Mcer022191.1
Basic Information
- Insect
- Myzus cerasi
- Gene Symbol
- Lrrfip2
- Assembly
- None
- Location
- Mc2899:17212-23662[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-98 2.8e-93 313.1 28.5 1 300 216 534 216 534 0.92 2 2 0.01 2.9e+02 1.2 5.5 121 172 533 584 532 593 0.92
Sequence Information
- Coding Sequence
- ATGCAGAATGATAGTCATATTAAAATGAACGTAACATCGTGTGATCTGGTTACTGGAGCGCATATTACGCATGTATACATAAATCAAACTCCAGATAATTTAAACGAAAAATCATTAGATACTAAATTGCTCGTCAATGTGCCTGTTGAATATAATACATCTAATTCTACTTTTGCGCCGAAAGAGTCTTCATCTCTGTACTCTAGCACTATTAATGACTGTAGAGATGCGGCGGTAAATATCTTAAACAACGAGACTCCATATGAATATTCTAAAGTCGTTCAATCATCTCAGTTAATACTAGATACTAATGGATCATATTCTTGTCACATATGTGCTAATGATAATGCCTCCCTGAATTCAGTATGCAAGACTATTAATACTGATTCTATTCGTCCAGTACGCAATACTGATAGTAATTATACCTATCCTTCGTCAGAGGATGACGAAAGTTATTGTGGATATTCTATTGCTGATATCAGTGATATCGATGAGCTATCAGATAATATTTTAAATGATCTTCAATCTAGTCCACTTAGGGAAAAAACAAAGGTACAAATTAATGGTTCTAGTCATGGCTATAATTCCAGTGGTGATTCTGAAGCTGATGGAATTGTAACGTTTCTGGACAAGCGTAATAATGAAGCGGAAGCTCGTTTGGCTGCAAGACGTCAAGCCCGTGCCGAAGCTAGAGAAATTCGTATGCGAGAAATTGAACGGCAACAAAAAGAAGCCGAAGAAAATGCAGACAAAGCTTTTGATATGCATGCAGCAGGCAAATATTACAGTATTACACATTTACACAATCCAAAAACATTGAAATACATTGTCCTACATGGGCCTATAGCAAATCGAGTATCACGAGTAGCTGCTAGCACTGCCAGTCCTAGAGCAGCTAGTACAGTACATAATACTAACAGTTACCAATCTAGTCGACGTAATTCAGTTGATTCTCTTGATGAATCTACTCCGAACTTTCGAGATTTTAGGATGGAATTAAAAGACTTAGAAGAAAAGTTTCGAAAAGCTATGGTACAAAATGCTCAACTTGACAATGAAAAAGCAGCTGTGACATATATGGTAGAATTATATAAAGACAAGTACACCGATATTGAAGAAGAGCTTATGCATATAAAACGAGAACATAAGGAAAGTTGTAGGGAAAACGAAAAATTAAAACGTTTATTGGCTACTCAAAAACTAGAATCTATAACACTTCAACAAGAACTAGAAGAACGTGATAAACTCATTGAGGAAAAAGGACTAGTAATAATCAGCACAGAACAAGAATGTTGGAGTGAGAGTGACCAATGTAATAGTAAAATAAAACGTGCCTTAGTTTCTGTTGAAAATGCTCAATTATTACAAGATGCAGGAGAAGGTTGCTTAGATGTACGACTTAAAAAGTTTACTGAAGAACGCAACAGCTATATAGATGAAATTAACCAGCTCAAATTAGAGTTGCAAGAGGCCAAACGTCATAGTGATAACCATTACAACGGTACAGACTCAGACGATTTGGAAGATGCCCAAAAAGAAACTAATAAAGTTCTTGGTGATTATAAATTCAAGTGGCAAAAGGCTGAACAAGATATTTCTACATTACAAGCAAATGTTGCTAGGCTCGAGAGTCAAGTTATTAGATATAAAACAGCATCGGAAGCATCTGAAAAAGCTGAAGATGAACTGAAATTGGAAAAACGAAAACTACAGCGTGAGCTTCGAGAAGCTCAAGCAAAAGTTGAAGAGTTGGAAACTTCCAATATGCATTTGTTGAAACGCTTTGACAAATTAAAGAACGCCAAATCTAGTTTACTAAAAGATTTATAA
- Protein Sequence
- MQNDSHIKMNVTSCDLVTGAHITHVYINQTPDNLNEKSLDTKLLVNVPVEYNTSNSTFAPKESSSLYSSTINDCRDAAVNILNNETPYEYSKVVQSSQLILDTNGSYSCHICANDNASLNSVCKTINTDSIRPVRNTDSNYTYPSSEDDESYCGYSIADISDIDELSDNILNDLQSSPLREKTKVQINGSSHGYNSSGDSEADGIVTFLDKRNNEAEARLAARRQARAEAREIRMREIERQQKEAEENADKAFDMHAAGKYYSITHLHNPKTLKYIVLHGPIANRVSRVAASTASPRAASTVHNTNSYQSSRRNSVDSLDESTPNFRDFRMELKDLEEKFRKAMVQNAQLDNEKAAVTYMVELYKDKYTDIEEELMHIKREHKESCRENEKLKRLLATQKLESITLQQELEERDKLIEEKGLVIISTEQECWSESDQCNSKIKRALVSVENAQLLQDAGEGCLDVRLKKFTEERNSYIDEINQLKLELQEAKRHSDNHYNGTDSDDLEDAQKETNKVLGDYKFKWQKAEQDISTLQANVARLESQVIRYKTASEASEKAEDELKLEKRKLQRELREAQAKVEELETSNMHLLKRFDKLKNAKSSLLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037790;
- 90% Identity
- iTF_00940494; iTF_00019027; iTF_01032890; iTF_00184576;
- 80% Identity
- -