCCATGAGCATTGCCCCTGTTGTTGAAATAAACGAGGATATGCAAACAAATTCTTATAATAGTGATGGAAATGAGGAAGAACTTGATGAAACTGTTGATCCAAATGATGCAGTTGATGGTGATGAAGTTGAAAAAGATGTTGATCcagataaagtttatattaccAAAACTCAGAGAGACTTTATTCTCAAATACCGAGATATCATACAACAAATCAATACAAAGCGATGTCTTTGTTGCAACAAAGAACATCCACGTCGGAAAGCTGTAATTCAACATTTACAGAAAAATGGACATAAAGTTCCTAAGCATACATGTTATAACTGTGTGGTAACTTTTACACATATAGGAGCATTGCTCAGTCATATGAGATCCAATACTTGCACTGATCTATGGAAAATAATCTACAATGAAAATGGTATTACTGATGATATAGTTTTAGAAGACGAACCCAAAGACGTAAAAGTTCAATATAAAGACATTCTTAATGCTAGATCTTACGTATGTAAATTATGTCCAGCTAAATTTCAATTGAAGCAATTTATTATGAAACATGTTCTTGATGTACATGAAGATGGCCAATCTCGTGTTCCAAATTCTTGTGTGCACTGTGGTTTGCGATTTAAGGATAAGAGCTTAGGGAAGAGGCACATTCGTAATGGAGATTGTACTGTCGAAATTTGCTGCGAATTATGTTCAGAAAAGTTTTTAAGTTTGCAAGAATTTAACGAACACGCAGTAGCTATTCACGCTGGCAGCTTTGATCCTGATAATCAGAGCAAATGTGTAGACGGTCGACCTACTGATTGTCCTATATGCGGAAAGAAGAACAGCAGCTATCCGAATTTGGTAAAacatttgaaaattatacacAATGAGGAAAAACCTCATCACTGTCAACACTGTGATGCTAAATTCGAACAAACGGCTGATCTTAACCAACATATCTACATTGAGCATTCTGATAGATCGTTAGGTATGCAAACTATTGAACCCGATATATCCCTGGTAAAAGAGGAAGCTGAAGAATATCACTACTCGTGCACTGAATGCAATGCCATATTTGAGACTGTCGATGCTTGGACTGATCATCAGGTAGCGGAACATAATCAAGTCGCTCATCATTGCGATCAATGCGAAAAAAAGTTTTTGCGTCCATCAGAACTCGCAGAACATAAGAACACCCATTTACGAGTTAAATTCTACCCTTGTAATATTTGTTCAAACTCATACAGTACACCGCAAAAGTTGACCGAACATATACAACAAGCTCACCCTGGAGCACCTATGCGCACACCTGGTGAATCTGAATTTTATTGTGACATATGTATACGATCATTCAAAAGCCGCCAGGCTTATTCGAACCACATGCGTATTCACTCAAAAGTGCCTACAACTAATAGAAAACCCGGCGAAACTAAAGGTTTTGGACCTCAAATTATTGGCAAGCCTATTCGCCACTTTTCCATGCAACCCGGTTTTAGTCCGTATGTACCAAACGCACCCTATTGTTGTGATATTTGTGGCAAAGGATTCATGCACAAGAAAAATATATGGAAACATAAAAAGGTGTTGCATGCAGATCTTCTTAACGATAGGAACGATAGTGAAGAAAACACTATGCAAGTTTCCACAGAAGAAGATGAATACAACGTTGATGAAAACGGCGCAATATTATCGACACCtcaatttaatagttttaattttacaaatctaACGAATAGTATGCAACAGACCTCACAAGATGCCTTGCCATATTCTTGTGAAATATGTTACAAAAGATTCCCACTTAGAACTAGTCTATGGAAGCACAAACGCGCTAAACATGGAATTATCAATACAGGTGCTTCTGAAACACAAACACAGCCATCGAGTGAAGGCAGATCGAGCTGTACGATTTGCAAAATAACTTTTTCAGACAAGAAATCATATTATCGTCACAGAAAAACGGTTCACAAATCTACAGTTCAAATGTGTAAAATATGCGGAAAGCCTCTTAATTCAACTTTAGAACTTTACGAACATCTTAAAGCGGCTCATGCACGAGAGCTGTTGGGTTATAATGCTAATCAAGGTTCGAGTAAATCTCAAGATATGAGTCAAGAGATGGATGGAGAGTATGATGGAGACCAAGATTCAGTCGATCCCAGCGTTGACTATCAAGCTCGCTATCCCTGCGACACATGTGGCAAACAATTTGTCGGATTATTGGCTTTGCAAAATCATCAATGTATTAATCACTTACAAAGTCAACCTCAGACATTTGATTGTGAAATCTGTCATAAGAGTTATACTTCTATTGCTGCCTTGAAGAGCCATCGAGGTTGGCATTTGCGTTCGCCTGACGGTAAAGCAGCAGCCAATAATACTGGACTTTGGATGCCTCAGAATAAAGTTACCAGTAAAGTGAGCAAGCATGAAGTAGTAGAAACAGCTCCTAGGGCACAGACCTCGACACCGGCATCTTTAGCTAAAAGGAGACTGCCTCCGGAGGTAGAAGTGACGGTCGTGAAtcctaataaaaaattacgCTCGGACGATTCTATCGAAATGGATCACCAGAACAATCTATCAGGTGGAGCCGAGGACAGATACTGCAACATTTGCGATAAAGAGTTTACAAAGCGAGCTGCGTACCAGCGTCACATGGATGAAGTTCATCAACCGAATTCCGTGTTTTGTCCCGTCTGCGACAAGAGCTTCACGAGGAAATCAACTCTGATCGTGCATATGAAGAAGCATTACGAAGGCGGAGAAGGTAGTTCGACGCAAATGGACGATGACCTACATGCATGTGACGTATGTGGAGCCCAATTCGAAAGCGCGAAGGCTTTACATTCTCATCGGACTATGCATCACGGAGATGAATCTGCGGAGTCCGAGGACGACGGTGGAGCCCCCCTGCCGCAGCCCGGCGAGTTCACGTGCGGTCAGTGTGGCGACGGCGTCGCCACCCCGCGGGACCTCATCGCCCACCGATCGATGCACGCCACCCCGACTAAATTCTTTTGTATCGTCTGCAAGGTTTACTTCGCGCGAGCTCTCGACTTGTCCTCTCACACTCGGGCCAGACACTCCGACAACGAAAAAGTTTTCTTCCCCTGTGCTATGTGCGACCGATTCTATATGAATAAGAAGAGCTTGCAACGGCACATCGAAATGGCGCACTGA
Protein Sequence: MSVNYDRVCRLCLSSQCELLPIFPTTSSDDSEPPVLASKIKDCVSVQISVNDDLPTNVCRKCMDNVNNWFIFKTVCERAQNKLQSLINKESSQLEEVKIKSEPLSDEAYDDGVVIDGSYPDSENAGSSIRLQPEGPPILASLGLTPRSDKGMESEKEEDYENEEEMIEQQTLTNMPTMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHNFDRYTNKITNKRSHTHMQPKFRPNPFNPKARLMPNPISHKKQFYSKSMPTKMMPQKIVAPPKPIPIKTSKAQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDGFVNQHHEDDENDDENNQGQNYDTVEMDSENEIEIARQQENHDVQGDEHHDVNDAEDNTQEDENNIEEVNEDNEKEHPEDNGESQDNMDIENNMDIENNFDDEADDADNAKENEEDNEGKENDEQNINHEENEEDEDLPPMSIAPVVEINEDMQTNSYNSDGNEEELDETVDPNDAVDGDEVEKDVDPDKVYITKTQRDFILKYRDIIQQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDVKVQYKDILNARSYVCKLCPAKFQLKQFIMKHVLDVHEDGQSRVPNSCVHCGLRFKDKSLGKRHIRNGDCTVEICCELCSEKFLSLQEFNEHAVAIHAGSFDPDNQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHHCQHCDAKFEQTADLNQHIYIEHSDRSLGMQTIEPDISLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLTEHIQQAHPGAPMRTPGESEFYCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGETKGFGPQIIGKPIRHFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQVSTEEDEYNVDENGAILSTPQFNSFNFTNLTNSMQQTSQDALPYSCEICYKRFPLRTSLWKHKRAKHGIINTGASETQTQPSSEGRSSCTICKITFSDKKSYYRHRKTVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQDMSQEMDGEYDGDQDSVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINHLQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTSKVSKHEVVETAPRAQTSTPASLAKRRLPPEVEVTVVNPNKKLRSDDSIEMDHQNNLSGGAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSTQMDDDLHACDVCGAQFESAKALHSHRTMHHGDESAESEDDGGAPLPQPGEFTCGQCGDGVATPRDLIAHRSMHATPTKFFCIVCKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01092294;
90% Identity: iTF_01079235;
80% Identity: -