Spec007799.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- Bgb
- Assembly
- GCA_951805265.1
- Location
- OX638205.1:1190416-1213879[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-86 1e-81 272.6 0.5 1 163 34 192 34 196 0.96
Sequence Information
- Coding Sequence
- ATGCATTCGATGAACGATCCTGCTTCGGCTCTGGCCGGAATGTTACCATTCGATTCGATCGGTCTCTACGAACAACCTAAACCTAGATTCATTTTCAAAATGCCGCGAGTGGTGCCGGATCAAAAGGCCAAATTTGAATCGGACGAACTCTTCAGGAGGCTCAGCCGCGAAAGCGAGGTCAGATACACGGGTTATAGGGACCGACCTCAGGAGGAGCGCCAGGTACGGTTTCAAAACGCCTGCAGGGAAGGTCACACGGAAATTGCGTTCGCGGCCACCGGCACCAATCTCCAGTTGGTCTTCACGCCACCCACCACAACTGGCTACATGGACAAAGAGTGCGACTTCGACAAGGAACCGGGAAAGgtacaCATAAAGGCGGCGTTCATCATGAACGGGGTGTGCGTGAGATGGCGCGGCTGGTTGGACTTGGAGCGTCTGGACGGCGTCGGTTGTCTGGAGTACTGCGAGGAGCGGGCGGCGGCCGAAGATGCGCTCCTGAGGGAACAAATAGAGCGCTACAATCAACGACTGAGAGAATTCGAGGACAAGCAACGGGGCTACCGACAGGACCGACCCGAGCAAGACCTCGAGATGTTCTTGCTCGCTTGCTCTGATGTTCTGAGCATCGTCCCAACACAGGAAGAGCATATGCGCGAACAATGA
- Protein Sequence
- MHSMNDPASALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKAKFESDELFRRLSRESEVRYTGYRDRPQEERQVRFQNACREGHTEIAFAATGTNLQLVFTPPTTTGYMDKECDFDKEPGKVHIKAAFIMNGVCVRWRGWLDLERLDGVGCLEYCEERAAAEDALLREQIERYNQRLREFEDKQRGYRQDRPEQDLEMFLLACSDVLSIVPTQEEHMREQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01058135;
- 90% Identity
- iTF_00920423; iTF_01058135; iTF_01058886; iTF_00639294; iTF_01479885; iTF_00870321; iTF_01311323; iTF_01277444; iTF_00841606; iTF_00929333; iTF_01366103; iTF_00049024; iTF_00083666;
- 80% Identity
- -