Basic Information

Insect: Notocelia uddmanniana
Gene Symbol: -
Assembly: GCA_905163555.1
Location: LR991078.1:11316705-11318963[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0058 7.6 8.3 1.6 17 43 5 28 2 29 0.90

2 16 0.0056 7.3 8.3 0.0 18 43 65 87 64 88 0.92

3 16 0.00017 0.22 13.2 0.8 17 44 95 119 93 119 0.92

4 16 0.0048 6.3 8.5 0.3 18 43 126 148 122 149 0.88

5 16 0.00086 1.1 10.9 2.1 15 43 153 178 150 179 0.89

6 16 0.0084 11 7.7 1.6 17 44 184 208 180 208 0.89

7 16 0.24 3.1e+02 3.1 0.1 15 44 232 258 220 258 0.72

8 16 0.099 1.3e+02 4.3 0.9 12 43 278 306 265 307 0.90

9 16 0.022 29 6.4 0.0 15 44 340 366 336 366 0.85

10 16 0.23 3e+02 3.2 4.2 18 43 387 409 379 410 0.90

11 16 0.24 3.2e+02 3.1 5.5 13 29 411 427 408 439 0.74

12 16 0.0019 2.5 9.8 3.1 12 43 439 467 430 468 0.78

13 16 0.11 1.5e+02 4.2 0.8 17 44 473 497 469 497 0.85

14 16 2.2 2.9e+03 0.0 0.3 22 43 538 556 532 557 0.71

15 16 7.8 1e+04 -1.7 0.4 12 28 558 574 554 581 0.81

16 16 0.00011 0.14 13.8 0.9 18 43 598 620 585 621 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0058	7.6	8.3	1.6	17	43	5	28	2	29	0.90
2	16	0.0056	7.3	8.3	0.0	18	43	65	87	64	88	0.92
3	16	0.00017	0.22	13.2	0.8	17	44	95	119	93	119	0.92
4	16	0.0048	6.3	8.5	0.3	18	43	126	148	122	149	0.88
5	16	0.00086	1.1	10.9	2.1	15	43	153	178	150	179	0.89
6	16	0.0084	11	7.7	1.6	17	44	184	208	180	208	0.89
7	16	0.24	3.1e+02	3.1	0.1	15	44	232	258	220	258	0.72
8	16	0.099	1.3e+02	4.3	0.9	12	43	278	306	265	307	0.90
9	16	0.022	29	6.4	0.0	15	44	340	366	336	366	0.85
10	16	0.23	3e+02	3.2	4.2	18	43	387	409	379	410	0.90
11	16	0.24	3.2e+02	3.1	5.5	13	29	411	427	408	439	0.74
12	16	0.0019	2.5	9.8	3.1	12	43	439	467	430	468	0.78
13	16	0.11	1.5e+02	4.2	0.8	17	44	473	497	469	497	0.85
14	16	2.2	2.9e+03	0.0	0.3	22	43	538	556	532	557	0.71
15	16	7.8	1e+04	-1.7	0.4	12	28	558	574	554	581	0.81
16	16	0.00011	0.14	13.8	0.9	18	43	598	620	585	621	0.88

Sequence Information

Coding Sequence: ATGTCTCAAGAATACGTCTGCGATTATTGCAGCCGTACTTTTACAAGGAAGTACAACCTTCAGACCCACATAGAGAACTGCCATATCAACTCAACATGCTACTGCGATATCTGCGACCAGCGGTTCGGGAGCCCAGCTGGTCTTCAGCTCCATCTCAGCCGAGGCCACAATCGCTTCATGCAGCCCTACCCAGAATGCGATCTCTGCGGACGAATCTTCACAAGAAAGCAAAACGTTGTCTCACACATGGTCACCGTCCATTTGCAAGGCGTCGGTCCACAGATACAATGCAAAGTCTGCGGGAAGACTTTCACCACGGAAAGGAACTTGAAACGACACATGAATCAGTTACATAATCCTGATGTTCAGTACCCTACATGCGACTATTGTAAGAAAGCTTTTAAAGGAAAGCATTCGTTGTTAGCTCATATACAAGCTACACACAACGTTTTAAAAGGAATAATAAAGTGTCATCTATGTGATAAAGTCTACACTAATAACAGGAATTTGAAGCGGCATATAGAAATGTATCACGGGGAGAAGGGGGAGTTTAAATGTACTTTATGTACTAAAGTATACACTTCCAACCAGAGTCTTCGACGTCACGCCAGGACTAGACATAATACAGACCAGGATAGAACTGAATCTTTGGAGCAAGATGAATATTATAACTtcgattttaaaatacagctaCAAGAGTCCAACTGTGACTATTGCGAACAATTCTTTCCTGACGAACCCACTTTACGTCAACATATTAAATCTGACCATCCTTTCAAAATGTTCTATGAATACTGCAGAAATTCGCTACTCAGACAAACTGGAAAGAGTGAGAAAGAGAGATTTTACAATTGCGAGAACTGCAATAACGTTTTTAACTCTGTCTACGAACTTAAAGATCACATGAAAACCAGTCATGATAGAGAATATTCTTTATCAACTTGCAACGTTTGCTTCTCAAAGTTCTACAGCAAAGAAACTATGTTTGAGCATAAGAAGATATGCCTCCCGCCGCCTAACGTGAACAACTGTAATTACTGTGACAAACTCTTCACAGATATCTCTAGCCTCGAGTTTCACATAAGAATCTTCCACCCGCAAGCACAAATAGACAACGATGTCTCATCAACGAACCCCGACGAAGCTGAGGCTGGTTTTAAATGCGTCCACTGCGACAGGATCTACTATAGCGACCGCTCTCTAAAACATCACATGAAGCTCAAGCACACGACGGACGAAGCTGTCGACTGTAACATATGCGGAAAAATCTGCAATAACAAGTATTACCTAGCTTCCCATATCAAAATCGTGCACAACAACGACTCCTGGTCGAAATGCGATTATTGCGAGAAGCAATTTAAATCAAAAAGGAATATCCGGCGGCACATAGAATACACACACTTGGGCATGCAACGGTATAAGTGTATAGAATGTGAGACTCTTTTCAAAGAAAAACGGAGTCTTAGAAAGCATGTCCGCACGAAGCATCCGAACTCGACAGTGTTTCCCCAATGCCATATCTGTTACAAACGCTTCGAATCTGCAAAGTCTtgcaaaatacatttaaaactgcTGCATTCGTTCAACATGAATACCCACCCGTGCGATCTCTGTTCGGTCTCATTCAGCTCCAATGAAGCGTTGTCCATCCACCTCCAAACTAAACACTTAGCTAAAGACCAGATCTTTAAATGCGAGCCATGTAACCTTGTCTTCAATGGGCAGGACAAATTTGAACAACACAACGAACTCTACCACGTCAGTCTGCCGATGAAGCAAAAGATATTACCTCGCTGCATCATATGCATGAAGGACTTCAGTACGCGAAAAACTTTAAAGCGTCATATTAAGAAATTCCACGATGACTTTGACCCGGAAGAACTAGCAACATACGGGTCTAAGAAGCGAATGTTCAACATAAATTGTGAAGAATGCATACAGAACTTCAACGATGATTTCTACTTAGATGTCTACCAAAagctcaaacatttaaaagacTCGGTAGTCTTTAAATGCGAAAGCTGTTCATCTTCATACAACTGCTTGGAGTATTCTATACAGAGACATAAAGATACTAACTTAGAGTCACATAAGACTAAGATGGTACTCAGCGAGTTGTGTACGGCTGTGATGAGTGATGCGTCCAACAGTGGGTGGGTTGAGTCGGTAGAGGCAGAGAGTACGACTGAAGACTTAAATGTAAAGGAGGAACCGATGGAGGTGGAAGATATAGTGAAGACTGAGCCTATGTCACCGTGA
Protein Sequence: MSQEYVCDYCSRTFTRKYNLQTHIENCHINSTCYCDICDQRFGSPAGLQLHLSRGHNRFMQPYPECDLCGRIFTRKQNVVSHMVTVHLQGVGPQIQCKVCGKTFTTERNLKRHMNQLHNPDVQYPTCDYCKKAFKGKHSLLAHIQATHNVLKGIIKCHLCDKVYTNNRNLKRHIEMYHGEKGEFKCTLCTKVYTSNQSLRRHARTRHNTDQDRTESLEQDEYYNFDFKIQLQESNCDYCEQFFPDEPTLRQHIKSDHPFKMFYEYCRNSLLRQTGKSEKERFYNCENCNNVFNSVYELKDHMKTSHDREYSLSTCNVCFSKFYSKETMFEHKKICLPPPNVNNCNYCDKLFTDISSLEFHIRIFHPQAQIDNDVSSTNPDEAEAGFKCVHCDRIYYSDRSLKHHMKLKHTTDEAVDCNICGKICNNKYYLASHIKIVHNNDSWSKCDYCEKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTVFPQCHICYKRFESAKSCKIHLKLLHSFNMNTHPCDLCSVSFSSNEALSIHLQTKHLAKDQIFKCEPCNLVFNGQDKFEQHNELYHVSLPMKQKILPRCIICMKDFSTRKTLKRHIKKFHDDFDPEELATYGSKKRMFNINCEECIQNFNDDFYLDVYQKLKHLKDSVVFKCESCSSSYNCLEYSIQRHKDTNLESHKTKMVLSELCTAVMSDASNSGWVESVEAESTTEDLNVKEEPMEVEDIVKTEPMSP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00680825;
90% Identity: iTF_01072782; iTF_00660525; iTF_00656355; iTF_00657476; iTF_00658660; iTF_00656329; iTF_00659629; iTF_00658608; iTF_00657433; iTF_00660510; iTF_00654511; iTF_00289872; iTF_00654482; iTF_00289854;
80% Identity: iTF_01072782;