Ninv004065.1
Basic Information
- Insect
- Nicrophorus investigator
- Gene Symbol
- Bgb
- Assembly
- GCA_963457615.1
- Location
- OY735140.1:35699320-35714349[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-86 4.5e-82 273.9 1.3 1 164 33 192 33 195 0.97
Sequence Information
- Coding Sequence
- ATGCATATGAACGATTCCGCTTCAGCTTTGGCCGGTATGTTACCCTTTGACTCGATCGGTCTGTACGAGCAACCCAAACCTAGGTTCATCTTCAAGATGCCTAGGGTAGTGCCCGATCAAAAAGCAAAATTCGAATCCGACGAACTCTTCAGGAGATTGAGCAGAGAAAGCGagGTTCGTTTCACTGGATACAGAGATAGGCCGCAAGAGGAAAGACAAGTGCGTTTCCAGAATGCTTGCCGCGAAGGACACACGGAAATCGCTTTCGCAGCGACGGGAACCAACcttcaattagttttcaacCCACCCACAAATGGATACATGCCTGAAAGAGAATGCGATTTCGAGAAAGAAGCTGGAAAGGTGCATATAAAGTCTTCGTTTATAATGAACGGTGTCTGCGTGAAATGGAGAGGTTGGATCGATCTGGAAAGGTTGGACGGTGTCGGCTGCTTGGAATACTGCGAGGAGCGCGCCGCCGCCGAAGACGCTATACTTCGTGAGCAGATAGAGAGGTACAACCAGAGGCTGCGCGAGTTCGAGGACAAGCAGCGAGGATACAGACAGGAAAGGCCCGACCAGGATTTGGATTTGCGAATGGCAAACAACATCCACGGTCACCATGGACACCACGGGGCGGCACCGATTTCCCGTTGCCATGGACCCCAGAGACACGGACTCTCCTTGCAAGTAGGCATACCGCTCACACCACCCTAA
- Protein Sequence
- MHMNDSASALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKAKFESDELFRRLSRESEVRFTGYRDRPQEERQVRFQNACREGHTEIAFAATGTNLQLVFNPPTNGYMPERECDFEKEAGKVHIKSSFIMNGVCVKWRGWIDLERLDGVGCLEYCEERAAAEDAILREQIERYNQRLREFEDKQRGYRQERPDQDLDLRMANNIHGHHGHHGAAPISRCHGPQRHGLSLQVGIPLTPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01058886; iTF_01277444; iTF_01311323; iTF_01344676; iTF_01121343; iTF_00421957; iTF_01329546; iTF_00870321; iTF_00348585; iTF_00277906; iTF_01013107; iTF_00394043; iTF_00639294; iTF_00130245; iTF_00841606; iTF_01479885; iTF_00019952; iTF_00764435; iTF_01120640; iTF_00920423; iTF_01498642; iTF_00631269; iTF_00269512; iTF_00927265; iTF_00950481; iTF_01293332; iTF_00267893; iTF_00270808; iTF_00272220; iTF_01291231; iTF_01257734; iTF_01040616; iTF_01038988; iTF_00872823; iTF_01229509; iTF_00469395; iTF_00813481; iTF_00986897; iTF_00986898; iTF_00814164; iTF_00929333; iTF_01366103; iTF_01097193; iTF_00136586; iTF_01098260; iTF_00807405; iTF_00021971; iTF_00949560; iTF_00151689; iTF_00003526; iTF_00853711; iTF_00788286; iTF_00838176; iTF_00110303; iTF_00721769; iTF_00910283; iTF_00735245; iTF_01368782; iTF_00852443; iTF_00049024; iTF_00083666;
- 90% Identity
- iTF_01329546;
- 80% Identity
- -