Math011182.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- XBP1
- Assembly
- GCA_905220545.1
- Location
- HG992182.1:3804586-3806444[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-16 5.9e-13 50.0 10.1 2 52 44 94 44 95 0.97 2 2 5.9e-05 0.11 13.9 0.5 32 55 88 111 86 116 0.90
Sequence Information
- Coding Sequence
- ATGAGTGCACCAATTATTATCACCGTTCCTAATACTTATCTGGCGGTGGATGATATGGAGTCCAAAGTCGTGGTCGACGTGGCTCCAAATCCACCGTCCAGAAAAAGGAGACTGGACCATCTGACATGGGAAGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGTGTAGCTGCTCAGACGTCGAGGGATCGGAAGAAGGCGAAAATGGATGAAATGGAGGCCAGGATCAAGCAGTGCATGGATATGAACGAGAGATTAGTCGGAGAAGTGGAGACGTTGAAAGCGATGAACGAGCGTTTGCTTAGCGAGAATGCAGCGTTACGCAGCGAAGCCGCGGCGCGGACCGTCGAGGGAGCCCCGAGACCAGCAGAGTCTCAACCTCAGCAGAAGGAGGGGCACCCGGCGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCGCCCACCTCGACTCTCAAGAATACCTCGACACTCTACACGAACTTGCCGACTCACTTCTCAAAGAATTTGATACAAACACTGCAGGAGAGGCTGAAGATatcaaAGTCGGGGAAAATCGAGTCTGTGCTGAAGGAACTAAAATGGTGGGGACCACAACAAAGCAACTGGAACCCAGTAAAAGTGGAATCCTAG
- Protein Sequence
- MSAPIIITVPNTYLAVDDMESKVVVDVAPNPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEARIKQCMDMNERLVGEVETLKAMNERLLSENAALRSEAAARTVEGAPRPAESQPQQKEGHPAAIRAARLLLAMCLLSQTSSPTSTLKNTSTLYTNLPTHFSKNLIQTLQERLKISKSGKIESVLKELKWWGPQQSNWNPVKVES*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01077926;
- 90% Identity
- iTF_00984765; iTF_00695200;
- 80% Identity
- -