Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060840.1:15102806-15182129[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00094 0.11 14.7 4.1 1 23 225 247 225 247 0.97

2 11 2.9e-05 0.0035 19.5 1.5 1 23 253 275 253 275 0.98

3 11 0.00029 0.035 16.3 2.3 1 23 281 304 281 304 0.96

4 11 0.011 1.3 11.4 4.0 1 21 310 330 310 332 0.95

5 11 0.00029 0.035 16.3 1.9 1 23 338 360 338 360 0.99

6 11 3.3e-05 0.004 19.3 1.2 1 23 366 388 366 388 0.98

7 11 0.00074 0.09 15.0 1.4 1 23 396 419 396 419 0.97

8 11 0.00014 0.017 17.3 2.2 2 23 426 447 425 447 0.96

9 11 0.00022 0.027 16.7 0.6 1 23 453 475 453 475 0.98

10 11 3e-06 0.00036 22.6 2.4 1 23 481 504 481 504 0.97

11 11 4.9e-08 6e-06 28.2 0.8 1 23 518 540 518 540 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00094	0.11	14.7	4.1	1	23	225	247	225	247	0.97
2	11	2.9e-05	0.0035	19.5	1.5	1	23	253	275	253	275	0.98
3	11	0.00029	0.035	16.3	2.3	1	23	281	304	281	304	0.96
4	11	0.011	1.3	11.4	4.0	1	21	310	330	310	332	0.95
5	11	0.00029	0.035	16.3	1.9	1	23	338	360	338	360	0.99
6	11	3.3e-05	0.004	19.3	1.2	1	23	366	388	366	388	0.98
7	11	0.00074	0.09	15.0	1.4	1	23	396	419	396	419	0.97
8	11	0.00014	0.017	17.3	2.2	2	23	426	447	425	447	0.96
9	11	0.00022	0.027	16.7	0.6	1	23	453	475	453	475	0.98
10	11	3e-06	0.00036	22.6	2.4	1	23	481	504	481	504	0.97
11	11	4.9e-08	6e-06	28.2	0.8	1	23	518	540	518	540	0.97

Sequence Information

Coding Sequence: ATGGCAGGCTTAACTGCAGTTCAAATCAAAATGGAAGGACAAGAGGGCGGTGAAACTATAACAGACATCCAGAACTATCTGGAAACattcaataaagaaatacagGGTGGGGAGCAAATAGTACAGCACATCACAGaAGTACAACATGTTGTTGCCTCGGATGAAGGTGCTGAAGAAGGAACATACTTTGTGGATCAGGCTGGGCATTATTACTACCAAGCAAGTGCTGACCAACAGCCAGTTATGACAGTAGTGTCAGGAGTTGCAGATCCCTCTGCAGAAGTATTAGATACTGCTtctgaaacaacaacaacatatgtAGCAATGCAACCTCAGGAGGGTCAAGTGGAAGAAGCAATGGCATCTATAGAAACAACAGAAGATGAGGGAAATGCGGGCAATGGTGAAACAACTCCAATGATCTTAAATGCTGGTGATGCTTACCAAACAGTAACTATTGTTCCTTCAGACACAAATCCAGGCGAAGTTAGCTATGTGTTAATTGTACAACAGCCTGATGATAAAGATCACAAAGGTGATGACCAGGACCTCACTGTATATGACTTCGATGAAGGTGAAGAAGGGGGAATTGCAATGgagtCTGGAGATGAAgatgacaaaacaaaaataattaaaattttgccaAAAAAGTCTCAGACTGTTACACAAGCACACATGTGTAACTATTGCAACTACACCAGCCCGAAAAGGTATCTTTTGTCTCGTCATATGAAGTCTCATTCCGAAGAACGGCCACACAAATGCAGTGTATGTGAACGAGGCTTCAAGACGTTGGCCTCTTTACAAAATCATGTGAACACTCACACGGGTACAAAGCCACATCGCTGCAAGTTCTGTGATAGTGCATTTACTACATCAGGTGAGCTCGTAAGACATGTTCGGTACAGACATACACACGAGAAACCTCATAAATGTACAGAATGTGATTATGCGAGTGTGGAATTGAGTAAATTGAAACGTCACATGCGCTGCCACACTGGCGAGAGACCATACCAGTGTCCACACTGCACATATGCCAGTCCAGACACATTTAAGCTGAAACGGCATCTTCGAATCCATACGGGGGAGAAGCCTTATGAGTGTGACATCTGCCATGCCCGTTTCACCCAGTCAAATAGCCTTAAGGCTCATAAGCTCATCCATAGtgCTGGTGACAAACCAGTGTTCCAGTGTGAACTGTGCCCTACAACATGTGGTCGGAAGACTGACCTGCGTATCCATGTACAAAAATTGCATACTTCAGACAAACCTCTGAAATGCAAACGTTGTGGAAAATCTTTTCCAGATCGTTATACCTATAAGattcaCAATAAATCTCATGAAGGGGAGAAGTGCTTTAAATGTGATCTGTGCCCATATGCGTCCATATCACAAAGACATTTAGAATCACACATGTTAATTCATACAGACCAAAAACCATATCAGTGCGATCAGTGTGACCAGTCATTTAGACAAAAACAGCTGCTGAGAAGGCATCAAAACCTGTATCACAATCCTAATTATGTGCCCCCTCCACCTCGGGAGAAGACCCACGAATGTCCTGAATGTGGTAGAGCTTTCAGGCATAAAGGAAACCTTATCAGGCATATGGCAATACACGACCCTGAATCTTCAGCGCAGGAGAAGGCTCTGGCTTTGAAATTAGGACGGCAAAAGAAGATTCAGATTATAGATGGGCAGCAAGTAGAAGTAATGGCAGGGGAAGATGAAGATGAGGATGAGGACACTGATGGTGAGATGATGGCAGTTGATGGTCAAGATGGCCAACAGTATGTTGTCCTGGAGGTCATTCAGCTACAGGATGGTGATGGTGAGCAAGCAGTAGCTGTTGTGGCAGGTGATGGGACACATACCATGGAACAAACAGTGACAGAGCTTGCAGCAGAAAGTGATGAAGAAGGCATATTGGCTGGCCAACACATTACACCAGATAACCAACTTACAGATGAGGAGGACGACGATGACGTAATGGAAACCCTAAGAAGCAGCAGgaaaatatcaagaaaagatGCGCTGGCAATCAGAAAAAGGATAGAAACAGAAAAGGATATGCAAAACTGTTTTGGGTTTGATGATGGTGATGAGGAAGTAGATGATGAATCAGCCAAAACCACAATCCAGCTTCTTGAAGCCATGCATCAGTAA
Protein Sequence: MAGLTAVQIKMEGQEGGETITDIQNYLETFNKEIQGGEQIVQHITEVQHVVASDEGAEEGTYFVDQAGHYYYQASADQQPVMTVVSGVADPSAEVLDTASETTTTYVAMQPQEGQVEEAMASIETTEDEGNAGNGETTPMILNAGDAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDHKGDDQDLTVYDFDEGEEGGIAMESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEDEDEDEDTDGEMMAVDGQDGQQYVVLEVIQLQDGDGEQAVAVVAGDGTHTMEQTVTELAAESDEEGILAGQHITPDNQLTDEEDDDDVMETLRSSRKISRKDALAIRKRIETEKDMQNCFGFDDGDEEVDDESAKTTIQLLEAMHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00396609; iTF_01410947; iTF_01448839; iTF_01445040; iTF_01445887; iTF_00370412; iTF_00210127; iTF_01567244; iTF_00242487; iTF_00243511; iTF_00895063;
90% Identity: iTF_01410947;
80% Identity: -