Basic Information

Insect: Epinotia brunnichana
Gene Symbol: -
Assembly: GCA_963854355.1
Location: OY977961.1:15931053-15933311[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0017 3 9.9 2.0 18 43 6 28 4 29 0.95

2 16 0.0053 9.5 8.3 0.0 18 43 65 87 64 88 0.92

3 16 0.00014 0.25 13.4 0.8 17 44 95 119 93 119 0.92

4 16 0.0046 8.2 8.5 0.3 18 43 126 148 122 149 0.88

5 16 0.00082 1.5 10.9 2.1 15 43 153 178 150 179 0.89

6 16 0.011 20 7.3 0.8 17 44 184 208 180 208 0.89

7 16 0.004 7.2 8.7 0.0 3 44 221 257 219 257 0.86

8 16 0.0079 14 7.8 0.5 11 43 276 305 271 306 0.90

9 16 0.02 36 6.5 0.0 15 44 339 365 335 365 0.85

10 16 0.28 5e+02 2.8 6.3 17 43 386 409 377 410 0.86

11 16 0.5 8.9e+02 2.0 3.4 14 29 412 427 409 439 0.74

12 16 0.0049 8.8 8.4 2.7 12 43 439 467 430 468 0.78

13 16 0.11 1.9e+02 4.2 0.8 17 44 473 497 469 497 0.85

14 16 1.9 3.4e+03 0.2 0.3 19 43 535 556 531 557 0.72

15 16 7.6 1.3e+04 -1.8 0.4 12 28 558 574 552 580 0.81

16 16 0.00023 0.41 12.7 0.9 18 43 598 620 585 621 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0017	3	9.9	2.0	18	43	6	28	4	29	0.95
2	16	0.0053	9.5	8.3	0.0	18	43	65	87	64	88	0.92
3	16	0.00014	0.25	13.4	0.8	17	44	95	119	93	119	0.92
4	16	0.0046	8.2	8.5	0.3	18	43	126	148	122	149	0.88
5	16	0.00082	1.5	10.9	2.1	15	43	153	178	150	179	0.89
6	16	0.011	20	7.3	0.8	17	44	184	208	180	208	0.89
7	16	0.004	7.2	8.7	0.0	3	44	221	257	219	257	0.86
8	16	0.0079	14	7.8	0.5	11	43	276	305	271	306	0.90
9	16	0.02	36	6.5	0.0	15	44	339	365	335	365	0.85
10	16	0.28	5e+02	2.8	6.3	17	43	386	409	377	410	0.86
11	16	0.5	8.9e+02	2.0	3.4	14	29	412	427	409	439	0.74
12	16	0.0049	8.8	8.4	2.7	12	43	439	467	430	468	0.78
13	16	0.11	1.9e+02	4.2	0.8	17	44	473	497	469	497	0.85
14	16	1.9	3.4e+03	0.2	0.3	19	43	535	556	531	557	0.72
15	16	7.6	1.3e+04	-1.8	0.4	12	28	558	574	552	580	0.81
16	16	0.00023	0.41	12.7	0.9	18	43	598	620	585	621	0.85

Sequence Information

Coding Sequence: ATGCCTCCAGAATATGTCTGCGATTACTGCACTCGCACATTTACGAGGAAGTACAACCTCCGAACCCACATAGAGAACTGTCATGTCAACTCCACATGTAACTGCGAGATCTGTGACCAAAGATTCGGGAGCCCTGCAGGTCTTCAGCTGCATCTCAGTAGAGGCCATAACCGCTTCTTGCAGCCCTACCCTGAGTGCGATCTCTGCGGGCGAATCTTCACTAGAAAACAAAATGTCGTCTCACACATGGTCACTGTCCATTTACAAGGCGTTGGTCCCCAGATTCAATGTAGAGTCTGCGAGAAGACTTTCACGACGGAAAGGAACTTGAAGCGACATATGAATCAGCTACACAATCCTGATGTTCAGTATCCTACTTGCGATTACTGTAAAAAAGCGTTCAAAGGCAAACATTCGCTGTTAGCTCACATACAAGCCACACACAACGTTTTAAAAGGAATAATAAAGTGTCATCTATGCGATAAAGTGTACACTAACAACAGAAACCTGAAGCGGCATATAGAAATGTATCACGGGGAGAAGGGAGAGTTTAGATGTACTCTATGCCCTAAAGTGTACACATCGAATCAGAGCTTGCGTCGCCACGCCAGAACTAGACATAATACTGACCAGGACAAGGACTCTACGGAACAAGACGACTATTACAACTACGATTTTAAAGTCCAGCTTCAAGAATTCAACTGCGAATATTGCGAACAGTTTTTCTCCGACGAACCGACTCTACGCCAGCACATAAAGTCTGACCATCCTTTCAAAATTTTCTATGAATATTGCAGAAATTCTCTACTCAAACAATCGCGGAAGAGCGAGAAAGAAAAGTTTTACAATTGCGAGACTTGCAATAACGTTTTTAACTCGGTTTACGAATTGAAGGACCATATGAAGACCAGCCACGATAGAGAATACTCTCTATCGACTTGCAATGTTTGCTTCTCCAAGTTCTACAGCAAAGAGACCATGTTTGAACATAAAAAGATATGCCTCCCGCCAGCTAACGTCAACAACTGTAACTACTGCGATAAATTGTTTACAGACATCTCCAGCCTCGAGTTCCACATAAGAATCTTCCACCCACAAGCGCAGATAGCTGATAACGATGTATCCTCAACAAATCCTGACGAAACTGAGGCTGGTTATAAATGCATCCACTGCAACAGGATGTACTATAGCGACCGCTCTTTAAAACATCACATGAAGCTCAAACACACCACAGACGAAGCTGTCGACTGTGGTCTATGCGGGAAAATCTGCAATAACAAATATTACTTAGCGTCCCACATCAAAATCGTGCACAACAACGATTCCTGGTCCAAATGCGACTATTGCGACAaacaattcaaatctaaaaGGAATATCCGACGTCACATCGAATATACGCACTTAGGCATGCAGAGATACAAGTGTATAGAATGCGAGACGCTTTTCAAAGAAAAGCGGAGTCTTAGAAAGCACGTTCGCACAAAGCATCCCAACTCAACAGTGTTTCCCCAGTGTCATATCTGTTATAAACGCTTCGAATCGGCCAAGTCTTGCAAGATTCACTTAAAGCTCCTGCATTCGTTCAACATGAATACTTATCCATGTGATCTTTGCTCTGTATCCTTCAGTTCCAACGAAGCGTTGTCCATCCACCTCCAAACTAAACACTTAGCTAAGGACCAGATCTTTAAATGCGAGCCATGCAACATTGTTTTCAACGGACAGGACAAATTTGAACAACACAACGAACTTTACCACGTAAGTCTACCGATCAAGCAAAATATTTTACCGCGCTGCATCCTATGCATGAAAGACTTCAGCACGCGAAAAACTTTAAAGCGACACATTAAGAAATTCCACGGTGATTTTGATCCAGAGGAGCTAGCAACGTACGGCTCAAAGAAACGAATGTTCAACATAGACTGTGAGGAGTGTGTTCAGAATTTCAACGACGATTTTTACTTGGATGTCTATCAAAAGTTGAAACATTTGAAAGACTCGATCGTCTTCAAATGTGAAAGCTGTTTAACCTCATACAACTGCTTGGAATACTCTATCCAGAGACATAAAGTGAGTAACGCAGAGTCGAGTAAGACTAAGATGATACTGAGCGAGCTGTGTACGGCTGAGATGAGTGATGCTTCCAACACTGGATGGGTTGCTTCGGTGGAAGCTGAGAGTACGACGGGAGACTTGACTGTGAAGGAAGAACCTATGGAGGTGGATGACATAGTGAAGACAGAACCGGTGTCTTCgtga
Protein Sequence: MPPEYVCDYCTRTFTRKYNLRTHIENCHVNSTCNCEICDQRFGSPAGLQLHLSRGHNRFLQPYPECDLCGRIFTRKQNVVSHMVTVHLQGVGPQIQCRVCEKTFTTERNLKRHMNQLHNPDVQYPTCDYCKKAFKGKHSLLAHIQATHNVLKGIIKCHLCDKVYTNNRNLKRHIEMYHGEKGEFRCTLCPKVYTSNQSLRRHARTRHNTDQDKDSTEQDDYYNYDFKVQLQEFNCEYCEQFFSDEPTLRQHIKSDHPFKIFYEYCRNSLLKQSRKSEKEKFYNCETCNNVFNSVYELKDHMKTSHDREYSLSTCNVCFSKFYSKETMFEHKKICLPPANVNNCNYCDKLFTDISSLEFHIRIFHPQAQIADNDVSSTNPDETEAGYKCIHCNRMYYSDRSLKHHMKLKHTTDEAVDCGLCGKICNNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTVFPQCHICYKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSNEALSIHLQTKHLAKDQIFKCEPCNIVFNGQDKFEQHNELYHVSLPIKQNILPRCILCMKDFSTRKTLKRHIKKFHGDFDPEELATYGSKKRMFNIDCEECVQNFNDDFYLDVYQKLKHLKDSIVFKCESCLTSYNCLEYSIQRHKVSNAESSKTKMILSELCTAEMSDASNTGWVASVEAESTTGDLTVKEEPMEVDDIVKTEPVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00680825;
90% Identity: iTF_01072763;
80% Identity: iTF_00657476;