Vata000154.1
Basic Information
- Insect
- Vanessa atalanta
- Gene Symbol
- xbp-1
- Assembly
- GCA_905147765.1
- Location
- LR990555.1:11562624-11564625[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-17 3.6e-14 52.8 9.9 2 52 44 94 44 96 0.97 2 2 1.9e-05 0.021 15.1 0.9 32 57 88 113 86 117 0.91
Sequence Information
- Coding Sequence
- ATGAGTGCACCAATTATTATCACAGTTCCTAATAGTTATCTGGCGGTGGATGATATGGAGTCTAAGGTCGTGATCGACGTGGGTCCAAATCCACCGTCCAGAAAACGAAGGCTGGACCATCTGACATGGGAAGAAAAAATGCAAAGAAAGAAGCTGAAAAACCGTGTAGCGGCTCAAACTTCGAGAGATCGAAAAAAGGCTAAAATGGATGAAATGGAGAGCCGGATTAAAGAATGCATGGATATGAATGAGCGGTTGGTCAGTGAAGTTGAGAACTTGAAGGCGTTGAACGAACGTCTGCTCAGCGAGAACGCAACGCTACGCAGCGAGACCGCGGCGCGGACCGTCGCGGGTACCCCGAGACCAGCAGAGTCTCAACCTCAGCAGAAGGAGGGGCACCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGCCTCCTCTCGCAGACCTCCTCGCCCATCTCGACTCTGAAGAGTACCTCGACACACTTCACCAGCTTGCCGACTCACTTCTCAAAGAATTTGATACAAGCCCTGCAGCAGAGATTGAAGATATCAAAGTTGGGGACAGTAGAGAGTGCACTCAAGGAAATCAAGTGGTGGGGTCCTCAACAAAGCAACTGGAATCCAGTCAAAGTGGAATCCTAG
- Protein Sequence
- MSAPIIITVPNSYLAVDDMESKVVIDVGPNPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKECMDMNERLVSEVENLKALNERLLSENATLRSETAARTVAGTPRPAESQPQQKEGHPTAIRAARLLLAMCLLSQTSSPISTLKSTSTHFTSLPTHFSKNLIQALQQRLKISKLGTVESALKEIKWWGPQQSNWNPVKVES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01077926;
- 90% Identity
- iTF_01078803;
- 80% Identity
- -