Basic Information

Gene Symbol
XBP1
Assembly
None
Location
HiC:17001885-17003886[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7e-17 7.1e-14 51.9 14.2 2 62 44 104 44 107 0.94
2 2 5.7e-05 0.061 13.7 0.7 32 55 88 111 86 116 0.90

Sequence Information

Coding Sequence
ATGAGTGCACCAATTATTATCACCGTTCCTAATAGTTATCTGGCGGTGGATGATATGGAGTCTAAAGTCGTAGTCGACGTGGCTTCGAATCCACCGTCCAGGAAACGGAGGCTGGACCACCTAACATGGGAAGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGTGTAGCGGCACAGACTTCGAGAGATCGGAAAAAAGCGAAGATGGATGAAATGGAGAGCCGGATTAAACAATGTATGGACATGAACGAGCGGCTAGTCAGTGAAGTGGAGACGTTAAAGGCGTTGAACGAGCGTCTGCTTAGCGAGAATGCAACGCTTCGCAGCGAGGCCGCGGCGCGGACCGTCGCGGGTGCCCCGAGACCAGCAGAGTCTCATCCTCAGCAGAAGGAGGGGCCCCCGACGGCGATCCGTGCGGCGCGTCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCCCACCTTGACTCCGAAGAGTACCTCGACACACTACACCAGCTTGCCGATTCACTCCTCAAAGAGTTTGATACAAGCTCTTCAACAGAGACTGAAGATATCAAAGTCGGGGACAATCGAGAGTGCACTGAAGGAAATCAAATGGTGGGGTCCACAACAAAGCACCTGGAATCCAGTGAAAGTGGAGTCTTAG
Protein Sequence
MSAPIIITVPNSYLAVDDMESKVVVDVASNPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKQCMDMNERLVSEVETLKALNERLLSENATLRSEAAARTVAGAPRPAESHPQQKEGPPTAIRAARLLLAMCLLSQTSSPTLTPKSTSTHYTSLPIHSSKSLIQALQQRLKISKSGTIESALKEIKWWGPQQSTWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01077926;
90% Identity
iTF_01078803;
80% Identity
-