Basic Information

Insect: Notocelia uddmanniana
Gene Symbol: -
Assembly: GCA_905163555.1
Location: LR991052.1:32638431-32655488[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0014 0.16 14.1 0.5 1 23 123 145 123 145 0.98

2 28 0.00039 0.045 15.8 0.4 2 22 180 200 179 200 0.93

3 28 5.9e-06 0.00067 21.6 1.0 2 23 233 255 232 255 0.97

4 28 7e-05 0.008 18.2 0.5 1 23 306 329 306 329 0.95

5 28 0.085 9.8 8.5 0.1 1 23 351 373 351 373 0.96

6 28 0.002 0.23 13.6 5.3 2 23 407 428 406 428 0.97

7 28 0.0023 0.26 13.4 4.1 2 23 478 500 477 500 0.97

8 28 0.0011 0.13 14.4 1.1 1 23 550 573 550 573 0.97

9 28 0.00016 0.018 17.0 0.3 1 23 629 651 629 651 0.98

10 28 0.021 2.4 10.4 6.1 2 23 663 684 662 684 0.96

11 28 0.052 6 9.1 1.8 2 23 696 717 695 717 0.96

12 28 0.0048 0.54 12.4 1.0 1 23 727 749 727 749 0.98

13 28 0.011 1.3 11.3 7.2 1 23 777 799 777 799 0.97

14 28 0.016 1.9 10.7 4.3 1 23 810 832 810 832 0.98

15 28 1.5e-05 0.0018 20.2 0.8 1 23 840 862 840 862 0.97

16 28 0.00082 0.094 14.8 0.1 2 23 882 904 881 904 0.97

17 28 0.018 2 10.6 2.4 1 23 922 944 922 944 0.96

18 28 0.3 35 6.7 3.7 1 23 951 973 951 973 0.96

19 28 0.026 3 10.1 2.5 2 23 984 1006 983 1006 0.95

20 28 0.018 2.1 10.6 0.2 2 23 1029 1050 1028 1050 0.95

21 28 5.2 6e+02 2.8 3.9 2 23 1093 1115 1092 1115 0.94

22 28 0.029 3.3 10.0 0.1 2 23 1131 1152 1130 1152 0.92

23 28 1.7 2e+02 4.3 4.9 5 23 1162 1180 1159 1180 0.94

24 28 0.02 2.3 10.4 0.8 2 23 1191 1213 1190 1213 0.95

25 28 0.48 55 6.1 2.8 2 23 1230 1248 1230 1248 0.89

26 28 0.092 11 8.4 1.6 2 21 1252 1271 1252 1272 0.94

27 28 1.6 1.8e+02 4.5 2.6 2 23 1320 1341 1319 1341 0.93

28 28 0.0011 0.13 14.4 0.3 2 23 1352 1374 1351 1374 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0014	0.16	14.1	0.5	1	23	123	145	123	145	0.98
2	28	0.00039	0.045	15.8	0.4	2	22	180	200	179	200	0.93
3	28	5.9e-06	0.00067	21.6	1.0	2	23	233	255	232	255	0.97
4	28	7e-05	0.008	18.2	0.5	1	23	306	329	306	329	0.95
5	28	0.085	9.8	8.5	0.1	1	23	351	373	351	373	0.96
6	28	0.002	0.23	13.6	5.3	2	23	407	428	406	428	0.97
7	28	0.0023	0.26	13.4	4.1	2	23	478	500	477	500	0.97
8	28	0.0011	0.13	14.4	1.1	1	23	550	573	550	573	0.97
9	28	0.00016	0.018	17.0	0.3	1	23	629	651	629	651	0.98
10	28	0.021	2.4	10.4	6.1	2	23	663	684	662	684	0.96
11	28	0.052	6	9.1	1.8	2	23	696	717	695	717	0.96
12	28	0.0048	0.54	12.4	1.0	1	23	727	749	727	749	0.98
13	28	0.011	1.3	11.3	7.2	1	23	777	799	777	799	0.97
14	28	0.016	1.9	10.7	4.3	1	23	810	832	810	832	0.98
15	28	1.5e-05	0.0018	20.2	0.8	1	23	840	862	840	862	0.97
16	28	0.00082	0.094	14.8	0.1	2	23	882	904	881	904	0.97
17	28	0.018	2	10.6	2.4	1	23	922	944	922	944	0.96
18	28	0.3	35	6.7	3.7	1	23	951	973	951	973	0.96
19	28	0.026	3	10.1	2.5	2	23	984	1006	983	1006	0.95
20	28	0.018	2.1	10.6	0.2	2	23	1029	1050	1028	1050	0.95
21	28	5.2	6e+02	2.8	3.9	2	23	1093	1115	1092	1115	0.94
22	28	0.029	3.3	10.0	0.1	2	23	1131	1152	1130	1152	0.92
23	28	1.7	2e+02	4.3	4.9	5	23	1162	1180	1159	1180	0.94
24	28	0.02	2.3	10.4	0.8	2	23	1191	1213	1190	1213	0.95
25	28	0.48	55	6.1	2.8	2	23	1230	1248	1230	1248	0.89
26	28	0.092	11	8.4	1.6	2	21	1252	1271	1252	1272	0.94
27	28	1.6	1.8e+02	4.5	2.6	2	23	1320	1341	1319	1341	0.93
28	28	0.0011	0.13	14.4	0.3	2	23	1352	1374	1351	1374	0.95

Sequence Information

Coding Sequence: ATGTTACGCCAAGAAGCTCGAGGCGGGTCGAGCTCCACACCGGTCCCACCGAAAAGGACCAGTAGTGATTCCGTTTCTTCCACTCACACCGAGGCTACCAACCAAACAAAACCATCTCATGCCTCCGAGGTGGACTCCGCCATAAGGAACACTCGCAAGCGTAGTCACGAAAGCATTGAAATTGCTTCTGCCAGCAGCAAATCAAACGAATTCCGGCCCACTAATTCAAAACGAATTGAGGAACTGAAAAGCAGCAACAAGAAGCCTAGGCTTAGCAATTATTATGTGGATTCTGATTACGAAGATAATAGCGCATCTCAATTCTCTGCTGAAACAGATTCTGATGAACCCCTACTGAGAGACGAATTCAAGTGTAAAGTTTGCGAACGGCAGTTCCCATCGGCGAAGAGCTTAGGGGTGCATTCTCGTTCCCATTCTGGCAAAACCAACAAAGCGAAAGAGACGCTCACTGAAGATGTACTTGTAACTATTCCAAAGAAAAATGTGCAGGACGCAACTGACGTAGAAGAAAAAATTAGCTGCGAGTTTTGCGGGAAAAGTttcaaattgaaaataatgcTGAAGCGTCACCAGGAGACGTGCGGCAAGTCTCCACAAAAGACGCCTCCCAAACCGCTCCAAAAGGAATTACTCGTATCGTTGGAGCCCATAGACGGTATTCATGCTAATAGAATAAAATGTACTATGTGCACGACTACGTTCAAAACAATTGAGAATCTGCAAAAGCATATGAGAGTTGTCCACGCGGCAGTGCTTCCGGCTGTTAAAACAGAGCCGAAAGCGAACAACGGCAAGGTTTCCGTTCCTTGTATTTACTGCAAAAAACCTTTTGACGACTATTATGTTCACAGTGAACATTTCAGTAAATGTCCTGAAAGTACTAACTCGAGCACATTCTCGTGCCCAATTTGCAAGAAAGTGACAACGCGGAAGGCCGCATATTTCCGGCACATCAAGGACGTGCACTTCGAGCCGCGCATGTGGTCGCTAAAGCCGGAAACGCCGGAGCAGGGCCCAGCGGCGGCGCTGTTCGAGTGCCGCATGTGCTCCAAGCGGCTGCCCACCGAGCAGCTGCTCATCACGCACCTGGCTGCGCACGTCTCCAACATCGAGGCCACTGACGGCGACGAGTCTAGGCCAAGCACAATTGAAGATTCGTCGTCAATAGTGTCAGACAATAGTGGCAGCGGTCCCCTGAAGTGTAAATTCTGCGATAAACATTTCAAGTATAAGAAATCATTAGCAACTCATGAGATGAAACATTTTGAACTTGAAAAAACTGAGCAAAATCAAATCCAAGAAGGGACAATAAATGAAGAAACAGAAGCGGAAGGGAACCCATCCAGCCTGTTGAACGAATCGTACCGTGAGGAGGACGAGGAGTCGAGCCAGGAGGAGGGCGACGACAAGACTTGCGACATCTGCGAGAAGCAGTTCTCGTACCGGCGGCTCCTAGTGCACCACAAGCGCACCAAGCACAACATGAGCTCCGGCACCAAGCGCGCCAGCATCGTGCTCAAGAACTGCCTTGTGCGCTGCCTCATCTGCGACCTCGAAATGAGTGTCGGCGCGATCAACGATCACAACAAACAGCATATCCAACAGAACATGAAACCGCGCAACCTCTACACGTGTACCGACTGCGGCGACAAGTTCAAGAGTTGCAACGCTCTAGCCAACCACATCAAGCTGGTGCACAGGCTCAAGCGGCTGCCGCCCAAGCAGTTCGACGGTGCTGATCTGGCGGATTTTTGTGAGGTCGTTGTGACGAAAGCGGAACCACTGGACGAGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCGGAGGAACAGGAGGGCACGCCCTTGGTCAATCTCAGCGGATTTAGTTGTACTATCTGTGGAAAGACCATGCCCACTCTGATTTCCCTGAAACGTCATATGAATTGGCATTCGAATGTTGGAAATAGTTTAGAGAAAAAGCTAGAGTGCTTTGTTTGCAAAGagACGTTCCGGTTTCAATGCCATTACAAATTGCATATGCGCGAGCACTACCGTGACACTAATCTTGATCCCAAACTGCTCACGTGCACTATCTGCAATCGGAAAAGCAAACACTTGAGGGCTGCTCAAGCGCATATGAACTACCACAAACAAACCCGATTCAAGAACAAGGACTACCAGTGTTCCATCTGCAAGCGTGTTTTCCAATACCGAAAGGTCTATCTCTCTCACATGGCGATACACTACAAACGTGGTGAAAGTCAGAACACGATTGTTGGTGATTTATTACCTACCACTGCTGATAAAACTGTTTTTGACGGTACTCATACTTGCCTTCATTGTGGAAAAGTCTGTGACTCTGAGAACTCTCTGAAACATCATATGTCTTGGCACAAATCGAAGACTTTGCTATTTGGGGCCCGACACGAGTGTCCAATTTGCCACGTCAtgtttactaataaaaaaaggcAAGAGCTACATACGAGAACTCATTATGAAGATGAGAACGGTCCATTCAAGTGCACGATATGTGGCAAAGGCTACACCGACGAAGATTACTTCCGTCGCCATGTGAAAGGTCACAACTTCGATCATCAGTCTCACAAAGACCGAATAGCGAAGTTACGGAAGGACAAGGTGAAGTGTCCTATCTGCGTACGCTACTACCCTGACTGGGTCAAGCTGATCCGGCACCTGCGGCGCACGCACCCCGAGAGCAAGATGGTGAAGCCGGACCCCGATGCTCCCGCAGCTCGCGTATTCACGTGCAAGCTGTGCGCCAAGGCCTTCCGCGATGAGCGCCGTCTGCGCCACCACGAGGACTCGCATCTGCGCAAACCCGAGTTCTTCAAGTGCAAGTTCTGCGGAAAGAAGACAATATCACTCAAGAATCATAACCTACACATCAAAGGACATCTCACTTCCAAACATTTCGACAACCCTCTCAAATGCACTCAGTGTGAGGAGACGTTCATCAAGGGATATGATTTGCATCACCATTTGCGAGATGTGCATAACATTAATGAAACATGGATTGCAGAACGCAAGGAACAAACTCTAAATGGGCCTTTAAAAGATTTGCAATGCTCAATTTGTCTTAAAATACTTGCAAGCAAGGGCAACTATGAGAGGCACTTGGATTACCACAATTCACTGAGGTGCAACTACTGCTATGACTATTTTAGTTCACTGAGGTTCCTGGAAGGACATCTGACTTTCAGTTGCGATAAAAAGAAGTTAATTGGTGATACTGAAATATACGCGAGGAAGATTAAATGTAATATTTGTTACAAACCTTTCCATTTACAAGTGAAATTGGATTGCCATCTGCGCACGCAACATAATATAAAAGTGTCTAAAGAAGCTTCAAAGAGTAAAAAAGATCTTGTATGTGATTATTGCTTTAGAGTTTTCGAAAACCTCGATGCTCTTACCGGGCATAAAGTGTATCATCGTACCGTCGGTTATTACGGATGTATATATTGTAAGAGGAAATTCAACACATTGACTCTCTTCAGGAAGCACAAGAACCACCACTTTTCTCAGTTAAACGTGGATAATCCAACTAAGTGCGAACATTGCGATGAGACTTTTGTCGCGTTCCGGGAAATGATATACCACATGAGGGACGTACACGGGGACAACAAGGAGTGGCTTGTAATGCCAAAGGAGTCGATCGAGGAGACTTGCCCCGTGTGCAACAAGACGTTCTTCAACCTGCACCGACATCTAGACTACCACGAGGAGAACCGCTGCAAGAAATGCGGCGAGTACTTCTTCTCTCGCACCGACCTCGACAATCACCTGTGCGCCATCGAGAGCGACGACGAGGCGGGCCACGACGAGCGCGACGTACGCCCCAAGTACGAAGAGTGCCGCTTCTGCTTTAAGCCCATCACCACGAAGAGTTCCAAGGCAAAGCACGAACACATACATAAAGGCTCGGGATCTATCTCTTGCAGATTCTGTTCGCACAAATTTAAAACAATGGACGCATTCAACATTCATGCATTTTCCCATCGAAACCGCAAGTATAGAAAAAATCCATTAAAGTGTCGGAAGTGCGGCGAAAAATTTATTCAATACGGGCCTTTCATTAAGCACATGAGAGGAGTGcataattttgttcaaaaaatgCACTATCGAGCTACCGTGAAGGCGGAGCCTTGCGTGGTGTGCGGGGACGAGTTCCCCAACCTGCACAACCACTACCGAGCTCATCTGCAGAACCAGTGCTCGTCGTGTCTGAAGTACTTCACGTCGGCCAAAGTGTTCGCCGAGCACGAGTGCGACAAGGAGGACTCCGACCCCACCAAGGTATTCACGTGCGACGAGAACTTGCCCTTGTTGATCAACACGTATGTTCCGAAGGATGAACAGGACGAACAAAAGTATTACGGCTACGGAGatgaggaggaggaggaggtgGACAGCGGCGTACGGCTTCAGGGCCACATAATAGATGAGGAAAGCCAGAACTCCATCGAGAACGATGACTTCCAACTGCAATGTCCTATCATATCGGATGTGCTGTCGCTGTGCCAGAAGCAGGAGGCGGACGagcgcgcgcccgcgcccgcggtAGATCCCGAGATCGAGGTCATCGACctctccgacgacgaggtgggcCTAGTGGACGGTGACAACTGTCCCACCATCACCATTGACGATTAA
Protein Sequence: MLRQEARGGSSSTPVPPKRTSSDSVSSTHTEATNQTKPSHASEVDSAIRNTRKRSHESIEIASASSKSNEFRPTNSKRIEELKSSNKKPRLSNYYVDSDYEDNSASQFSAETDSDEPLLRDEFKCKVCERQFPSAKSLGVHSRSHSGKTNKAKETLTEDVLVTIPKKNVQDATDVEEKISCEFCGKSFKLKIMLKRHQETCGKSPQKTPPKPLQKELLVSLEPIDGIHANRIKCTMCTTTFKTIENLQKHMRVVHAAVLPAVKTEPKANNGKVSVPCIYCKKPFDDYYVHSEHFSKCPESTNSSTFSCPICKKVTTRKAAYFRHIKDVHFEPRMWSLKPETPEQGPAAALFECRMCSKRLPTEQLLITHLAAHVSNIEATDGDESRPSTIEDSSSIVSDNSGSGPLKCKFCDKHFKYKKSLATHEMKHFELEKTEQNQIQEGTINEETEAEGNPSSLLNESYREEDEESSQEEGDDKTCDICEKQFSYRRLLVHHKRTKHNMSSGTKRASIVLKNCLVRCLICDLEMSVGAINDHNKQHIQQNMKPRNLYTCTDCGDKFKSCNALANHIKLVHRLKRLPPKQFDGADLADFCEVVVTKAEPLDEIQSHNGFGEVPEEQEGTPLVNLSGFSCTICGKTMPTLISLKRHMNWHSNVGNSLEKKLECFVCKETFRFQCHYKLHMREHYRDTNLDPKLLTCTICNRKSKHLRAAQAHMNYHKQTRFKNKDYQCSICKRVFQYRKVYLSHMAIHYKRGESQNTIVGDLLPTTADKTVFDGTHTCLHCGKVCDSENSLKHHMSWHKSKTLLFGARHECPICHVMFTNKKRQELHTRTHYEDENGPFKCTICGKGYTDEDYFRRHVKGHNFDHQSHKDRIAKLRKDKVKCPICVRYYPDWVKLIRHLRRTHPESKMVKPDPDAPAARVFTCKLCAKAFRDERRLRHHEDSHLRKPEFFKCKFCGKKTISLKNHNLHIKGHLTSKHFDNPLKCTQCEETFIKGYDLHHHLRDVHNINETWIAERKEQTLNGPLKDLQCSICLKILASKGNYERHLDYHNSLRCNYCYDYFSSLRFLEGHLTFSCDKKKLIGDTEIYARKIKCNICYKPFHLQVKLDCHLRTQHNIKVSKEASKSKKDLVCDYCFRVFENLDALTGHKVYHRTVGYYGCIYCKRKFNTLTLFRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDNKEWLVMPKESIEETCPVCNKTFFNLHRHLDYHEENRCKKCGEYFFSRTDLDNHLCAIESDDEAGHDERDVRPKYEECRFCFKPITTKSSKAKHEHIHKGSGSISCRFCSHKFKTMDAFNIHAFSHRNRKYRKNPLKCRKCGEKFIQYGPFIKHMRGVHNFVQKMHYRATVKAEPCVVCGDEFPNLHNHYRAHLQNQCSSCLKYFTSAKVFAEHECDKEDSDPTKVFTCDENLPLLINTYVPKDEQDEQKYYGYGDEEEEEVDSGVRLQGHIIDEESQNSIENDDFQLQCPIISDVLSLCQKQEADERAPAPAVDPEIEVIDLSDDEVGLVDGDNCPTITIDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00412737;
90% Identity: iTF_00654535; iTF_00657487; iTF_00656368; iTF_00659637; iTF_00289887;
80% Identity: -