Basic Information

Insect: Cenopis cana
Gene Symbol: -
Assembly: GCA_951800055.1
Location: OX637471.1:20896421-20911989[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.056 4.3 9.1 0.2 1 21 199 219 199 220 0.95

2 27 0.00011 0.0087 17.6 0.2 2 22 255 275 254 275 0.93

3 27 4.4e-05 0.0034 18.9 2.9 2 23 308 330 307 330 0.97

4 27 7.1e-05 0.0054 18.2 0.5 1 23 382 405 382 405 0.95

5 27 0.094 7.2 8.4 0.1 1 23 426 448 426 448 0.96

6 27 0.0022 0.17 13.5 5.3 2 23 482 503 481 503 0.97

7 27 0.00082 0.063 14.9 1.9 2 23 556 578 556 578 0.97

8 27 0.0013 0.096 14.3 1.1 1 23 628 651 628 651 0.97

9 27 0.0021 0.16 13.6 0.2 1 23 707 729 707 729 0.97

10 27 0.024 1.8 10.3 6.1 2 23 741 762 740 762 0.96

11 27 0.058 4.4 9.1 1.8 2 23 774 795 773 795 0.96

12 27 0.0052 0.4 12.3 1.0 1 23 805 827 805 827 0.98

13 27 0.0042 0.32 12.6 7.5 1 23 855 877 855 877 0.97

14 27 0.018 1.4 10.7 4.3 1 23 888 910 888 910 0.98

15 27 9.7e-05 0.0075 17.8 0.9 1 23 918 940 918 940 0.97

16 27 0.0009 0.07 14.7 0.1 2 23 960 982 959 982 0.97

17 27 0.02 1.5 10.5 2.4 1 23 1000 1022 1000 1022 0.96

18 27 0.33 26 6.7 3.7 1 23 1029 1051 1029 1051 0.96

19 27 0.012 0.9 11.2 1.1 2 23 1062 1084 1061 1084 0.95

20 27 0.005 0.39 12.4 0.3 1 23 1106 1128 1106 1128 0.97

21 27 0.032 2.4 9.9 0.1 2 23 1209 1230 1208 1230 0.92

22 27 2.2 1.7e+02 4.1 4.5 5 23 1240 1258 1237 1258 0.94

23 27 0.022 1.7 10.4 0.8 2 23 1269 1291 1268 1291 0.95

24 27 0.53 41 6.0 2.8 2 23 1308 1326 1308 1326 0.89

25 27 0.041 3.1 9.5 1.4 2 21 1330 1349 1330 1350 0.94

26 27 1.7 1.3e+02 4.4 2.6 2 23 1398 1419 1397 1419 0.93

27 27 0.0012 0.094 14.3 0.3 2 23 1430 1452 1429 1452 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.056	4.3	9.1	0.2	1	21	199	219	199	220	0.95
2	27	0.00011	0.0087	17.6	0.2	2	22	255	275	254	275	0.93
3	27	4.4e-05	0.0034	18.9	2.9	2	23	308	330	307	330	0.97
4	27	7.1e-05	0.0054	18.2	0.5	1	23	382	405	382	405	0.95
5	27	0.094	7.2	8.4	0.1	1	23	426	448	426	448	0.96
6	27	0.0022	0.17	13.5	5.3	2	23	482	503	481	503	0.97
7	27	0.00082	0.063	14.9	1.9	2	23	556	578	556	578	0.97
8	27	0.0013	0.096	14.3	1.1	1	23	628	651	628	651	0.97
9	27	0.0021	0.16	13.6	0.2	1	23	707	729	707	729	0.97
10	27	0.024	1.8	10.3	6.1	2	23	741	762	740	762	0.96
11	27	0.058	4.4	9.1	1.8	2	23	774	795	773	795	0.96
12	27	0.0052	0.4	12.3	1.0	1	23	805	827	805	827	0.98
13	27	0.0042	0.32	12.6	7.5	1	23	855	877	855	877	0.97
14	27	0.018	1.4	10.7	4.3	1	23	888	910	888	910	0.98
15	27	9.7e-05	0.0075	17.8	0.9	1	23	918	940	918	940	0.97
16	27	0.0009	0.07	14.7	0.1	2	23	960	982	959	982	0.97
17	27	0.02	1.5	10.5	2.4	1	23	1000	1022	1000	1022	0.96
18	27	0.33	26	6.7	3.7	1	23	1029	1051	1029	1051	0.96
19	27	0.012	0.9	11.2	1.1	2	23	1062	1084	1061	1084	0.95
20	27	0.005	0.39	12.4	0.3	1	23	1106	1128	1106	1128	0.97
21	27	0.032	2.4	9.9	0.1	2	23	1209	1230	1208	1230	0.92
22	27	2.2	1.7e+02	4.1	4.5	5	23	1240	1258	1237	1258	0.94
23	27	0.022	1.7	10.4	0.8	2	23	1269	1291	1268	1291	0.95
24	27	0.53	41	6.0	2.8	2	23	1308	1326	1308	1326	0.89
25	27	0.041	3.1	9.5	1.4	2	21	1330	1349	1330	1350	0.94
26	27	1.7	1.3e+02	4.4	2.6	2	23	1398	1419	1397	1419	0.93
27	27	0.0012	0.094	14.3	0.3	2	23	1430	1452	1429	1452	0.95

Sequence Information

Coding Sequence: ATGGCTCTCAAGCTGGGAAAATGTAGACTCTGTCTCAAACTTGGCGACTTCTACTCCATCTTCACTGTGGATAACAGTGTACAATTGGCGGACATGGTGATGGAGTGCGCCCGGATCAAGATATTTGAAGGAGATGGTCTTCCTGACAAAGTATGTGCCGAGTGTATCCAGAAACTCAGTAGCgcatatatttttaaacaacaATGTGAAAGAGCGGATCAGGAGTTACGGCGGAATTTTGTGCCACCTCCAGGGTCGAGCTCCACCCCGGTCCCGCCGAACAGGACCAGTAGTGATTCCGTTTCGTCCACGCACACCGAGGCTACCAGCCAAACCAAACCGTCTCAGGCCTCCGAGGTGGACTCCGCCAAAAGGAACAGTCGCAAGCGTAGTCACGAAAGCCTGGAAATCGCTTCGGCCAGCAGCAAATCAAACGAATTCCGGCCCACTAGTTCAAAGCGAATTGAGGAACTGAAAAGCAGTCACAAAAAGCCTAGGCTTAGCAATTATTATGTGGATTCAGATTACGAAGATAATAGCGCTTCTCAGTTCTCTGCTGAAACAGATTCTGATGAACCCCTGCTGAGAGATGAATACAAGTGTAAAGTTTGCGAACGGCAGTTCCCGTCGGTGAAGGGATTAGGGGCGCACACACGATTCTGTGGCAAAACGAACAAAGCGAAAGAAACTCTCACTGAAAATGTAGTTGTAACTATTCCAAAGAAAACTGTGCAGGACGCAACTGacgtagaagacaaaattagcTGCGAGATATGCGGAAAAAGCTTCAAATTGAAGATAATGCTGAAGCGACACCAGGAGACTTGCGGCAAGTCTCCACAAAAGTCACCCTCCAAACCACTCCAAAAGGAGTTACTCATATCGCTGGAGCCAATAGACGGTGTTCATGCTAATCGAATAAAATGCACTATGTGCACCACTACGttcaaaaacatcgaaaatcTGGAAAAGCATATGAGAGTGTGCCACGCGGCTGTGCTTCCGAAAGTTATTAAATCGGAGCCGAAAGCGAACAACGGCAAGGTGTCCGTACCCTGTATTTACTGCAAAAAACCTTTTGACGACTATTATGTTCATAGTGAACATTTCAGTAAATGCCCTGAAAGTACTAACGCGAGCACATACCCGTGCCCGGTTTGCAAGAAAGTGACAACGCGGAAGGCGTCATATTTCCGGCACATCAAGGACGTGCACTTCGAGCCGCGCATGTGGTCGCTGAAGCCGGAGGCGCCGGAGCAGGGCTCGGCGCAGCTGTTCGAGTGCCGCATGTGCAGCAAGCGGCTGCCCACCGAGCAGCTGCTCATCACGCACCTGGCCGCGCACGTGTCCAACATCGAGGCCACTGACGGCGACGACTCTAGGGCTAGCACAATCGAAGATTCGTCATCAATAGTGTCGGACAATAGTGGCAACGGGCCGCTGAAGTGTAAATTCTgcgataaacatttcaaatataaaaaatcatTAGCAACTCATGAAATGAAACATTTCGAACTTGAAAAAGCTGAGCAGAATGAACACCAGCAAAGTTCAGTACACGAAGAAATGGAAGCGGAGGGCAACGCGTCGGGCAGCCTGTTGAACGAGTCGTACcgcgaggaggaggaggagcagGAGTCGAGCCAGGAGGAGGGCGACGACAACACTTGCGACATCTGCGAGAAGCAGTTCTCGTACCGGCGGCTGCTCGTGCAGCACAAGCGCACCAAGCACAACATGAGCTCCGGCACCAAGCGCGCCAACGTCGTGCTCAAGAACTGCCTAGTGCGCTGCCTCATCTGCGACCTCGAGATGAGCGTCGGCGCCATCAACGATCACAACAAACAACACATCCAACAGAACATGAAGCCGCGCAACCTCTACACCTGCACCGACTGCGGCGACAAGTTCAAGAGCTGCAACGCTCTGGCCAACCACATCAAGCTCGTGCACAGGCTCAAGCAGCAGCCGCCCAAGCAGTTCGAGGGTGCCGATCTGGCGGATTTTTGTGAGGTCGTTGTGACGAAAGCGGAACCCCTGGACGAGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCGGAGGAGCAAGAGGGCTCGCCCTTGGTCAATCTCAGCGGATTTAATTGTACTATCTGTGGAAAGACCATGCCCACTCTGATTTCCCTGAAACGTCATGTCAACTGGCATTCGAATGTTGGAAATAATCTAGAAAAAAAGCTAGAGTGCTTTGTTTGCAAAGagACGTTCCGGTTTCAATGCCATTACAAATTGCATATGCGCGAGCACTACCGTGACACTAATCTTGACCCCAAACTGCTCACGTGCACGATCTGCAATCGGAAAAGCAAACACTTGAGAGCTGCTCAAGCACATATGAACTACCATAAACAAACCCGATTTAAGAACAAGGACTATCAGTGTTCCATATGCAAACGTGTTTTCCAATACCGAAAGGTGTATCTCTCTCACATGGCGATACATTACAAACGTGGTGAAAGTCAAAACACGATTGTAGGTGATTTATTACCTACAACTGCCGATAAAACTGTGTTTGACGGTAGCCATACTTGCAGTCATTGCGGAAAAGTCTGTGACTCTGAGAACTCTTTGAAACACCATATGTCTTGGCACAAATCGAAGACTTTGCTATTTGGCGCCCGACACGAGTGTCCAATTTGCCACGTCATGTTCACTAATAAAAAGAGGCAAGAGCTACATACGAGAACTCATTACGAAGATGAGAACGGTCCATTCAAGTGTACGATATGTGGCAAAGGCTACACCGACGAAGAGTTCTTCCGTCGGCACGTGAAAGGTCACAACTTCGATCACCAGTCTCACAAAGACCGAATAGCGAAGTTGCGGAAGGACAAGGTGAAGTGCCCCATCTGCGTGCGCTACTACCCCGACTGGGTGAAGCTGATCCGGCACCTGCGGCGCACGCACCCCGAGAGCAAGATGGTGAAAGCGGACCccgacgcgcccgccgcgcgcGTCTTCACGTGCAAGCTGTGCGCCAAGGCCTTCCGCGACGAGCGCCGGTTGCGCCACCACGAGGACTCGCATCTGCGCAAGCCCGAGTTCTTCAAGTGCAAGTTCTGTGGGAAGAAAACTATATCACTCAAAAATCATAACCTGCACATTAAAGGACATCTCACTTCCAAACATATTGACAACCCCCTCAAATGCACTCAGTGCGATGAGACGTTTATCAAAGGATATGACTTGCATTACCATTTGCGAGATGTGCATAACATTAATGAAACATGGATTGCAGAGCGCAAAGAACAAACTCTAAATGGGCCTTTGAAAGAGTTTCAATGTTCAATTTGTCTTAAAATACTTGCAAGCAAAGGCAACTATGAGAGGCACTTGGATTACCACAATTCGCTAAGGTGCAACTACTGCTACGACTATTTTAGTTCACTGAGGTTCCTGGAAGGACATCTGACTTTCAGTTGTGATAAAAAGAAGTTAGTTGGTGATACTGAGATATATCCGAGGAAGATTAAATGTAATGTTTGCTACAAACCATTCCATTTACAAGTGAAATTGGATTGCCATTTGCGCACGCAACATAATATAAAAGTGTCTAAAGAAGCTTCAAAGAGCAAAAAAGACCTTGTATGTGATTATTGTTTTAGAGTATTCGAAAACCTCGATGCTCTTACTGGGCATAAAGTGTACCATCGTACGGTCGGTTATTACGGCTGTATATATTGCAAGAGGAAATTCAACACTTTGACTCTCTACAGGAAACATAAGAACCATCACTTTGCTCAGTTGAACGTGGATAACCCTACCAAGTGCGAACACTGCGATGAGACTTTTGTCGCTTTCCGGGAAATGATATACCACATGAGGGACGTGCACGGGGACAACAAGGAGTGGCTCATAATGCCGAAGGAGTCGATCGAAGAGACGTGCCCCGTGTGCAACAAGACGTTCTTCAACCTGCACCGGCACCTGGACTACCACGAGGAGAACCGCTGCAAGAAGTGCGGCGAGTACTTCTACTCGCGCACCGACCTCGACAACCACCTGTGCGCCATCGAGAGCGAGGACGAGGCGGGCAACGACGAGCGCGACGTGCGCCCCAAGTACGAGGAGTGCCGCTTCTGCTTCAAACCCATCACCAGGAAAAGCTCCAGGGCCAAGCACGACCACATACATAAGGGCTCCGGATCTATCTCCTGTAGATTCTGTTCGCACAAATTTAAAACAATGGACGCATTCAACATTCATGCGTTTTCCCATCGCAACCGCAAGTACAGAAAGAATCCATTAAAGTGCCGGAAGTGCGGCGAGAAATTTATTCAATACGGGCCCTTCATAAAGCACATGAGAGGCGTGCATAATTTCGTTCAAAAAATGCACTATCGAGCGACCGTGAAAGCGGAGCCTTGCTTGGTATGCGGTGACGAGTTCCCCAACCTTCACAACCACTACCGCGCGCATCTACAGAACCAGTGCACGTCGTGTCTCAAGTACTTCACCTCGGCCAAGGTGTACGCCGAGCACGAGTGCGGCAAGGAGGACTCCGACCCCACCAAGGTGTTCACGTGCGACGCCGACTTGCCGTTGTTGATCAACACGTATGTTCCGAAAGACGAACTGGACGAACAGAAGTATTACCGCGACGGAGAGGAGGAGGAGGTGAGCGGGCGCGTGCGGCTCCAGGGCCACATCATAGACGAGGAGAGCCAGAACtccaatgacaatgacattgacgaCTTCCAACTGCAGTGTCCCATTATATCGGACGTGCTGTCGCTCTGCCAGAAGCAGGAGGTGGTGgagcgcgcgcccgcgcccgcacccgcgcccgcgcccgagcACGAGATCATCGACCTCTCCGACGATGAGGTGGGCATCGTGGACAGTGACAACTGTCCCACCATCACCATTGATGATTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSVQLADMVMECARIKIFEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNFVPPPGSSSTPVPPNRTSSDSVSSTHTEATSQTKPSQASEVDSAKRNSRKRSHESLEIASASSKSNEFRPTSSKRIEELKSSHKKPRLSNYYVDSDYEDNSASQFSAETDSDEPLLRDEYKCKVCERQFPSVKGLGAHTRFCGKTNKAKETLTENVVVTIPKKTVQDATDVEDKISCEICGKSFKLKIMLKRHQETCGKSPQKSPSKPLQKELLISLEPIDGVHANRIKCTMCTTTFKNIENLEKHMRVCHAAVLPKVIKSEPKANNGKVSVPCIYCKKPFDDYYVHSEHFSKCPESTNASTYPCPVCKKVTTRKASYFRHIKDVHFEPRMWSLKPEAPEQGSAQLFECRMCSKRLPTEQLLITHLAAHVSNIEATDGDDSRASTIEDSSSIVSDNSGNGPLKCKFCDKHFKYKKSLATHEMKHFELEKAEQNEHQQSSVHEEMEAEGNASGSLLNESYREEEEEQESSQEEGDDNTCDICEKQFSYRRLLVQHKRTKHNMSSGTKRANVVLKNCLVRCLICDLEMSVGAINDHNKQHIQQNMKPRNLYTCTDCGDKFKSCNALANHIKLVHRLKQQPPKQFEGADLADFCEVVVTKAEPLDEIQSHNGFGEVPEEQEGSPLVNLSGFNCTICGKTMPTLISLKRHVNWHSNVGNNLEKKLECFVCKETFRFQCHYKLHMREHYRDTNLDPKLLTCTICNRKSKHLRAAQAHMNYHKQTRFKNKDYQCSICKRVFQYRKVYLSHMAIHYKRGESQNTIVGDLLPTTADKTVFDGSHTCSHCGKVCDSENSLKHHMSWHKSKTLLFGARHECPICHVMFTNKKRQELHTRTHYEDENGPFKCTICGKGYTDEEFFRRHVKGHNFDHQSHKDRIAKLRKDKVKCPICVRYYPDWVKLIRHLRRTHPESKMVKADPDAPAARVFTCKLCAKAFRDERRLRHHEDSHLRKPEFFKCKFCGKKTISLKNHNLHIKGHLTSKHIDNPLKCTQCDETFIKGYDLHYHLRDVHNINETWIAERKEQTLNGPLKEFQCSICLKILASKGNYERHLDYHNSLRCNYCYDYFSSLRFLEGHLTFSCDKKKLVGDTEIYPRKIKCNVCYKPFHLQVKLDCHLRTQHNIKVSKEASKSKKDLVCDYCFRVFENLDALTGHKVYHRTVGYYGCIYCKRKFNTLTLYRKHKNHHFAQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDNKEWLIMPKESIEETCPVCNKTFFNLHRHLDYHEENRCKKCGEYFYSRTDLDNHLCAIESEDEAGNDERDVRPKYEECRFCFKPITRKSSRAKHDHIHKGSGSISCRFCSHKFKTMDAFNIHAFSHRNRKYRKNPLKCRKCGEKFIQYGPFIKHMRGVHNFVQKMHYRATVKAEPCLVCGDEFPNLHNHYRAHLQNQCTSCLKYFTSAKVYAEHECGKEDSDPTKVFTCDADLPLLINTYVPKDELDEQKYYRDGEEEEVSGRVRLQGHIIDEESQNSNDNDIDDFQLQCPIISDVLSLCQKQEVVERAPAPAPAPAPEHEIIDLSDDEVGIVDSDNCPTITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00412737;
90% Identity: iTF_01072797;
80% Identity: -