Basic Information

Gene Symbol
Bgb
Assembly
GCA_028455855.1
Location
JAPTHL010000048.1:7852814-7861863[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-82 7.8e-79 262.7 3.0 1 164 34 193 34 196 0.97

Sequence Information

Coding Sequence
ATGCATTCGATGATCGATCCAGCTTCAGCATTGGCCGGAATGCTACCATTTGATTCGATAGGTCTTTATGAACAACCGAAACCTAGATTTATATTTAAAATGCCAAGAGTTGTGCCAGATCAAAAGGCCAAATTTGAATCGGATGAATTGTTTAGAAGACTGAGTCGGGAAAGCGAGGTCCGATATACAGGCTACAGAGATCGGCCACAAGAGGAGCGTCAAGTACGATTTCAAAATGCCTGCCGTGAAGGACATACAGAAATTGCATTTACAACAAATGGTACAAATGTACAATTAATATTTACACCACCCACAACTGGATATCTGCCTGATAAAGAATGTGATTTTGAAAAAGAACAAGGCAAAGTCCATTTAAAAGCAACGATGATTATGAATGGTGTTTGCGTAAGATTTAAGGGCTGGCTAGATTTAGAACGATTAGATGGTGTTGGTTGTTTGGAATATAACGAGGAACGTGCAGCCCAAGAAGATGCTATACTTCGAGAACAAATCGAACGGTATAATCAAAGATTAAGAGAATTTGAAGATAAATCGAGAGGTTACAGACAACAGGAACGGGTAGATCAAGATCTTGAGGTACGAAGAAATTATATGAAACTTTACTGA
Protein Sequence
MHSMIDPASALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKAKFESDELFRRLSRESEVRYTGYRDRPQEERQVRFQNACREGHTEIAFTTNGTNVQLIFTPPTTGYLPDKECDFEKEQGKVHLKATMIMNGVCVRFKGWLDLERLDGVGCLEYNEERAAQEDAILREQIERYNQRLREFEDKSRGYRQQERVDQDLEVRRNYMKLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01058135;
90% Identity
iTF_00986897;
80% Identity
-