Basic Information

Insect: Vanessa atalanta
Gene Symbol: -
Assembly: GCA_905147765.1
Location: LR990557.1:4545176-4559455[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 6.9e-05 0.0053 17.5 2.2 1 23 411 433 411 433 0.97

2 20 0.005 0.39 11.6 0.7 1 20 439 458 439 461 0.94

3 20 2.7e-05 0.0021 18.7 4.4 1 23 480 502 480 502 0.98

4 20 0.00016 0.012 16.3 4.7 1 23 508 530 508 530 0.99

5 20 3e-05 0.0023 18.6 5.3 1 23 536 558 536 558 0.97

6 20 9.7e-06 0.00075 20.1 7.3 1 23 564 586 564 586 0.97

7 20 6.1e-07 4.7e-05 23.9 2.9 1 23 592 614 592 614 0.97

8 20 8.7e-05 0.0067 17.1 6.7 1 23 620 642 620 642 0.97

9 20 0.0002 0.015 16.0 5.6 1 23 648 670 648 670 0.97

10 20 4.2e-07 3.2e-05 24.4 1.9 1 23 676 698 676 698 0.98

11 20 8.2e-06 0.00064 20.4 7.7 1 23 704 726 704 726 0.98

12 20 6.8e-06 0.00052 20.6 6.6 1 23 732 754 732 754 0.98

13 20 2.2e-05 0.0017 19.0 7.1 1 23 760 782 760 782 0.98

14 20 8.1e-06 0.00062 20.4 6.4 1 23 788 810 788 810 0.97

15 20 1.9e-05 0.0015 19.2 7.1 1 23 816 838 816 838 0.97

16 20 2.6e-06 0.0002 21.9 6.0 1 23 844 866 844 866 0.98

17 20 0.00012 0.009 16.7 10.0 1 23 872 894 872 894 0.97

18 20 2.4e-06 0.00018 22.1 5.8 1 23 900 922 900 922 0.98

19 20 0.00047 0.036 14.8 0.3 1 23 929 951 929 951 0.96

20 20 0.012 0.96 10.4 5.5 1 23 962 984 962 984 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	6.9e-05	0.0053	17.5	2.2	1	23	411	433	411	433	0.97
2	20	0.005	0.39	11.6	0.7	1	20	439	458	439	461	0.94
3	20	2.7e-05	0.0021	18.7	4.4	1	23	480	502	480	502	0.98
4	20	0.00016	0.012	16.3	4.7	1	23	508	530	508	530	0.99
5	20	3e-05	0.0023	18.6	5.3	1	23	536	558	536	558	0.97
6	20	9.7e-06	0.00075	20.1	7.3	1	23	564	586	564	586	0.97
7	20	6.1e-07	4.7e-05	23.9	2.9	1	23	592	614	592	614	0.97
8	20	8.7e-05	0.0067	17.1	6.7	1	23	620	642	620	642	0.97
9	20	0.0002	0.015	16.0	5.6	1	23	648	670	648	670	0.97
10	20	4.2e-07	3.2e-05	24.4	1.9	1	23	676	698	676	698	0.98
11	20	8.2e-06	0.00064	20.4	7.7	1	23	704	726	704	726	0.98
12	20	6.8e-06	0.00052	20.6	6.6	1	23	732	754	732	754	0.98
13	20	2.2e-05	0.0017	19.0	7.1	1	23	760	782	760	782	0.98
14	20	8.1e-06	0.00062	20.4	6.4	1	23	788	810	788	810	0.97
15	20	1.9e-05	0.0015	19.2	7.1	1	23	816	838	816	838	0.97
16	20	2.6e-06	0.0002	21.9	6.0	1	23	844	866	844	866	0.98
17	20	0.00012	0.009	16.7	10.0	1	23	872	894	872	894	0.97
18	20	2.4e-06	0.00018	22.1	5.8	1	23	900	922	900	922	0.98
19	20	0.00047	0.036	14.8	0.3	1	23	929	951	929	951	0.96
20	20	0.012	0.96	10.4	5.5	1	23	962	984	962	984	0.99

Sequence Information

Coding Sequence: ATGAATCCTGATCATCATAATATAAACACGGGTGGTGGCCAACCTCCAGGCAGCTCTGAGGCTCAAAATCAAAGAGTGCAATCGACGCAGCAACAACAGCAGGGTCAAGCTAATAACTTGACTCCGACAACATCTGCTACTGATTTGAGAGTAAACTCAGCGGCGGTAAACGTTGCTTTGTCAAGCGTGGCCAAATACTGGGTGTTTACAAATTTATTTCCCGGTCCAATACCGCAGGTTTCCGTATATGGTTTACCCACTGGTGCAAGAATTGAAAATGGGAAGCCTGTACAGGATCTTGGGCAGGCTCATGCAAGCCTTCTAAATGGAGATCCTAATATTATATTAGGGCATGCAGGACAACAACAAGTTACTGTTTCAGCTGGGGGTCAACAAATTCCCGTATCACAGATTATTGCAAATCAAGCAACACAAGGCCATGAGTCGCTGGTGGCACACGGTGCGGCGGAGGGCGGCGGCGGGACGCTGTCGGTGGCGGGCGCGCAGACCCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACATAACATTGATATGGGTCATCACTCCCAACAACATATAATGCAGCAACAGCTGATGGCTGCCACCCGTCCAGAACATTCAAACCAGCAGATCCAACTGACGGTGAGCGAGGACGGCATCGTGACGGTGGTGGAGCCGGGCGGCGGCAAGCTGGTGGACAAGGACGAGCTGCACGACGCCATCAAGATGCCCAACGACCACACGCTTACCGTGCACCAGCTGCAACAGATCGTGGGCCACCACCAGGTAATAGACAGTGTGGTCCGAATCGAGCAAGCCACAGGGGAGCCAGCCAATATCCTTGTGACGCAGAATCCGGACGGTACCACCTCCATTGAGACGAGCGCCGCCGACCCGCTCATAGTGAAAGACGAGAAGAATGTCGCCAAGATTGAGTCCACGCAGTTCGCGATACCCGCCGAGATTAAAGATATCAAAGGAATTGACTTAAAGAGTGCTATGGGTATGGAAGGGGCTGTGGTCAAAATATCCACTGGTACAGAACATGATCTTCACGCCATGTACAAAGTTAATGTAGAGGATCTATCACAATTGCTTGCCTATCATGAAGTATTTGGAAAACTAAATTCCGAAGGCCAACAACAAGCAAAGGTGATAAGCGAGGTGGAGGTGGAGGCGGGCACGAGCGCCGCGCTGTCGGAGGCCGAGTCGTCGCCCGGACACCACTCCTGCGACATCTGCGGGAAGATCTTCCAGTTCCGGTACCAGCTCATCGTCCACAGACGATACCACGGTGAGAGCAAACCATTTACGTGTCAAGTATGCGGTTCTGCGTTCGCCAATCCAGTAGAACTTTCGAAACATGGAAAATGTCATTTGGCTGGTGACCCCGCCGAACGCCAGGCGAAACGATTGGCTCAAGACAAACCGTATGCGTGCTCCACTTGCCATAAAACTTTCGCACGAAAGGAACATCTCGACAATCATGTCAGGAGCCACACCGGGGAGACGCCATACAGGTGCCAGTTCTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATCTGTAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACGCCGCACCATTGTCAAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCACATACAAATGACACTCCATTCAGATGTGAACTGTGCGGCAAGTCCTTCACGAGAAAGGAACACTTCACCAATCATATATTGTGGCATACGGGTGAAACTCCACATCGCTGTGACTTCTGTTCCAAGACATTTACGCGCAAAGAACACTTACTTAACCACGTGCGCCAACATACAGGCGAGTCTCCTCATCGGTGCAACTTCTGCGCGAAATCCTTCACACGTCGCGAACATCTTGTTAACCACGTTCGCCAACATACGGGCGAAACTCCATTTCAATGTGGTTATTGTCCTAAAGCGTTCACTCGAAAAGATCACCTTGTGAATCACGTTCGCCAGCACACGGGAGAGTCCCCTCACAAATGTTCCTATTGCACAAAGTCATTCACGCGTAAGGAACATCTAACCAACCACGTGCGGCAACACACGGGCGAGTCCCCGCATCGGTGTACATACTGCGCGAAGTCCTTTACAAGAAAAGAACATCTAACTAACCATATACGACAGCATACGGGGGAGACTCCTCACAAGTGCACGTATTGCTTTCGCGCCTTCACGCGGAAGGAACATCTCAACCAACACATCAGACAACATACCGGGGACATGCCACATACCTGTTCATATTGTAACAAGAGTTTCACGAGGAAAGAACATCTTGTCACGCATGTTCGCCAACATACTGGAGAGACACCATTTAAGTGCACATATTGTTCAAAGTCTTTTTCACGCAAGGAACATCTCACGAACCATGTGCATCTTCATACAGGAGAGACACCACATAAATGCCCTTTCTGCACCAAGACTTTCTCGAGAAAAGAACATTTGACTAATCATGTTAGAATACACACTGGCGAATCGCCTCATCGATGCGAATTTTGTCATAAGACATTCACTCGCAAGGAGCATCTCACGAACCACCTCAAACAACACACTGGCGACACACCACACACTTGTAAAGTGTGCTCTAAGCCCTTCACAAGAAAGGAACATCTTATGACGCACATGAGATCGCATAGTTGTGGCGAGAGGCCGTACAGTTGCGGTGAATGTGGGAAGTCGTTCCCATTGAAAGGCAATTTATTGTTCCATGAAAGATCGCACAACAAGAGTGCAAACTCGGCAAATAAATCTTTCAGATGTGAAATTTGCTCAAAGGAATTTATGTGCAAAGGTCATCTAGTAACGCACAGACGAACACATACAGATGCAGTTGAAAATGCAGTAAGTACGGAACCAGCAACTGAAGGCGAAGACTGCGGAGATTGTAATAAATGCGAGAAAGATGTTCCAGACAGAACAGAGAGAAAACATGATACAAGAGCATCATCAGAGAGTAGAGCCACTGAAACAAATGTGGCACAAAATCAGACTACTAGTTCAGCAGTTATGCAAATAACTAGCCAGCAAGTCCGAACCGGAACTGCAACCAGTGTAGCAAGTGTAGCAGCTGGGACTTTCACTCACACAACGAATACTCAACATCATACTGGTACGACCATAGCACATCATCCTGTTACTGTGAATTACTAG
Protein Sequence: MNPDHHNINTGGGQPPGSSEAQNQRVQSTQQQQQGQANNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQAHASLLNGDPNIILGHAGQQQVTVSAGGQQIPVSQIIANQATQGHESLVAHGAAEGGGGTLSVAGAQTQQVPNNRVEFVQHNIDMGHHSQQHIMQQQLMAATRPEHSNQQIQLTVSEDGIVTVVEPGGGKLVDKDELHDAIKMPNDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLIVKDEKNVAKIESTQFAIPAEIKDIKGIDLKSAMGMEGAVVKISTGTEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQAKVISEVEVEAGTSAALSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCFRAFTRKEHLNQHIRQHTGDMPHTCSYCNKSFTRKEHLVTHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHTCKVCSKPFTRKEHLMTHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKSANSANKSFRCEICSKEFMCKGHLVTHRRTHTDAVENAVSTEPATEGEDCGDCNKCEKDVPDRTERKHDTRASSESRATETNVAQNQTTSSAVMQITSQQVRTGTATSVASVAAGTFTHTTNTQHHTGTTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247403;
90% Identity: iTF_01078391;
80% Identity: -