Nsal012622.2
Basic Information
- Insect
- Nebria salina
- Gene Symbol
- Bgb
- Assembly
- GCA_944039265.1
- Location
- CALUEJ010000117.1:882505-891451[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-85 4e-81 271.5 1.8 1 165 35 196 35 198 0.96
Sequence Information
- Coding Sequence
- ATGCACCATTCGATGAACGATCCGACGGCTGCCCTCGCGGGTATGCTGCCGTTCGATTCAATCGGATTATACGAACAACCGAAACCgcggtttatttttaaaatgcccCGGGTCGTGCCCGACCAGAAATCGAAGTTTGAGTCGGATGAACTGTTTCGGCGATTGAGTCGTGAAAGCGAGGTCAGATATACAGGATATAGAGATCGACCACAAGAAGAACGTCAAGTTCGGTTTCAGAATGGATGCCGAGAGGGACACACTGAAATCGCTTTCGCGGCTACTGGAACCAACCTACAACTTGTCTTCTCCACACCGAATACCGCTGGCTATGCTCAAGACAGGGAGTGCGATTTCGACAAAGAACACGGCAAgGTTCATATTCGTTCCGCTTTTATTATGAATGGCGTCTGTGTCCGATGGCGGGGCTGGATCGATCTAGAGCGTCTGGATGGGGTTGGATGTCTGGAATATTGCGAGGAACGAGCGGCGGCAGAAGATGCGCTACTGCGGGAACAAATCGATAGGTACAACCAAAGATTGCGAGAGTTTGAAGATAAACAACGAGTCTATCGAGGACAACAAGATAGAGCCGAACAAGATCTTGAGtTACGTATGTCTGGTGGAATCCATGGTCACACTCACCATGGTCATCATGGAGCATCGCCTGTGTCTGCCCGGTGTCACGGGCCACCAAGACATGGATTACCCTTGCAAGGACGAAAGAAAGCTGATTTAAATCACGGACATCATAATTAG
- Protein Sequence
- MHHSMNDPTAALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRDRPQEERQVRFQNGCREGHTEIAFAATGTNLQLVFSTPNTAGYAQDRECDFDKEHGKVHIRSAFIMNGVCVRWRGWIDLERLDGVGCLEYCEERAAAEDALLREQIDRYNQRLREFEDKQRVYRGQQDRAEQDLELRMSGGIHGHTHHGHHGASPVSARCHGPPRHGLPLQGRKKADLNHGHHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01058135;
- 90% Identity
- iTF_01038988; iTF_00872823;
- 80% Identity
- iTF_01038988;