Basic Information

Gene Symbol
Bgb
Assembly
GCA_013387265.2
Location
JABFTP020000144.1:41098808-41139347[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-83 7.7e-79 264.9 1.5 1 164 34 192 34 195 0.97

Sequence Information

Coding Sequence
ATGCACTCAATGAATGATCCCACGTCTGCTCTGGCGGGAATGCTCCCCTTCGAGAGCATCGGATTATACGAACAGCCTAAACCTAGGTTTATCTTCAAGATGCCGAGGGTTGTACCTGACCAAAAAGCTAAATTTGAATCTGACGAATTATTTAGGAGGCTAAGCAGGGAAAGCGAGGTCAGGTATACAGGATGTCGTGATAGAGGCCAAGAAGAACGACAACAAAGATTCCAACATGGTTGTCGTGAAGGCCATACAGAAATAGCCTTTGCCGCTACTGGAACAAATTTGCAGTTAGTCTTCACACCACCAACTACAGGTTATATGCCAGATGAATGTGATTTCGAAAAAGAAGCAGGAAAAGTACACATCAAGTCTTCGTTCATAATGAATGGAGTCTGCGTCAGATGGCGTGGTTGGATCGATCTAGAGCGTCTCGACGGAGTGGGATGCCTAGAGTATAACGAAGAGCGTGCTGCTCAGGAAGATGCGTTGCTTCGCGAACAAATAGAGCGATATAATCAAAGACTGAGGGAATTCGAGGACAAACAAAGAGGGTACAGGCAACAAGATAGGCCTGACCAGGATTTGGAGGTACGTGTTGGGCCCGTGCAATCAAGAAATTACATGAAAATGTATTAG
Protein Sequence
MHSMNDPTSALAGMLPFESIGLYEQPKPRFIFKMPRVVPDQKAKFESDELFRRLSRESEVRYTGCRDRGQEERQQRFQHGCREGHTEIAFAATGTNLQLVFTPPTTGYMPDECDFEKEAGKVHIKSSFIMNGVCVRWRGWIDLERLDGVGCLEYNEERAAQEDALLREQIERYNQRLREFEDKQRGYRQQDRPDQDLEVRVGPVQSRNYMKMY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01058135;
90% Identity
iTF_00019952;
80% Identity
-