Nio007046.1
Basic Information
- Insect
- Nymphalis io
- Gene Symbol
- XBP1
- Assembly
- GCA_905147045.1
- Location
- LR989903.1:11840329-11842243[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-16 1.2e-13 51.4 14.0 2 62 44 104 44 107 0.94 2 2 0.00029 0.2 12.2 0.5 32 55 88 111 87 116 0.91
Sequence Information
- Coding Sequence
- ATGAGTGCACCAATTATTATCACAGTTCCTAATAGTTATCTGGCGGTGGATGATATGGAGTCTAAAGTCGTGATCGACGTGGCTCCAAATCCACCGTCCAGAAAACGAAGACTGGACCATTTGACATGGGAAGAAAAAATGCAAAGAAAGAAGCTGAAGAATCGTGTAGCGGCTCAAACTTCGAGAGATCGGAAAAAGGCGAAAATGGACGAAATGGAGAGTCGTATTAAAGAATGCCTTGATATGAACGAGCGGTTAGTCAGTGAAGTTGAGAACTTGAAGGCGATAAACGAACGTCTGCTCAGCGAGAACGCAACGCTGCGCAGCGAGGCCGCGGCGCGGACCGTCGCGGGTACCCCGAGACCAGCAGAGTCTCAACCTCAGCAGAAGGAGGGGCACCCGACGGCGATCCGCGCGGCGCGTCTGCTGCTGGCGATGTGCCTCCTCTCGCAGACCTCCTCGCCCATCTCGACTCTGAAGAGTACCTCGACACATTACACCAGCTTGCCGACTCACTTCTCAAAGAATTTGATACAAGCCCTGCAGCAGAGATTGAAGATATCAAAGTCGGGGACAGTAGAGAGTGCCCTGAAGGAAATCAAGTGGTGGGGTCCTCAACAAAGCAACTGGAACCCAGTCAAGGTGGAGTCTTAG
- Protein Sequence
- MSAPIIITVPNSYLAVDDMESKVVIDVAPNPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKECLDMNERLVSEVENLKAINERLLSENATLRSEAAARTVAGTPRPAESQPQQKEGHPTAIRAARLLLAMCLLSQTSSPISTLKSTSTHYTSLPTHFSKNLIQALQQRLKISKSGTVESALKEIKWWGPQQSNWNPVKVES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01077926;
- 90% Identity
- iTF_01079618; iTF_01077926; iTF_01506084; iTF_01506906; iTF_01080475; iTF_01507806; iTF_00843243;
- 80% Identity
- -