Basic Information

Insect: Lordiphosa stackelbergi
Gene Symbol: -
Assembly: GCA_018904235.1
Location: JAEIFU010003013.1:11709-16237[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0034 0.15 12.4 1.1 1 23 196 218 196 218 0.96

2 25 0.038 1.7 9.1 2.9 1 23 224 246 224 246 0.95

3 25 0.066 2.9 8.4 0.8 2 23 278 299 277 299 0.96

4 25 0.0055 0.24 11.8 3.0 1 23 371 394 371 394 0.94

5 25 0.02 0.87 10.0 0.9 2 23 400 421 399 421 0.97

6 25 7 3e+02 2.0 1.2 1 19 429 447 429 449 0.95

7 25 0.17 7.3 7.1 0.3 1 23 556 579 556 579 0.93

8 25 0.0089 0.39 11.1 0.2 1 22 588 609 588 609 0.96

9 25 0.025 1.1 9.7 3.8 1 23 618 640 618 641 0.96

10 25 0.0026 0.11 12.8 0.3 2 23 672 693 671 693 0.97

11 25 5e-06 0.00022 21.3 4.2 1 23 701 723 701 723 0.99

12 25 0.19 8.1 6.9 5.9 1 23 866 889 866 889 0.96

13 25 0.053 2.3 8.7 0.3 2 21 898 917 897 918 0.92

14 25 0.021 0.91 9.9 1.5 1 23 927 950 927 950 0.96

15 25 2.3e-05 0.00099 19.3 1.6 2 23 963 984 962 984 0.96

16 25 0.00019 0.0085 16.3 1.2 1 23 991 1013 991 1013 0.98

17 25 0.3 13 6.3 0.4 3 23 1041 1062 1040 1062 0.96

18 25 0.015 0.63 10.4 4.7 1 23 1110 1133 1110 1133 0.96

19 25 0.02 0.88 10.0 1.3 1 23 1170 1193 1170 1193 0.98

20 25 0.00031 0.013 15.7 2.0 1 23 1222 1245 1222 1245 0.98

21 25 7.6e-06 0.00033 20.8 0.2 2 23 1254 1275 1253 1275 0.95

22 25 0.00031 0.013 15.7 3.1 1 23 1281 1303 1281 1303 0.99

23 25 5.8e-06 0.00025 21.1 3.9 1 23 1309 1331 1309 1331 0.98

24 25 2.6e-07 1.1e-05 25.4 2.4 1 23 1337 1359 1337 1359 0.99

25 25 0.0025 0.11 12.8 0.2 1 21 1365 1385 1365 1389 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0034	0.15	12.4	1.1	1	23	196	218	196	218	0.96
2	25	0.038	1.7	9.1	2.9	1	23	224	246	224	246	0.95
3	25	0.066	2.9	8.4	0.8	2	23	278	299	277	299	0.96
4	25	0.0055	0.24	11.8	3.0	1	23	371	394	371	394	0.94
5	25	0.02	0.87	10.0	0.9	2	23	400	421	399	421	0.97
6	25	7	3e+02	2.0	1.2	1	19	429	447	429	449	0.95
7	25	0.17	7.3	7.1	0.3	1	23	556	579	556	579	0.93
8	25	0.0089	0.39	11.1	0.2	1	22	588	609	588	609	0.96
9	25	0.025	1.1	9.7	3.8	1	23	618	640	618	641	0.96
10	25	0.0026	0.11	12.8	0.3	2	23	672	693	671	693	0.97
11	25	5e-06	0.00022	21.3	4.2	1	23	701	723	701	723	0.99
12	25	0.19	8.1	6.9	5.9	1	23	866	889	866	889	0.96
13	25	0.053	2.3	8.7	0.3	2	21	898	917	897	918	0.92
14	25	0.021	0.91	9.9	1.5	1	23	927	950	927	950	0.96
15	25	2.3e-05	0.00099	19.3	1.6	2	23	963	984	962	984	0.96
16	25	0.00019	0.0085	16.3	1.2	1	23	991	1013	991	1013	0.98
17	25	0.3	13	6.3	0.4	3	23	1041	1062	1040	1062	0.96
18	25	0.015	0.63	10.4	4.7	1	23	1110	1133	1110	1133	0.96
19	25	0.02	0.88	10.0	1.3	1	23	1170	1193	1170	1193	0.98
20	25	0.00031	0.013	15.7	2.0	1	23	1222	1245	1222	1245	0.98
21	25	7.6e-06	0.00033	20.8	0.2	2	23	1254	1275	1253	1275	0.95
22	25	0.00031	0.013	15.7	3.1	1	23	1281	1303	1281	1303	0.99
23	25	5.8e-06	0.00025	21.1	3.9	1	23	1309	1331	1309	1331	0.98
24	25	2.6e-07	1.1e-05	25.4	2.4	1	23	1337	1359	1337	1359	0.99
25	25	0.0025	0.11	12.8	0.2	1	21	1365	1385	1365	1389	0.91

Sequence Information

Coding Sequence: ATGCTGCCCACGGATATTTGCCGTACGTGTGGACAGCAAAATACAATTTTACTGCCGCTCTCCAGCTGCTTGGAAAAGCTACAGGAATTGACACAAATTCCACTGCAGGAGGAGAGCGATGATGACAATTTGCCTCAACAAGTGTGTGGCGATTGTTTGGCCAGATTGGAGAATGCCTATGCATTTGTCGAACAGGCCAGAAGAGTGAATGGCGAGCTAATGGTAAGGCTAAGGCAATGCCTGGAGGAGGCACCTATTGATTTGCCCCTGGACCAAATAAAAATGGAAATGGAGGAGGATGCGACTGTGGAAGAGAAGGCTGCCATAAAATGCCAGCCAGAGGCGTCCAGTGAGGAGAGTGCGGCAGAGGCAGGCGATTTAAATTGGACTGACGAAAATGAGGCAGAGGCTAAACCGTATCAGCTAAGACGCAGTTTACGCAAGATAAAGCCACCACTGGACAGCGAGGAGGAGCCGGAGCGGCACAGCCCAAACCACGAGGAGCAGCTGGCCCTGCCGCCCAAGCGTGGTCGTGGACGTCCTCCTCGTCTGGCCAAAAGCCTAACCCTTAATTCCGAGGGTCGTCACGCCTGTCAAGTGTGTGGCAAGTCATTCTCTTGGTTTAGAGATATGCAGCGACATGCCCGCATCCATTTTGAGGTGGCCTCCCATGTCTGTCCCACCTGTGGCAAGAGTTTTCTGCGCAAAGACAAATACCTGTTCCATTTAAGAAGCCATGAGCGACGCCAAGCCAAGTGTCAGTCATTAACACTTAGCAAGGAATGGAGATTTGCGGAGCGTTTGTATAGCTCGGGAAGACTCAAATGTTTGGAGTGCAAATTGTGTGGTTTAAACTGTGCAAAAATTCAGGAATTGAGAACACATTTGGAGAGTCATGCTCAGGCTGATACCCTGGCCCAACTCTCGCTGGAACAGGAGGTGATCAAGGAACTATACCCCAATCATCAAATAGAACAATTGCCGCAAATTAAGGAACAAATCTGTAAAGAGCTAACTCAGGGACATTTGCAGCAATTTTGTTCTGTGGTCAATTCCTTTGGCTATGAGTTGTCTTTAAGTGATTCGGATGACGAATTGGCTGAACCTAAGTATGAATGTGTAAATTGTCACTTGAAGTTCAATCGCAAATATCGTCTGATGCGCCATACCCTGGAGGAACACCCACAGACTGAGTTACGCTGTAATCTGTGTCAGATTGGTTTTGCCTGTCCCACGCTGTTAGAACAACATCAGCGTACCCATTGTCATGCCAAACTGAAACGTTATCGTTGCCGAAGTTGCCCGGGGAAATTCAGGTGGCTGGAGAACCTAGAACGACATAGCTGTGCTCAGACAGTCAGCAGGGAGTTCAAGCAAATCCTTTGCTGTCTGTGCGATGCTCAGCTACTGAGTCTGAACCAACTAAGAGAACATATACTTACGCATCGAGATGGATGCACCGGCATTGATCCTCAACACAATTCCACCTTTTTTCGTTGTTATTATCCCAAGGGCTTGGCTTGTACTAAGTCCGAGTTGATGGCACGCATAGCGGGAGACTTTGAGGCCCAGGATTATGGACGCTATTACAATGCCTGCTCTGGCAGTGGCCAGGAAATTGATCTCTTTGACTCGGATTCGGAAGACAGTGAAAAGAAGACCCAACACATTTGCTCCTTGTGTGGTGAGATGACCAATAGACTGCTTAAACTATTGGAGCATCAGCAAGCAGCTCACTCTCAGGAGGACGTTCCATTGCCCTACACTTGTGAGGATTGTAGCAGGGGTTTTGTCTCGGATTTGCTGCTGCAACAGCACAGACGTCGCAATTGTAACAAAAGACATGCAAAATATCAATGCCAGCTGTGCCAGCAGCATTTCGTGTGGCAGGTGAACTATGAGCAGCATCAAAGAGTGCATCATCAGGAACAGCAGCAGGCAGAGCAGGAACCAAAGCCTGAGCCCGAGGAGGGTGAGCTGACTAACAAAGAGAAAAACTCCTCCAACAAACTGCAGTGCGATGAGTGTGAAAAGGTTTTTATTTGGGTCAAGGATCTTAATCGTCACAAGCGCATGCATCTGCCCCAGACGGCCGCCCAATACGAGTGTCCGCACTGTGATCGCAAATTCCATCGCAAAGATGGCCTCAAATCCCACCTAAGGATACATAGCGATCAGCAGCCACAGCAGCTAGAGTTGGAGAAGAATGAGGAATACCCTACCTCAGCTCAGCCTTCCGTGGCACTAACTCAACTGGGCCGTCCACATGGTTGCAAGCAAATCCAATGCATGATCTGTCTGTCGCAACACTCCAAAATAAGGGATCTGCGTAGTCATCTCACTTCTCATCAGTTTGGAGTAAACTTGCCACCCGAAAAAGAACCCACCAGCATCAGTCGCTCTTTATATGCCGAATTGAGTGCTCCTTTGGCCAGAGATCAACTCATTGAGCGAATCAAAGTTGATGTGGCCAAGGGTTTGGAGCTTGACCGTTTTATTTCCATTACCAATGAGGCGGGTGTAGAGCTCAGCCTGGAGAGCAGTGAAACTGAAACGGATTCCGAGGAGGAGACCAAAGCTGATCAACAGGAAGCATATGAATGCAATCTCTGCCATTTGAAAATGAAGCGAAAATATCAATTGTATCACCATCAGATGGAGCAGCATGGCTGGCCGGAAGAGGGTTCCAGTGTTTGTCCACACTGTCAGGCCCGGTTTGTAAGTGATCTGCTGCTGGAGCATCATCTGAGAAGCTTGTGCCGGAATACACACAAGCGCTTTCAGTGCCGCAAGTGTCCTTTACGCTTTCGCTGGCGGGAAAATCTCAAATTGCACACAAATCTCTCACATCAGCCCCGGGAAACGGGCGAGGAGGCGGCCGAGTTGAGTTGCCAGCAGTGCAATCGTAGCTTTAAAATGCAAAAGGATCTCACTCGTCACATACTCATGCATGGCCAGGATTCCAGTATCTATCGTTGTCGCTGGTGTGCACGTCGTTTCTACCGCAAAGCCAATCTGCTGCAGCATATCGAACGTCATGGCATAGCAAAAAATCAACTGCCCTATGCCGAAGCCTTGCTGAATGCCTATGGCCAGGCTAATGGCTCGAAAGTGATCCTCTGCAAGGTGTGTGAGATGAGTTGTGTTAGCATACAAGCTCTGCGCGTCCATTTGGCCAGTAATCATCAGTTGACCCTGGATTTGGTGACCCAGCAAAATTATTCCATTACCAATCAAGCGGGTTATGAACTGCACCTCGAAGACTCGGAAACGGATGAGGCGGAGGGAGCTGTAGAAGTCATCAAAGCGGAGGGTTCACCCGCCAGCTACACCTGCAGCATGTGTCAATTAAGATGTGTGCGTAAATATGAACTCCATCAGCATCAACAGGCCATGCATCGTGTGGAAAAGGTTCCTCAGGGTTGTGATCAGTGCATTTTTAAGAGCGTTTCCTCTGATCTTATAGCCCATCATAAGCGGGTGCAGTGTGGCAATCAGGAGAAGCAATTCAAATGCGTCAAATGCTCCTACAAATTCATGTGGGAATCCAATCTGTTGCTACACATGCAAACGCAGCATGGTAAAAGCGAGGAGGAAGAACAGCCACCGACAGCGCAAACAGCTACCAGCCAGGAAGATGCCAAAATAGAATCTCAGCAAATATTCCAGTGCGCCCAGTGTCCGCGCAAATACAATCGCAAGGATCGCCTCACAGCGCACTTGAAGAAATTCCATAATCCTGCCTTGCCCAAACGTTTTCTTTGTGCGTTCTGTGGCAAAGCCGTCAGCTCATCCTCGAATCTCATTATACACATGCGACGCCATACCGGAGAGAAGCCATTCAAGTGTGATTTCTGTGACATGGCCTTCCCACGATCCTCGGATCTTCAGTGTCATCGTCGCACCCACACCGGCGAACGTCCGCATGTGTGCACCGTCTGTCACAAGGGTTTCGCGCGTTCCTACAAACTGCAGCAACATATGCGCATCCACAATGGCGAACGACCCTACAAGTGTACCTACTGCGAGAAGAGCTTCACCCAATCCAATGATTTGACCCTACACATACGCCGCCACACGGGCGAGCGTCCATATCAGTGTGGGACTTGTGGCGAGCGTTTTATTCAGGGCACTGCCTTAAAGAATCATCGCCTGCAGCAGGGTCACTATGAGGAGGGTAGCCTGGGTGCCGGAGATCCGCCACCGAGACGAACAGTTCTTGAGCAGTTTAAAGGGGAGTGA
Protein Sequence: MLPTDICRTCGQQNTILLPLSSCLEKLQELTQIPLQEESDDDNLPQQVCGDCLARLENAYAFVEQARRVNGELMVRLRQCLEEAPIDLPLDQIKMEMEEDATVEEKAAIKCQPEASSEESAAEAGDLNWTDENEAEAKPYQLRRSLRKIKPPLDSEEEPERHSPNHEEQLALPPKRGRGRPPRLAKSLTLNSEGRHACQVCGKSFSWFRDMQRHARIHFEVASHVCPTCGKSFLRKDKYLFHLRSHERRQAKCQSLTLSKEWRFAERLYSSGRLKCLECKLCGLNCAKIQELRTHLESHAQADTLAQLSLEQEVIKELYPNHQIEQLPQIKEQICKELTQGHLQQFCSVVNSFGYELSLSDSDDELAEPKYECVNCHLKFNRKYRLMRHTLEEHPQTELRCNLCQIGFACPTLLEQHQRTHCHAKLKRYRCRSCPGKFRWLENLERHSCAQTVSREFKQILCCLCDAQLLSLNQLREHILTHRDGCTGIDPQHNSTFFRCYYPKGLACTKSELMARIAGDFEAQDYGRYYNACSGSGQEIDLFDSDSEDSEKKTQHICSLCGEMTNRLLKLLEHQQAAHSQEDVPLPYTCEDCSRGFVSDLLLQQHRRRNCNKRHAKYQCQLCQQHFVWQVNYEQHQRVHHQEQQQAEQEPKPEPEEGELTNKEKNSSNKLQCDECEKVFIWVKDLNRHKRMHLPQTAAQYECPHCDRKFHRKDGLKSHLRIHSDQQPQQLELEKNEEYPTSAQPSVALTQLGRPHGCKQIQCMICLSQHSKIRDLRSHLTSHQFGVNLPPEKEPTSISRSLYAELSAPLARDQLIERIKVDVAKGLELDRFISITNEAGVELSLESSETETDSEEETKADQQEAYECNLCHLKMKRKYQLYHHQMEQHGWPEEGSSVCPHCQARFVSDLLLEHHLRSLCRNTHKRFQCRKCPLRFRWRENLKLHTNLSHQPRETGEEAAELSCQQCNRSFKMQKDLTRHILMHGQDSSIYRCRWCARRFYRKANLLQHIERHGIAKNQLPYAEALLNAYGQANGSKVILCKVCEMSCVSIQALRVHLASNHQLTLDLVTQQNYSITNQAGYELHLEDSETDEAEGAVEVIKAEGSPASYTCSMCQLRCVRKYELHQHQQAMHRVEKVPQGCDQCIFKSVSSDLIAHHKRVQCGNQEKQFKCVKCSYKFMWESNLLLHMQTQHGKSEEEEQPPTAQTATSQEDAKIESQQIFQCAQCPRKYNRKDRLTAHLKKFHNPALPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGERPHVCTVCHKGFARSYKLQQHMRIHNGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGTCGERFIQGTALKNHRLQQGHYEEGSLGAGDPPPRRTVLEQFKGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00915514; iTF_00916421; iTF_00914665; iTF_00917379; iTF_00919242; iTF_00918350;
90% Identity: iTF_00918350; iTF_00915514;
80% Identity: -