Basic Information

Insect: Epinotia nisella
Gene Symbol: -
Assembly: GCA_932294385.1
Location: CAKOAM010000035.1:2414550-2419431[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 1.6e-05 0.0011 19.8 0.2 1 23 120 142 120 142 0.98

2 28 0.00022 0.015 16.2 0.3 2 22 177 197 176 197 0.93

3 28 2.7e-06 0.00018 22.2 0.5 2 23 230 252 229 252 0.97

4 28 0.00013 0.0088 16.9 0.4 1 23 303 326 303 326 0.95

5 28 0.13 8.7 7.5 0.1 1 23 348 370 348 370 0.96

6 28 0.0015 0.099 13.6 5.3 2 23 404 425 403 425 0.97

7 28 0.0015 0.1 13.6 3.7 2 23 474 496 474 496 0.97

8 28 0.00024 0.016 16.1 1.6 1 23 546 569 546 569 0.97

9 28 0.0045 0.31 12.1 0.2 1 23 625 647 625 647 0.97

10 28 0.015 1.1 10.4 6.1 2 23 659 680 658 680 0.96

11 28 0.038 2.6 9.1 1.8 2 23 692 713 691 713 0.96

12 28 0.0035 0.24 12.4 1.0 1 23 723 745 723 745 0.98

13 28 0.008 0.54 11.3 7.2 1 23 773 795 773 795 0.97

14 28 0.012 0.8 10.8 4.3 1 23 806 828 806 828 0.98

15 28 1.7e-05 0.0012 19.7 0.8 1 23 836 858 836 858 0.97

16 28 0.0006 0.041 14.8 0.1 2 23 878 900 877 900 0.97

17 28 0.015 1 10.4 1.7 1 23 918 940 918 940 0.95

18 28 0.22 15 6.7 3.7 1 23 947 969 947 969 0.96

19 28 0.027 1.8 9.6 1.1 2 23 980 1002 979 1002 0.95

20 28 0.0033 0.23 12.5 0.3 1 23 1024 1046 1024 1046 0.97

21 28 3.8 2.6e+02 2.9 3.9 2 23 1089 1111 1088 1111 0.94

22 28 0.021 1.4 10.0 0.1 2 23 1127 1148 1126 1148 0.92

23 28 1.4 97 4.2 4.5 5 23 1158 1176 1155 1176 0.94

24 28 0.051 3.5 8.7 0.8 2 23 1187 1209 1186 1209 0.95

25 28 0.84 57 4.9 3.2 3 23 1227 1244 1226 1244 0.88

26 28 0.23 16 6.7 1.5 2 21 1248 1267 1248 1268 0.94

27 28 1.1 77 4.5 2.6 2 23 1316 1337 1315 1337 0.93

28 28 0.00081 0.055 14.4 0.3 2 23 1348 1370 1347 1370 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	1.6e-05	0.0011	19.8	0.2	1	23	120	142	120	142	0.98
2	28	0.00022	0.015	16.2	0.3	2	22	177	197	176	197	0.93
3	28	2.7e-06	0.00018	22.2	0.5	2	23	230	252	229	252	0.97
4	28	0.00013	0.0088	16.9	0.4	1	23	303	326	303	326	0.95
5	28	0.13	8.7	7.5	0.1	1	23	348	370	348	370	0.96
6	28	0.0015	0.099	13.6	5.3	2	23	404	425	403	425	0.97
7	28	0.0015	0.1	13.6	3.7	2	23	474	496	474	496	0.97
8	28	0.00024	0.016	16.1	1.6	1	23	546	569	546	569	0.97
9	28	0.0045	0.31	12.1	0.2	1	23	625	647	625	647	0.97
10	28	0.015	1.1	10.4	6.1	2	23	659	680	658	680	0.96
11	28	0.038	2.6	9.1	1.8	2	23	692	713	691	713	0.96
12	28	0.0035	0.24	12.4	1.0	1	23	723	745	723	745	0.98
13	28	0.008	0.54	11.3	7.2	1	23	773	795	773	795	0.97
14	28	0.012	0.8	10.8	4.3	1	23	806	828	806	828	0.98
15	28	1.7e-05	0.0012	19.7	0.8	1	23	836	858	836	858	0.97
16	28	0.0006	0.041	14.8	0.1	2	23	878	900	877	900	0.97
17	28	0.015	1	10.4	1.7	1	23	918	940	918	940	0.95
18	28	0.22	15	6.7	3.7	1	23	947	969	947	969	0.96
19	28	0.027	1.8	9.6	1.1	2	23	980	1002	979	1002	0.95
20	28	0.0033	0.23	12.5	0.3	1	23	1024	1046	1024	1046	0.97
21	28	3.8	2.6e+02	2.9	3.9	2	23	1089	1111	1088	1111	0.94
22	28	0.021	1.4	10.0	0.1	2	23	1127	1148	1126	1148	0.92
23	28	1.4	97	4.2	4.5	5	23	1158	1176	1155	1176	0.94
24	28	0.051	3.5	8.7	0.8	2	23	1187	1209	1186	1209	0.95
25	28	0.84	57	4.9	3.2	3	23	1227	1244	1226	1244	0.88
26	28	0.23	16	6.7	1.5	2	21	1248	1267	1248	1268	0.94
27	28	1.1	77	4.5	2.6	2	23	1316	1337	1315	1337	0.93
28	28	0.00081	0.055	14.4	0.3	2	23	1348	1370	1347	1370	0.95

Sequence Information

Coding Sequence: ATGCTTACAGGGTCCAGCTCCACCCCAGTTCCACCAAACAGGACCAGTAGCGATTCCGTTTCTTCCATTCACACCGAGGCTACCAACCAAACAAAACCATCTCAGGCCTCCGAGGTGGAATCTACAAAAAGGAACAGTCGCAAGCGTAGTCACGAAAGCCTGGAAATTGCATCTGCCAGTAGCAAATCAAACGAGTTCCGGCCTACTAATTCAAAACGAATTGAAGAACTGAAAAGTAGCCACAAGAAGCCTAGGCTGACATCTAGCAATTATTATATGGATTCAGATTACGAAGATAATAGCGCTTCTCAATTCTCGTGTGAAACAGATTCCGATGAACCCCTACTAAGAGATGAGTTCAAGTGTAAAGTTTGTGGACGCCAGTTCGCGTCGGCGAAGAGCTTGGCGGCACACTCCCGAATACATTCTGGCAAAACGAACAAGGCGAAAGATACCCTCACTGAAAATGTACTTGTAACTATTCCAAAGAAAAATGTACAGGACGCAACTGACGTAGAAGACCAAATTAGCTGCGAGTTATGCGGAAAAAGTTTCAAATTGAAAATAATGCTGAAGCGTCACCAGGAGACCTGCGGCAAGTCTCCACAAAAGACACCCCCCAAACCGCTCCAGAAGGAGTTACTCATATCGCTGGAGCCCATAGACGGTATTCATGCGAATAAAATCAAATGTACCATTTGCACGACTACCTTCAAAACCATCGAGAATCTTGAAAAGCATATGAGAGTGGTCCATGCGGCTGCCCTTCCGAAAGTTAAAACGGAGCCGAAAACGAACAACGGCAAGGTCTCCGTTCCCTGTATTTACTGTAGAAAACCTTTCGATGACTATTATGTTCACAGTGAACATTTCAGTAAATGCCCTGAAAGTACTAACGCGACCACATTCCCCTGTCCAGTTTGCACGAAAGTGACAACACGGAAGGCCTCATATTTCAAACACATCAAGGACGTGCACTTCGAGCCGCGGATGTGGTCGCTGAAGCCGGAGACACCGGAGCAGGGCCCGGCGGCGGAGCAGTTCGAGTGCCGCATGTGCTACAAGCGGCTGCCCACGGAGCAGCTGCTCATCACGCACCTGGCCGCGCACGTCTCCAACATCGAGGGCACAGACGGCGACGAGTCCAGGCCAAGCACGATTGAAGATTCCGCGTCAATAATGTCGGACAATAGTGGAAACGGTCCTCTGAAGTGTAAATTTTGCGATAAACATTTCAAATATAAAAAATCGTTAGCAACCCATGAGATGAAACATTTCGAACTGGAAAAAACTGAGCAAAAGCAAGAAAAGGCAGCCAACGAAGAAACAGAAGCGGAAGGGAACGCGTCGAGCAGCCTGTTGAACGAGTCGTACCGCGAGGATGAGGAGGAGTCGAGTCAGGAGGAGGGCGACGACAACACTTGCGACATCTGCGAGAAGCAGTTCTCGTACCGGCGGCTGCTCGTGCACCACAAGCGCACCAAGCACAACATGAGCTCTGGGACCAAGCGCGCCAGCGTCGTGCTCAAGAACTGTCTCGCGCGCTGTCTCATCTGTGACCTCGAGATGAGCGTCGGCGATATCAACGAACACAACAAGCAGCACCTCCAGCAGAACATGAAACCGCGCAATCTCTATACGTGCACTGATTGCAGTGAGAAGTTCAAGAGCTGCAACGCTCTAGCCAACCACATCAAGCTGGTGCACAGGCTCAAGCGGCTGCCGCCCAAGCAGTTTGACGGTGCTGATCTGGCGGATTTTTGTGAGGTCGTTGTGACGAAAGCGGAACCCCTGGACGAGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCGGAGGAGCAGGAGGGCTCGCCCTTGGTCAATCTCAGTGGATTTAATTGTACTATTTGTGGAAAGAACATGCCCACTCTGATTTCCCTGAAACGGCATGTCAATTGGCATTCAAATGTTGGAAATAATTTAGAAAAAAAGTTAGAGTGCTTCGTTTGCAAAGAGACATTCCGGTTTCAATGTCATTACAAATTACATATGCGCGAGCACTACCGCGACACGAATCTTGATCCCAAACTGCTCACGTGCACCATCTGCAATCGGAAAAGCAAACACTTGAGGGCTGCTCAGGCTCATATGAACTACCACAAACAAACCCGATTCAAGAATAAGGACTATCAGTGCTCCATATGCAAGCGTGTTTTTCAATACCGAAAGGTCTATCTCTCTCACATGGCAATACACTACAAGCGTGGTGAAAGCCAGAATACGATCGTAGGGGACTTATTACCTACCACTGCTGATAAAACCGTTTTTGATGGTACTCATACTTGCCTTCATTGCGGAAAAGTCTGTGACTCGGAGAACTCTCTAAAACATCATATGTCTTGGCACAAATCAAAGACTTTACTGTTTGGCGCGCGACACGAGTGTCCCATTTGCCACGTCATGTTCACTAATAAAAAAAGGCAAGAGCTACACACGCGAACTCATTATGAAGACGAAAACGGTCCATTCAAGTGTACGATATGTGGCAAAGGCTACACCGACGAAGAATACTTTCGTCGGCATGTGAAAGGTCATAACTTCGATCACCAGTCTCACAAAGACCGTATAGCGAAGTTGCGAAAGGACAAAGTAAAGTGCCCTATCTGTGTGCGTTACTACCCCGACTGGGTGAAGCTGATCCGGCACCTGCGGCGCACGCACCCCGAGAGCAAGATGGTGAAGCAGGACCCCGACGCGCCCGCGCCGCGCGTGTTCGCGTGCAAGCTGTGCGCCAAGGTGTTCCGCGACGAGCGCCGCCTGCGCCACCACGAGGACTCGCACCTGCGCAAGCCCGAGTTCTTCAAGTGCAAGTTCTGCGGGAAGAAAACTATCTCGCTCAAAAACCATAACCTGCACATTAAAGGACATCTCACTTCTAAACACTTCGACAACCCCCTAAAATGCACTCAGTGTGAGGAGACGTTCATCAAGGGATATGACTTGCATTATCATCTGCGGGATGTGCACGACATTAATGAAACATGGATTGCAGAACGCAAAGAGCAAACGTTAAACGGGCCTTTGAAAGAGTTTCAATGCTCAATTTGCCTTAAAATACTTGCAAGTAAAGGCAACTATGAGAGGCACTTGGATTACCACAATTCGCTGAGGTGCAACTACTGCTACGACTATTTCAGTTCACTGAGGTTCCTGGAAGGACATCTGACTTTTAGTTGTGATAAAAAGAAGTTAGTTGGTGATACTGAGATATATGCGAGAAAAATTAAATGTAATATTTGCTACAAACCATTCCATTTACAAGTCAAATTGGATTGCCATTTGCGCACGCAACATAATATAAAAGTGTCTAAAGAAGCTTCAAAGAGCAAAAAAGACCTTGTATGTGATTATTGCTTTAGAGTATTCGAAAACCTTGATGCACTGACTGGGCACAAAGTGTATCACCGTACCGTTGGTTACTATGGGTGCATATATTGCAAGAGAAAATTCAACACTTTGACTCTCTACAGGAAACATAAGAACCACCACTTTGCTCAGTTGAACGTGGATAACCCTACAAAGTGCGAACACTGCGAGGAGACGTTCGTCGCGTTCCGGGAAATGATATACCACATGAGAGACGTGCACGGGGACGACAAGGAGTGGCTCGTGATGCCGAAGGAGTCGATCGAGGAGCCGTGCCCCGTGTGCCACAAGGTGTTCTTCAACCTGCACCGGCACCTGGACTACCACGAGGAGAACCGCTGCAGGAAGTGCGGCGAGTACTTCTTCTCGCGCACCGACCTCGACAACCACCTGTGCGCCATCGAGAGCGAGGACGAGGCGGGCAGCGACGAGCGCGACGTGCGCCCCAAGTACGAGGAGTGCCGCTTCTGCTTCAAGCCCATTACCAGAAAGAGCTCCAAAGCGAAACACGACCATATACATAAAGGCTCTGGATCTATCTCTTGTCGATTCTGTTCGCACAAATTTAAAACAATGGACGCATTCAATATACATGCATTTTCTCATCGCAACCGCAAATACAGAAAAAATCCATTAAAGTGTCGAAAGTGCGGCGAGAAATTTATTCAGTATGGGCCCTTCATAAAGCACATGAGAGGAGTGCACAATTTCGTTCAAAAAATGCACTACCGAGCGACCGTGAAGGCAGAGCCCTGCGCGGTGTGCGGGGACGAGTTCCCCAACCTGCACAACCACTACCGGGCGCATCTACAGAACCAGTGCCCCTCATGCCTCAAGTACTTCACCTCGGCCAAGGTGTTCGCCGAGCACGAGTGCGCCAAGGATGACTCCGACCCAACCAAGGTGTTCACCTGCGACGAGAACTTGCCCTGGTTGATCAACACCTATGTTCCCAAAGACGAACAGGACGAACAAAAGTATTACGGCTACGGAGATGAGGAGGAGGTAGACAGTGGCGTGCGGCTTCAGGGCCACATAATAGACGAGGAAAGCCAGAATTCGAATGAGAACGAGGACTTCCAACTGCATTGCCCTGTCATATCGGACGTGCTGTCGCTGTGCCAGAAGCAGGAGGCGGAAAGCGCGCCCGCGCCCGAGCACGAGGTCATCGACCTCTCCGACGACGACGTGGGCCTGGTGGACTCCGGCGCGAACTGTGTCACCATCACCATTGATGATTAA
Protein Sequence: MLTGSSSTPVPPNRTSSDSVSSIHTEATNQTKPSQASEVESTKRNSRKRSHESLEIASASSKSNEFRPTNSKRIEELKSSHKKPRLTSSNYYMDSDYEDNSASQFSCETDSDEPLLRDEFKCKVCGRQFASAKSLAAHSRIHSGKTNKAKDTLTENVLVTIPKKNVQDATDVEDQISCELCGKSFKLKIMLKRHQETCGKSPQKTPPKPLQKELLISLEPIDGIHANKIKCTICTTTFKTIENLEKHMRVVHAAALPKVKTEPKTNNGKVSVPCIYCRKPFDDYYVHSEHFSKCPESTNATTFPCPVCTKVTTRKASYFKHIKDVHFEPRMWSLKPETPEQGPAAEQFECRMCYKRLPTEQLLITHLAAHVSNIEGTDGDESRPSTIEDSASIMSDNSGNGPLKCKFCDKHFKYKKSLATHEMKHFELEKTEQKQEKAANEETEAEGNASSSLLNESYREDEEESSQEEGDDNTCDICEKQFSYRRLLVHHKRTKHNMSSGTKRASVVLKNCLARCLICDLEMSVGDINEHNKQHLQQNMKPRNLYTCTDCSEKFKSCNALANHIKLVHRLKRLPPKQFDGADLADFCEVVVTKAEPLDEIQSHNGFGEVPEEQEGSPLVNLSGFNCTICGKNMPTLISLKRHVNWHSNVGNNLEKKLECFVCKETFRFQCHYKLHMREHYRDTNLDPKLLTCTICNRKSKHLRAAQAHMNYHKQTRFKNKDYQCSICKRVFQYRKVYLSHMAIHYKRGESQNTIVGDLLPTTADKTVFDGTHTCLHCGKVCDSENSLKHHMSWHKSKTLLFGARHECPICHVMFTNKKRQELHTRTHYEDENGPFKCTICGKGYTDEEYFRRHVKGHNFDHQSHKDRIAKLRKDKVKCPICVRYYPDWVKLIRHLRRTHPESKMVKQDPDAPAPRVFACKLCAKVFRDERRLRHHEDSHLRKPEFFKCKFCGKKTISLKNHNLHIKGHLTSKHFDNPLKCTQCEETFIKGYDLHYHLRDVHDINETWIAERKEQTLNGPLKEFQCSICLKILASKGNYERHLDYHNSLRCNYCYDYFSSLRFLEGHLTFSCDKKKLVGDTEIYARKIKCNICYKPFHLQVKLDCHLRTQHNIKVSKEASKSKKDLVCDYCFRVFENLDALTGHKVYHRTVGYYGCIYCKRKFNTLTLYRKHKNHHFAQLNVDNPTKCEHCEETFVAFREMIYHMRDVHGDDKEWLVMPKESIEEPCPVCHKVFFNLHRHLDYHEENRCRKCGEYFFSRTDLDNHLCAIESEDEAGSDERDVRPKYEECRFCFKPITRKSSKAKHDHIHKGSGSISCRFCSHKFKTMDAFNIHAFSHRNRKYRKNPLKCRKCGEKFIQYGPFIKHMRGVHNFVQKMHYRATVKAEPCAVCGDEFPNLHNHYRAHLQNQCPSCLKYFTSAKVFAEHECAKDDSDPTKVFTCDENLPWLINTYVPKDEQDEQKYYGYGDEEEVDSGVRLQGHIIDEESQNSNENEDFQLHCPVISDVLSLCQKQEAESAPAPEHEVIDLSDDDVGLVDSGANCVTITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00412737;
90% Identity: iTF_01072797;
80% Identity: -