g5423.t1
Basic Information
- Insect
- Nymphalis c-album
- Gene Symbol
- Xbp1
- Assembly
- GCA_905332345.1
- Location
- CAJOBY010000008.1:11445097-11447151[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-17 9.7e-14 51.6 10.7 2 52 44 94 44 95 0.97 2 2 2.2e-05 0.025 15.0 0.8 32 55 88 111 86 116 0.90
Sequence Information
- Coding Sequence
- ATGAGTGCACCAATTATTATCACAGTTCCTAATAGTTATCTGGCGGTGGATGATATGGAGTCTAAAGTCGTAATCGACGTGGCTTCAAGTCCACCGTCCAGAAAACGAAGACTGGATCATCTGACATGGGAAGAAAAAATGCAAAGAAAAAAGTTGAAGAATCGCGTAGCGGCTCAAACTTCGAGGGATCGGAAAAAGGCGAAAATGGACGAAATGGAGAGCCGTATTAAAGAATGCCTGGATATGAACGAGCGGTTAGTCAGTGAAGTTGAGAAGTTGAAGGCGATGAACGAACGTCTGCTCAGCGAGAACGCAACGCTGCGCAGCGAGGCCGCGGCGCGGACCGTCGCGGGTACCCCGAGACCAGCAGAGTCTCATCCTCAGCAGaagGAGGGGCACCCGACGGCGATCCGCGCGGCGCGTCTGCTGCTGGCGATGTGCCTCCTCTCGCAGACCTCCTCGCCCATCTCGACTCTGAAGAGTACCTCGACACACTACACCAACTTGCCGACTCACTTCTCAAAGAATTTGATACAAGCCCTGCAGCAGAGATTGAAGATatcaAAGTCGGGGACAGTAGAGAGTGCCCTGAAGGAAATCAAGTGGTGGGGTCCTCAACAAAGCAACTGGAACCCAGTCAAGGTGGAGTCCTAG
- Protein Sequence
- MSAPIIITVPNSYLAVDDMESKVVIDVASSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKECLDMNERLVSEVEKLKAMNERLLSENATLRSEAAARTVAGTPRPAESHPQQKEGHPTAIRAARLLLAMCLLSQTSSPISTLKSTSTHYTNLPTHFSKNLIQALQQRLKISKSGTVESALKEIKWWGPQQSNWNPVKVES*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079618; iTF_01506084; iTF_00843243; iTF_01078803; iTF_01506906; iTF_01080475; iTF_01507806; iTF_00695200; iTF_00984765; iTF_00985735;
- 90% Identity
- iTF_01078803;
- 80% Identity
- -