Basic Information

Insect: Nymphalis c-album
Gene Symbol: -
Assembly: GCA_905332345.1
Location: CAJOBY010000014.1:7952735-7965869[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.3e-05 0.0055 17.5 2.2 1 23 411 433 411 433 0.97

2 18 0.0053 0.4 11.7 0.7 1 20 439 458 439 461 0.94

3 18 2.8e-05 0.0022 18.8 4.4 1 23 480 502 480 502 0.98

4 18 0.00017 0.013 16.4 4.7 1 23 508 530 508 530 0.99

5 18 3.2e-05 0.0024 18.7 5.3 1 23 536 558 536 558 0.97

6 18 9.2e-05 0.007 17.2 6.7 1 23 564 586 564 586 0.97

7 18 0.00021 0.016 16.1 5.6 1 23 592 614 592 614 0.97

8 18 4.4e-07 3.4e-05 24.5 1.9 1 23 620 642 620 642 0.98

9 18 8.7e-06 0.00067 20.4 7.7 1 23 648 670 648 670 0.98

10 18 7.5e-06 0.00057 20.6 6.4 1 23 676 698 676 698 0.98

11 18 7.6e-06 0.00058 20.6 6.5 1 23 704 726 704 726 0.98

12 18 8.5e-06 0.00065 20.5 6.4 1 23 732 754 732 754 0.97

13 18 2e-05 0.0015 19.3 7.1 1 23 760 782 760 782 0.97

14 18 2.8e-06 0.00021 22.0 6.0 1 23 788 810 788 810 0.98

15 18 0.00012 0.0094 16.8 10.0 1 23 816 838 816 838 0.97

16 18 1.8e-06 0.00014 22.6 5.2 1 23 844 866 844 866 0.98

17 18 0.00049 0.038 14.9 0.3 1 23 873 895 873 895 0.96

18 18 0.013 1 10.4 5.3 1 23 906 928 906 928 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.3e-05	0.0055	17.5	2.2	1	23	411	433	411	433	0.97
2	18	0.0053	0.4	11.7	0.7	1	20	439	458	439	461	0.94
3	18	2.8e-05	0.0022	18.8	4.4	1	23	480	502	480	502	0.98
4	18	0.00017	0.013	16.4	4.7	1	23	508	530	508	530	0.99
5	18	3.2e-05	0.0024	18.7	5.3	1	23	536	558	536	558	0.97
6	18	9.2e-05	0.007	17.2	6.7	1	23	564	586	564	586	0.97
7	18	0.00021	0.016	16.1	5.6	1	23	592	614	592	614	0.97
8	18	4.4e-07	3.4e-05	24.5	1.9	1	23	620	642	620	642	0.98
9	18	8.7e-06	0.00067	20.4	7.7	1	23	648	670	648	670	0.98
10	18	7.5e-06	0.00057	20.6	6.4	1	23	676	698	676	698	0.98
11	18	7.6e-06	0.00058	20.6	6.5	1	23	704	726	704	726	0.98
12	18	8.5e-06	0.00065	20.5	6.4	1	23	732	754	732	754	0.97
13	18	2e-05	0.0015	19.3	7.1	1	23	760	782	760	782	0.97
14	18	2.8e-06	0.00021	22.0	6.0	1	23	788	810	788	810	0.98
15	18	0.00012	0.0094	16.8	10.0	1	23	816	838	816	838	0.97
16	18	1.8e-06	0.00014	22.6	5.2	1	23	844	866	844	866	0.98
17	18	0.00049	0.038	14.9	0.3	1	23	873	895	873	895	0.96
18	18	0.013	1	10.4	5.3	1	23	906	928	906	928	0.99

Sequence Information

Coding Sequence: ATGAATCCTgatcatcataatataaatacggGTGGTGGCCAACCTCCAGGCAGTGCTGAGGCTCAGAATCAAAGAGTGCAATCAACGCAGCAACAACAGCAGGCTCAAGCTAATAACTTGACTCCGACAACATCTGCTACTGATTTGAGAGTTAACTCAGCGGCGGTAAACGTTGCTTTGTCAAGCGTGGCGAAATACTGGgtgtttacaaatttatttcccGGTCCAATACCTCAGGTTTCCGTATATGGGTTACCCACCGGTGCGAGAATTGAAAATGGGAAGCCTGTAcagGATCTTGGACAGGCACATGCAAGTCTTCTAAATGGAGatcctaatattatattaggacATGCAGGACAACAACAAGTTACTGTTTCGGCAGGGGGCCAACAAATTCCTGTTTCACAGATTATTGCAAATCAAGCAACACAAGGCCATGAGTCACTGGTGGCGCACGGCGCGGCCGAGGGCGGCGGTGCCACGCTGTCGGTGGCGGCCGCGCAGACCCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACATAACATTGATATGGGCCATCACTCTCAGCAACATTTAATGCAGCAACAGCTGATGGCTGCCACCCGTCCAGAACATTCTAATCAGCAGATACAATTGACGGTAAGCGAGGACGGCATCGTGACCGTGGTAGAGCCGGGCGGCGGCAAGCTGGTGGACAAGGACGAGCTGCACGACGCCATCAAGATGCCCAACGACCACACGCTCACCGTACACCAGCTGCAGCAGATCGTGGGCCACCACCAGgtGATAGACAGTGTGGTCCGCATCGAGCAAGCCACAGGCGAGCCGGCCAACATCCTCGTGACGCAGAACCCGGATGGCACCACGTCCATAGAGACCAGCGCCGCCGACCCGCTCATTGTAAAAGATGAGAAAAACGTCTCCAAGATTGAGTCTACGCAGTTCGCGATACCCGCCGACATTAAAGATATCAAGGGAATTGACTTAAAGAGTGCTATGGGTATGGAAGGGGCGGTGGTCAAAATATCTACTGGAACAGAACATGATCTTCACGCCATGTACAAAGTTAATGTAGAGGATCTTTCACAATTACTTGCCTATCACGAAGTATTTGGAAAACTTAATTCTGAAGGCCAACCACAAGCAAAGGTGATCAGCGAGGTGGAGGTGGAGGCGGGCACGAGCGCCGCGCTGTCGGAGGCCGAGTCGTCGCCCGGACACCACTCGTGCGACATCTGCGGGAAGATCTTCCAGTTCCGATACCAGCTCATCGTCCACAGaCGATACCATGGAGAGAGCAAACCATTTACATGTCAAGTGTGTGGTTCTGCATTCGCCAATCCAGTAGAACTTTCGAAACACGGAAAATGTCATCTCgCCGGTGACCCCGCCGAGCGCCAAGCGAAACGATTGGCTCAAGACAAACCGTATGCTTGCTCCACTTGCCATAAGACATTCGCACGTAAGGAACATCTCGACAATCATGTCAGAAGCCACACCGGGGAGACGCCATACAGATGTCAGTTCTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACTCCACATCGCTGTGACTTCTGCTCCAAGACATTTACCCGTAAAGAACACTTACTAAACCACGTGCGCCAGCATACGGGCGAGTCTCCTCATCGGTGCAACTTCTGCGCCAAATCCTTCACACGGCGCGAACATCTTGTAAATCACGTCCGCCAACATACGGGTGAAACGCCATTTCAATGTGGTTATTGTCCTAAAGCATTCACTCGAAAAGATCATCTTGTGAATCACGTCCGCCAGCACACCGGGGAGTCCCCTCACAAATGTTCTTATTGCACAAAGTCATTCACGCGAAAGGAACATCTAACCAACCACGTACGGCAACACACAGGCGAGTCCCCCCACCGGTGTTCATACTGCGCGAAGTCCTTTACAAGAAAAGAACATCTTACTAACCATATAAGACAGCATACGGGGGAGACTCCTCACAAGTGCACGTATTGCTCTCGCGCCTTCACGCGGAAGGAACACCTCAACCAACACATCAGACAACATACCGGGGACATGCCACATACCTGTTCATATTGTAACAAGAGTTTCACGAGGAAAGAACATCTTGTCACGCATGTACGACAACATACTGGAGAGACACCATTCAAGTGTACATATTGTTCGAAGTCGTTTTCTCGAAAAGAACATCTCACCAACCACGTACATCTTCATACAGGCGAGACGCCACATAAATGCCCCTTCTGTACAAAGACTTTCTCGAGAAAAGAACATTTGACTAATCATGTTAGAATACACACTGGTGAGTCTCCTCATCGATGTGAATTTTGTCACAAGACATTTACGCGTAAAGAACACCTTACGAACCATCTCAAGCAGCACACTGGAGACACACCTCACACTTGCAAAGTGTGTTCTAAGCCTTTCACGAGAAAGGAGCATCTTATCACGCATATGAGgtCACATAGTTGTGGAGAAAGGCCGTACAGTTGCGGTGAATGTGGAAAATCGTTCCCATTGAAAGGCAATTTGCTATTTCATGAGAGATCACACAACAAGAGTTCCAATTCTGCTAATAAATCTTTCCGATGTGAAATTTGCTCAAAGGAATTTATGTGCAAAGGTCATCTAGTATCGCATAGACGAACGCATACAGATGCAGTTGAAAATGCAGTTAGTACGGAACCGGCGACTGAAGGCGAAGACTGCGGAGACTGCAATAAATGTGAAAAAGATGTGCCAGAGAGAAAACATGATACAAGAGCATCATCAGAAAGTAGAGCTACTGAGGCAAATGTAGCACAAAGTCAAACGACTAGTTCAGCAGTTATGCAAATAACCAGCCAGCAAGTTCGAACCGGAACTGCTACTAGTGTAGCAAGCGTGGCAGCTGGCACTTTCACTCACACAACAAATACCCAACACCATACGGGTACGACCATAGCACATCATCCAGTCACAGTGAATTACTAG
Protein Sequence: MNPDHHNINTGGGQPPGSAEAQNQRVQSTQQQQQAQANNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQAHASLLNGDPNIILGHAGQQQVTVSAGGQQIPVSQIIANQATQGHESLVAHGAAEGGGATLSVAAAQTQQVPNNRVEFVQHNIDMGHHSQQHLMQQQLMAATRPEHSNQQIQLTVSEDGIVTVVEPGGGKLVDKDELHDAIKMPNDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLIVKDEKNVSKIESTQFAIPADIKDIKGIDLKSAMGMEGAVVKISTGTEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQAKVISEVEVEAGTSAALSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRQHTGETPHKCTYCSRAFTRKEHLNQHIRQHTGDMPHTCSYCNKSFTRKEHLVTHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHTCKVCSKPFTRKEHLITHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKSSNSANKSFRCEICSKEFMCKGHLVSHRRTHTDAVENAVSTEPATEGEDCGDCNKCEKDVPERKHDTRASSESRATEANVAQSQTTSSAVMQITSQQVRTGTATSVASVAAGTFTHTTNTQHHTGTTIAHHPVTVNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00985351;
90% Identity: iTF_01508241; iTF_00824936; iTF_01080074; iTF_01080896; iTF_01506532; iTF_00796691; iTF_01507413; iTF_01078392; iTF_01079227; iTF_00843711;
80% Identity: -