Basic Information

Insect: Epinotia brunnichana
Gene Symbol: -
Assembly: GCA_963854355.1
Location: OY977935.1:44479071-44486154[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 4.7e-05 0.0059 18.9 0.4 1 23 120 142 120 142 0.98

2 28 0.00036 0.045 16.2 0.3 2 22 177 197 176 197 0.93

3 28 4.3e-06 0.00055 22.2 0.5 2 23 230 252 229 252 0.97

4 28 0.0001 0.013 17.9 0.5 1 23 303 326 303 326 0.95

5 28 0.019 2.4 10.7 0.6 1 23 348 370 348 370 0.96

6 28 0.0023 0.3 13.6 5.3 2 23 404 425 403 425 0.97

7 28 0.0024 0.3 13.6 3.7 2 23 477 499 477 499 0.97

8 28 3.5e-05 0.0045 19.3 1.1 1 23 549 572 549 572 0.97

9 28 0.0072 0.92 12.1 0.2 1 23 628 650 628 650 0.97

10 28 0.025 3.2 10.4 6.1 2 23 662 683 661 683 0.96

11 28 0.061 7.8 9.1 1.8 2 23 695 716 694 716 0.96

12 28 0.0055 0.71 12.4 1.0 1 23 726 748 726 748 0.98

13 28 0.013 1.6 11.3 7.2 1 23 776 798 776 798 0.97

14 28 0.057 7.2 9.2 1.9 1 23 809 831 809 831 0.98

15 28 2.8e-05 0.0036 19.6 0.8 1 23 839 861 839 861 0.97

16 28 0.00096 0.12 14.8 0.1 2 23 881 903 880 903 0.97

17 28 0.017 2.1 10.9 1.7 1 23 921 943 921 943 0.96

18 28 0.35 45 6.7 3.7 1 23 950 972 950 972 0.96

19 28 0.043 5.5 9.6 1.1 2 23 983 1005 982 1005 0.95

20 28 0.0053 0.68 12.5 0.3 1 23 1027 1049 1027 1049 0.97

21 28 6.1 7.8e+02 2.8 3.9 2 23 1092 1114 1091 1114 0.94

22 28 0.033 4.3 10.0 0.1 2 23 1130 1151 1129 1151 0.92

23 28 5 6.3e+02 3.1 5.5 5 23 1161 1179 1159 1179 0.94

24 28 0.023 3 10.5 0.8 2 23 1190 1212 1189 1212 0.95

25 28 1.4 1.7e+02 4.9 3.2 3 23 1230 1247 1229 1247 0.88

26 28 0.11 14 8.4 1.6 2 21 1251 1270 1251 1271 0.94

27 28 1.8 2.3e+02 4.5 2.6 2 23 1319 1340 1318 1340 0.93

28 28 0.0013 0.17 14.4 0.3 2 23 1351 1373 1350 1373 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	4.7e-05	0.0059	18.9	0.4	1	23	120	142	120	142	0.98
2	28	0.00036	0.045	16.2	0.3	2	22	177	197	176	197	0.93
3	28	4.3e-06	0.00055	22.2	0.5	2	23	230	252	229	252	0.97
4	28	0.0001	0.013	17.9	0.5	1	23	303	326	303	326	0.95
5	28	0.019	2.4	10.7	0.6	1	23	348	370	348	370	0.96
6	28	0.0023	0.3	13.6	5.3	2	23	404	425	403	425	0.97
7	28	0.0024	0.3	13.6	3.7	2	23	477	499	477	499	0.97
8	28	3.5e-05	0.0045	19.3	1.1	1	23	549	572	549	572	0.97
9	28	0.0072	0.92	12.1	0.2	1	23	628	650	628	650	0.97
10	28	0.025	3.2	10.4	6.1	2	23	662	683	661	683	0.96
11	28	0.061	7.8	9.1	1.8	2	23	695	716	694	716	0.96
12	28	0.0055	0.71	12.4	1.0	1	23	726	748	726	748	0.98
13	28	0.013	1.6	11.3	7.2	1	23	776	798	776	798	0.97
14	28	0.057	7.2	9.2	1.9	1	23	809	831	809	831	0.98
15	28	2.8e-05	0.0036	19.6	0.8	1	23	839	861	839	861	0.97
16	28	0.00096	0.12	14.8	0.1	2	23	881	903	880	903	0.97
17	28	0.017	2.1	10.9	1.7	1	23	921	943	921	943	0.96
18	28	0.35	45	6.7	3.7	1	23	950	972	950	972	0.96
19	28	0.043	5.5	9.6	1.1	2	23	983	1005	982	1005	0.95
20	28	0.0053	0.68	12.5	0.3	1	23	1027	1049	1027	1049	0.97
21	28	6.1	7.8e+02	2.8	3.9	2	23	1092	1114	1091	1114	0.94
22	28	0.033	4.3	10.0	0.1	2	23	1130	1151	1129	1151	0.92
23	28	5	6.3e+02	3.1	5.5	5	23	1161	1179	1159	1179	0.94
24	28	0.023	3	10.5	0.8	2	23	1190	1212	1189	1212	0.95
25	28	1.4	1.7e+02	4.9	3.2	3	23	1230	1247	1229	1247	0.88
26	28	0.11	14	8.4	1.6	2	21	1251	1270	1251	1271	0.94
27	28	1.8	2.3e+02	4.5	2.6	2	23	1319	1340	1318	1340	0.93
28	28	0.0013	0.17	14.4	0.3	2	23	1351	1373	1350	1373	0.95

Sequence Information

Coding Sequence: ATGCTTACAGGGTCCAGCTCCACCCCGGTTCCACCAAACAGGACCAGTAGTGATTCTGTTTCTTCCATTAACACCGAGGTTACCAATCAAACAAAACCGTCTCAGGCCTCCGAGGTGGAATCTACCAAAAGGAACAGTCGCAAGCGTAGTCACGAAAGCCTGGAAATTGCATCTGCCAGTAGCAAATCAAACGAGTTCCGGCCTACTAATTCAAAAAGAATTGAGGAACTGAAAAGTAGCCACAAGAAGCCTCGGGTGACATCTAGCAATTATTATATGGATTCAGATTACGAAGATAATAGCGCTTCTCAATTCTCGGCTGAAACAGATTCTGATGAACCCTTACTAAGAGATGACTTCAAGTGTAAAGTTTGTGGACGGCAGTTCCCGTCGGCGAAGAGCTTAGCGTCACACTCCCGAATTCATTCTGGCAAAACAAGCAAGGAGAAAGATACCCTTACTGAAAATGTACTTGTAACTATTCCAAAGAAAAATGTACAGGACGCAATTGACGTAGAAGACCAAATTAGCTGCGAGTTATGCGGAAAAAGTTTCAaattgaaaataatgctgaagcGTCACCAGGAGACCTGCGGCAAGTCTCCACAAAAGACACCCCCCAAACCGCTCCAGAAGGAGTTACTCATATCGCTGGAGCCCATAGACGGTATTCATGCGAATAGAATCAAATGCACCATTTGCACGACTACCTTCAAAACCATTGAGAATCTTGAAAAGCATATGAGAGTAGTCCATGCGGCTGCCCTTCCGAAAGTTAAAACGGAGCCGAGAACGAACAACGGCAAGGTCTCCGTTCCCTGTATTTACTGTAGCAAACCTTTCGACGACTATTATGTTCACAGTGAACATTTCAGTAAATGTCCGGAAAGTACTAACGCGACCACATTCCCGTGCCCAGTTTGCAAGAAAGTGACAACACGGAAGGCTTCATATTTCCGGCACATCAAGGACGTGCACTTCGAGCCGCAGGTGTGGTCACTGAAGCCGGAGACGCCGGAGCAGGGCCCGGCGGCGGCGCTGTTCGAGTGCCGCATGTGCCACAAGCGGCTGCCCACGGAGCAGCAGCTCATCACGCACCTGGCCGCGCACGTCTCCAACATCGAGGGCACAGACGGTGACGAGTCCAGGCCAAGTACGATTGACGACTCCTCGTCAATAATATCGGACAATAGTGGAAACGGTCCTCTGAAGTGTAAATTTTGCGATAAACatttcaaatataaaaaatcgtTAGCGACCCATGAGATGAAACATTTCGAACTTGAAAAAACTGAGCAAAATCAAAAGCAAGAAAAGGCAGCCAACGAAGAAACAGAAGAAACGGACGGGAACGCGTCGAGCAGCCTGTTGAACGAGTCGTACCGCGAGGACGAGGAGGACTCGAGCCAGGAGGAGGGCGACGACAACACTTGCGACATCTGCGAGAAGCAGTTCTCGTACCGGCGGCTGCTTGTGCACCACAAGCGCACCAAGCACAACATGAGCTCCGGCACCAAGCGCGCCAGCGTCGTGCTCAAGAACTGCCTCGCGCGCTGTCTCGTCTGCGATCTCGAGATGAGCGTCGGCGACATCAACGAACACAACAAGCAGCATATCCAGCAGAACATGAAACCGCGCAATCTCTACACGTGCACTGATTGCGGTGAGAAGTTCAAGAGCTGCAACGCTCTGGCCAACCACATCAAGCTGGTGCACAGGCTCAAGCGGCTGCCGCCCAAGCAGTTCGAAGGTGCTGATCTGGCGGATTTTTGTGAGGTCGTTGTGACGAAAGCGGAACCCCTGGACGTGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCAGAGGACCAGGAGGGCTCACCCTTGGTCAATCTCAGTGGATTTAATTGTACTATTTGTGGAAAGAACATGCCCACTCTCATTTCCCTGAAACGGCATGTCAACTGGCATTCAAATGTTGGaaataatttagaaaaaaagCTAGAGTGCTTCGTTTGCAAAGagACATTCCGGTTTCAATGTCATTACAAATTACATATGCGCGAGCACTACCGCGACACGAATCTGGATCCCAAACTGCTCACCTGCACTATCTGCAACCGGAAAAGCAAACACTTGAGGGCTGCTCAGGCCCATATGAACTACCACAAACAAACCCGATTTAAGAATAACGACTATCAGTGCTCCATATGCAAGCGTGTTTTCCAATACCGAAAGGTCTATCTCTCTCACATGGCAATACACTACAAGCGTGGTGAAAGCCAGAACACGATCGTAGGGGACTTATTACCTACCACTGCTGATAAAACCGTTTTTGACGGTACTCATACTTGCCTTCATTGCGGAAAAGTCTGTGACTCGGAGAACTCTCTAAAACATCATATGTCTTGGCACAGATCAAAGACTTTACTGTTTGGCGCGCGACACGAGTGTCCCATTTGCCTCGTCATGTTCACTAATAAAAAAAGGCAAGAGCTACACACGCGAACTCATTATGAAGACGAAAACGGACCATTCAAGTGTACGATATGTGGCAAAGGCTACACCGACGAAGAATACTTCCGTCGGCACGTGAAAGGTCACAACTTCGATCACCAGTCTCACAAAGACCGCATAGCGAAGTTGCGAAAGGACAAGGTGAAGTGCCCTATCTGTGTGCGTTACTACCCCGACTGGGTGAAGCTGATCCGGCACCTGCGGCGCACGCACCCCGAGAGCAAGATGGTGAAGCAGGACCCtgacgcgcccgcgccgcgcgtgTTCGCGTGCAAGCTGTGTGCCAAGGTGTTCCGCGACGAGCGCCGCTTGCGCCACCACGAGGAGTCGCATCTGCGCAAGCCCGAGTTCTTCAAGTGCAAGTTCTGCGGGAAGAAAACTATCTCGCTCAAAAACCATAACCTACACATTAAAGGACATCTCACTTCTAAACACTTCGAAAACCCCCTAAAGTGCACTCAGTGTGAGGAGACTTTCATCAAGGGATATGATTTGCATTACCATCTGCGAGATGTACACGACATTAATGAAACATGGATTGCGGAACGCAAAGAGCAAACACTAAACGGGCCTTTGAAAGAGTTTCAATGCTCTATTTGTCTTAAAATTCTTGCAAGTAAAGGCAACTATGAGAGGCACTTGGATTACCACAATTCGCTGAGGTGCAACTACTGCTACGACTATTTCAGTTCACTGAGGTTCCTGGAAGGACATCTGACTTTTAGTTGTGATAAAAAGAAGTTAGTTGGTGATACTGAGATATATCCGAGGAAGATTAAATGTAATATTTGCTATAAACCATTCCATTTACAAGTAAAATTGGATTGCCATTTGCGCACGCAACATAATATAAAAGTGTCTAAAGAAGCTTCAAAGAGCAAAAAAGACCTTGTATGTGATTACTGCTTTAGAGTATTCGAAAACCTCGATGCACTGACTGGGCACAAAGTGTATCACCGTACCATTGGTTATTTTGGCTGCATATATTGCAAGAGAAAATTCAACACTCTGACTCTGTACAGGAAACATAAGAACCACCACTTTGCTCAGTTAAACGTGGATAGCCCTACTAAGTGCGAACACTGCGACGAGACGTTCGTCGCGTTCCGGGAAATGATATACCACATGAGGGACGTGCACGGGGACGACAAGGAGTGGCTCGTGATGCCGAAGGAGTCGATCGAGGAGCCGTGCCCCGTATGCCACAAGGTGTTCTTCAACTTGCACCGGCACCTGGACTACCACGAGGAGAACCGTTGCAAGAAGTGCGGCGAGTACTTCTTCTCGCGCACCGACCTCGACAACCACCTGTGCGCCATCGAGAGCGAGGACGAGGCGGGCAGCGACGAGCGCGACGTGCGCCCCAAGTACGAGGAGTGCCGCTTCTGCTTCAAGCCCATCACCAGGAAGAGCTCCAAGGCGAAGCACGACCACATACATAAAGGCTCTGGATCTATCTCTTGTCGATTCTGTTCGCACAAATTTAAAACAATGGACGCATTCAACATTCATGCATTTTCTCATCGCAACCGCAAGTACAGAAAAAATCCATTAAAGTGTCGAAAGTGCGGCGAGAAATTTATTCAGTACGGGCCCTTCATAAAGCACATGAGAGGAGTGCACAAATTCGTTCAAAAAATGCACTACCGAGCGACCGTGAAGGCGGAGCCCTGCGCGGTGTGTGGGGACGAGTTCCCCAACCTGCATAACCACTACCGGGCGCATCTGCAGAACCAGTGCCCCTCATGCCTCAAGTACTTCACCTCGGCCAAGGTGTTCGCCGAGCACGAGTGCGCTAAGGAAGACTCCGACCCCACCAAGGTGTTCACCTGCGACGAGAACTTGCCCTGGTTGATCAACACCTATGTTCCCAAAGACGAACTGGACGAACAAAAGTATTACGGCTACGGAGATGAGGAGGAGGTAGACAGCGGCGTGCGGCTGCAGGGCCACATAATAGACGAAGAAAGTCAGAATTCGAATGAGAACTTGGACTTCCAACTGCAGTGTCCCATCATATCGGACGTGCTGTCGCTGTGCCAGAAACAAGAGGCGGAGgagcgcgcgcccgcgcccgcgcccgaggTCGAGATCATCGACCTCTCCGACGACGACGTGGGCCTGGTGGACTCCGGCGCCAACTGTCCCACCATCACCATTGatgattaa
Protein Sequence: MLTGSSSTPVPPNRTSSDSVSSINTEVTNQTKPSQASEVESTKRNSRKRSHESLEIASASSKSNEFRPTNSKRIEELKSSHKKPRVTSSNYYMDSDYEDNSASQFSAETDSDEPLLRDDFKCKVCGRQFPSAKSLASHSRIHSGKTSKEKDTLTENVLVTIPKKNVQDAIDVEDQISCELCGKSFKLKIMLKRHQETCGKSPQKTPPKPLQKELLISLEPIDGIHANRIKCTICTTTFKTIENLEKHMRVVHAAALPKVKTEPRTNNGKVSVPCIYCSKPFDDYYVHSEHFSKCPESTNATTFPCPVCKKVTTRKASYFRHIKDVHFEPQVWSLKPETPEQGPAAALFECRMCHKRLPTEQQLITHLAAHVSNIEGTDGDESRPSTIDDSSSIISDNSGNGPLKCKFCDKHFKYKKSLATHEMKHFELEKTEQNQKQEKAANEETEETDGNASSSLLNESYREDEEDSSQEEGDDNTCDICEKQFSYRRLLVHHKRTKHNMSSGTKRASVVLKNCLARCLVCDLEMSVGDINEHNKQHIQQNMKPRNLYTCTDCGEKFKSCNALANHIKLVHRLKRLPPKQFEGADLADFCEVVVTKAEPLDVIQSHNGFGEVPEDQEGSPLVNLSGFNCTICGKNMPTLISLKRHVNWHSNVGNNLEKKLECFVCKETFRFQCHYKLHMREHYRDTNLDPKLLTCTICNRKSKHLRAAQAHMNYHKQTRFKNNDYQCSICKRVFQYRKVYLSHMAIHYKRGESQNTIVGDLLPTTADKTVFDGTHTCLHCGKVCDSENSLKHHMSWHRSKTLLFGARHECPICLVMFTNKKRQELHTRTHYEDENGPFKCTICGKGYTDEEYFRRHVKGHNFDHQSHKDRIAKLRKDKVKCPICVRYYPDWVKLIRHLRRTHPESKMVKQDPDAPAPRVFACKLCAKVFRDERRLRHHEESHLRKPEFFKCKFCGKKTISLKNHNLHIKGHLTSKHFENPLKCTQCEETFIKGYDLHYHLRDVHDINETWIAERKEQTLNGPLKEFQCSICLKILASKGNYERHLDYHNSLRCNYCYDYFSSLRFLEGHLTFSCDKKKLVGDTEIYPRKIKCNICYKPFHLQVKLDCHLRTQHNIKVSKEASKSKKDLVCDYCFRVFENLDALTGHKVYHRTIGYFGCIYCKRKFNTLTLYRKHKNHHFAQLNVDSPTKCEHCDETFVAFREMIYHMRDVHGDDKEWLVMPKESIEEPCPVCHKVFFNLHRHLDYHEENRCKKCGEYFFSRTDLDNHLCAIESEDEAGSDERDVRPKYEECRFCFKPITRKSSKAKHDHIHKGSGSISCRFCSHKFKTMDAFNIHAFSHRNRKYRKNPLKCRKCGEKFIQYGPFIKHMRGVHKFVQKMHYRATVKAEPCAVCGDEFPNLHNHYRAHLQNQCPSCLKYFTSAKVFAEHECAKEDSDPTKVFTCDENLPWLINTYVPKDELDEQKYYGYGDEEEVDSGVRLQGHIIDEESQNSNENLDFQLQCPIISDVLSLCQKQEAEERAPAPAPEVEIIDLSDDDVGLVDSGANCPTITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00412737;
90% Identity: iTF_01072797;
80% Identity: -