Basic Information

Insect: Lordiphosa magnipectinata
Gene Symbol: -
Assembly: GCA_018904285.1
Location: JBAMBO010002834.1:80661-85224[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0038 0.28 12.4 1.1 1 23 197 219 197 219 0.96

2 25 0.018 1.4 10.2 3.3 1 23 225 247 225 247 0.97

3 25 0.069 5.2 8.4 0.8 2 23 279 300 278 300 0.96

4 25 0.0066 0.49 11.6 4.2 1 23 372 395 372 395 0.94

5 25 3.7 2.8e+02 3.0 3.9 2 23 401 424 400 424 0.92

6 25 1.2 86 4.6 1.9 3 23 463 483 461 483 0.95

7 25 0.092 6.9 8.0 0.3 1 23 558 581 558 581 0.94

8 25 0.0098 0.73 11.1 0.2 1 22 590 611 590 611 0.96

9 25 0.041 3.1 9.1 4.6 1 23 620 642 620 643 0.96

10 25 0.0029 0.22 12.7 0.3 2 23 674 695 673 695 0.97

11 25 4e-06 0.0003 21.7 5.1 1 23 703 725 703 725 0.99

12 25 0.066 5 8.5 3.8 1 23 869 892 869 892 0.96

13 25 0.058 4.4 8.6 0.3 2 21 901 920 900 921 0.92

14 25 0.078 5.8 8.2 2.2 1 23 930 953 930 953 0.95

15 25 2.5e-05 0.0019 19.2 1.6 2 23 966 987 965 987 0.96

16 25 0.00021 0.016 16.3 1.2 1 23 994 1016 994 1016 0.98

17 25 0.66 49 5.3 2.0 3 23 1044 1065 1043 1065 0.96

18 25 0.016 1.2 10.4 4.7 1 23 1113 1136 1113 1136 0.96

19 25 1 75 4.7 0.8 1 23 1173 1196 1173 1196 0.95

20 25 0.00034 0.025 15.7 2.0 1 23 1228 1251 1228 1251 0.98

21 25 8.3e-06 0.00062 20.7 0.2 2 23 1282 1303 1281 1303 0.95

22 25 0.00034 0.025 15.7 3.1 1 23 1309 1331 1309 1331 0.99

23 25 6.4e-06 0.00048 21.1 3.9 1 23 1337 1359 1337 1359 0.98

24 25 2.9e-07 2.2e-05 25.3 2.4 1 23 1365 1387 1365 1387 0.99

25 25 0.0028 0.21 12.8 0.2 1 21 1393 1413 1393 1417 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0038	0.28	12.4	1.1	1	23	197	219	197	219	0.96
2	25	0.018	1.4	10.2	3.3	1	23	225	247	225	247	0.97
3	25	0.069	5.2	8.4	0.8	2	23	279	300	278	300	0.96
4	25	0.0066	0.49	11.6	4.2	1	23	372	395	372	395	0.94
5	25	3.7	2.8e+02	3.0	3.9	2	23	401	424	400	424	0.92
6	25	1.2	86	4.6	1.9	3	23	463	483	461	483	0.95
7	25	0.092	6.9	8.0	0.3	1	23	558	581	558	581	0.94
8	25	0.0098	0.73	11.1	0.2	1	22	590	611	590	611	0.96
9	25	0.041	3.1	9.1	4.6	1	23	620	642	620	643	0.96
10	25	0.0029	0.22	12.7	0.3	2	23	674	695	673	695	0.97
11	25	4e-06	0.0003	21.7	5.1	1	23	703	725	703	725	0.99
12	25	0.066	5	8.5	3.8	1	23	869	892	869	892	0.96
13	25	0.058	4.4	8.6	0.3	2	21	901	920	900	921	0.92
14	25	0.078	5.8	8.2	2.2	1	23	930	953	930	953	0.95
15	25	2.5e-05	0.0019	19.2	1.6	2	23	966	987	965	987	0.96
16	25	0.00021	0.016	16.3	1.2	1	23	994	1016	994	1016	0.98
17	25	0.66	49	5.3	2.0	3	23	1044	1065	1043	1065	0.96
18	25	0.016	1.2	10.4	4.7	1	23	1113	1136	1113	1136	0.96
19	25	1	75	4.7	0.8	1	23	1173	1196	1173	1196	0.95
20	25	0.00034	0.025	15.7	2.0	1	23	1228	1251	1228	1251	0.98
21	25	8.3e-06	0.00062	20.7	0.2	2	23	1282	1303	1281	1303	0.95
22	25	0.00034	0.025	15.7	3.1	1	23	1309	1331	1309	1331	0.99
23	25	6.4e-06	0.00048	21.1	3.9	1	23	1337	1359	1337	1359	0.98
24	25	2.9e-07	2.2e-05	25.3	2.4	1	23	1365	1387	1365	1387	0.99
25	25	0.0028	0.21	12.8	0.2	1	21	1393	1413	1393	1417	0.91

Sequence Information

Coding Sequence: atgctgCCCACGGATATTTGCCGTACTTGTGGACAGCAAAACACAATATTACTGCCGCTGTCCAGCTGCTTGGAAAAGCTACAGGAATTGACACAAATTCCGCTGCAGGAGGAGAGCGATGATGATAATTTGCCTCAACAAGTGTGTGGCGATTGTTTGGCCAGATTGGAGAATGCCTATGCATTTGTCGAGCAGGCAAGAAGAGTGAATGGCGAGCTAATGGTAAGGCTAAGGCAATGCCTGGAGGAGGCACCTATTGATTTGCCTCTGGATCAaataaaaatggaaatggaGGAGGATGCGACTGTGGAAGAGAAGACTGAGATAAAATGCCAGCCGGAGGCGTCCAGTGAGGAGAGTGAGGCAGAGGCAGGCGATTTAAATTGGACTGACGAAAATGAGGCAGATGCTAAACCGTATCAGCTAAGACGCAGTCTGCGCAAGATAAAGCCACCATTGGACAGCGAGGAGGAGGAGCCGGAGCGGCACAGCCCAACCCACGAGGAGCAGCTGTCTCTGCCGCCCAAGCGTGGTCGTGGACGTCCTCCTCGAGTGGCCAAAAGCCTTACCCTTAATTCCGAGGGTCGTCACGCCTGTCAAGTGTGTGGCAAGTCGTTCTCTTGGTTTAGAGATATGCAGCGACATGCCCGCATACATTTTGAGGTGGCCTCCCATGTCTGTCCCACCTGTGGCAAGAGTTTTCTGCGCAAGGATAAATACCAGTTCCATTTAAGAAGCCATGAGCGACGCCAAGCCAAGTGTCAATCATTGACACTTAGCATGGAATGGAGATTTGCGGAACGTTTGTATAGCTCGGGCAGACTGAAATGCTTGGAGTGCAAATTGTGTGGTTTAAATTGTGCAAAAATTCAGGAATTGAAAACACATTTAGAGAGTCATGCTCAGGCGGAAACCCTGGCTCAACTCTCCCTGGAACAGGAGGTGATCAAGGAACTATATCCCAATCAGCAAATAGAACAATTGCCGCAAATTAAGGAACAAATATGTAAAGAGCTCACTGAGGGACATTTGCAGCAATTTTGTTCTGTGGTCAATTCCTTTGGCTATGAGTTGTCTCTAAGTGATTCGGATGACGAATTGGCTGAACCTAAGTATGAATGTGTGAGGTGTCATTTAAACTTCAAGCGCAAACATCTGCTCATGCGCCATACCCTGGAGGAACATACACAAACTGAGTTACGCTGTAATCTCTGCCAGATTGGCTTTGTATGTCCCAAGCTCTTTGAACAACATCAGCGTACCCAATGTCATTCCAAAATGAAACGCTATCGTTGCCGAAATTGCCCGGGGAAATTCATGTGGCTGGAGAACCTAGAACGACATAACTGTGCCCAGTTGGGTAGCAAAGAGTCCAAGCAAATCCATTGCTGTCTCTGCGATGCTCAGTTACCGAATCTGAACCAACTGAAAGAACACATATTTACTCATAGGGATGGTTGCACCGGCATTGATCCTCAACACAATTCCACCTTCTTTCGTTGCTATTACCCCAAGGGCTTGGCTTGTACTGAGGCCGAGTTAATTGCTCGCATAGCGGGTGACTTTGAGGCTCAAGATTATGGTCGCTATTACAATGCCTGCTCGGGCAGTGGCCAGGAAATGAATCTCTTTGACTCGGACTCGGATGACAGTGAGATGAAGACGACCCAACACATTTGCTCCCTGTGTGGAGAGATAACCAATAGATTGTTTAAACTTTTGGAACATCAGCAAGCAGCTCACTCTCAGGAGGATGTGCCTTTGCCCTACACTTGTGAGGATTGTAGCCGGGGTTTTGTATCGGATTTGCTGCTGCAACAGCACAGACGTCGCAATTGTAACAAAAGACATGCAAAATATCAATGCCAGCTGTGCCAGCAGCATTTCGTGTGGCAGCAGAACTATGAGCAGCATCAAAGAGTGCACCATCAGcaggaacagcagcagcaagaaCCAAAGGCTGAGCCAGAGGAGAGTGAGCTGCTGACTAACAAACAGAAAAACTCCGCCAACAAACTGCAGTGCGATGAGTGCGAAAAGgtcttTATCTGGGTCAAGGATCTTAATCGTCACAAGCGCATGCATCTACCCCAGACGGCAGCCCAGTACGAATGTCCGCACTGTGATCGCAAATTCCATCGCAAAGATGGCCTCAAATCCCATCTAAGAACACATagcgatcagcatcaacagcagctaGAATTAGAGAAGAATGAAGAATACTCTACGCCAGCTCAGACTCCCGTGGCACTTCCTCAACTGGGCCGTCCACATGGTTGCAAGCAAATCCAATGCATGATCTGTCTGTCGCAGCACTCCAAAATAAGGGATCTGCGTAGTCATCTCAGTTCTCATCAGTTTGCAGTAAACCTGCCACATGAAAAAGATCCCACTTGCATCAGTCGCTCTTTATATGCCGAATTGAGTGCTCCTTTGGCCAGAGATCAACTAATTGAGCGTATCAAAGTTGATGTGGCCAAGGGTTTGGAGCTGGACCGATTTATATCCATTACCAATGAGGCTGGCATAGAGCTCAGCTTGGAAAGCAGCGAAACTGAAACGGATTCCGAGGAAGAGACCAAAGCTGATGCTGAAGAGGAAGCATACGAATGCAATCTTTGCCATTTGAAGATGAAGCGAAAATATCAATTGTATCAACATCAGATGGAGCAACATGGCTGGCCGGAAGAGGGTTCCAGTGTTTGTCCACACTGTCAAGCCCGTTTTGTGAGTGATCTGCTGCTGGAGCATCATCTGCGCAGCTTGTGCCGGAATACCCACAAGCGTTTCCAGTGTCGCAAATGTTCGTTACGCTTCCGCTGGCGGGAGAACCTCAAATTGCATACTAATCTTTCACATCAGCCCCCAGAAACGGGCGAGGAGGCGCCCGAATTGAGCTGCCAACAGTGCAATCGTAGCTTTAAAATGCAAAAGGATCTCACTCGTCACATACTCATGCATGGCCAGGAGTCGAGTATCTATCGTTGTCGCTGGTGTGCACGTCGTTTCTACCGCAAAGCCAATCTGTTGCAACATATAGAACGTCATGGCATAGCAGCCAATCAGCTGCCCTATGCCGAGGCTTTGCTTAATGCCTATGGCCAGGCCAATGGACCGAAAGTGATCCTGTGCAAGGTGTGTGAGATGAGCTGTGACAGCATACAAGCTCTGCGTCACCATTTGGCCAAAGATCATCAGTTGTCCCTAGAATTGGTCACCCAGCTGAATTATTCCATTACCAATCAAGCGGGCTATGAACTGCATCTCGAGGACTCGGAAACGGATGAGGCGGAGGGTGTTGCAGAAGTGCTCAAAGCGGAGGGTACACCCGCCAGCTACACCTGCAGCATGTGTCAATTGAGATGTGTGCGGAAATATGAACTCCATCAGCATCAGCAGGCCATGCATCGTGTGGAAAAAGTCCCTCAGGGTTGTGATCAGTGCATTTTTAAGAGCGTTTCCGCGGATCTCATAGCCCATCATAAGCGGGTGCAGTGCGACAATCCGGAGAAGCAATTCAAATGCATCAAATGCTCCTACAAATTTATGTGGGAATCCAATCTGTTGCTACACATGCAAGTTCAGCATGGTAAAACCGAAGAGGAAGAACAGCCAGCGCCAGCGCAAACAACTACCAGCCAGGAAGATGGCAAAATAGaaaatcagcagcagcagcaaatctTCCAGTGTGCCCAGTGTCCGCGCAAATACAATCGCAAGGATCGCCTCACAGCGCATTTGAAGAAATTTCATAATCCTGCTTTGGTCAACAACGTTATACAGTCCACCCCAGCTTCCACTGTGCCCACTTCCGCCTTACCAGCCAAACAGCCCAAACGTTTTCTTTGTGCATTCTGTGGCAAAGCCGTCAGCTCATCCTCCAATCTTATTATACACATGCGACGCCACACCGGAGAGAAGCCATTCAAGTGTGATTTCTGTGACATGGCCTTCCCACGATCCTCGGATCTTCAGTGTCATCGTCGCACCCATACCGGCGAACGTCCGCATGTGTGCACCGTCTGTCACAAGGGTTTCGCACGTTCCTACAAACTGCAGCAACATATGCGCATTCACAATGGCGAACGACCCTACAAGTGTACCTACTGTGAAAAGAGTTTCACCCAATCCAATGATTTGACCCTACACATACGACGCCACACGGGCGAACGTCCATATCAGTGTGGAACTTGTGGCGAGCGTTTCATTCAAGGCACTGCCTTGAAGAATCATCGCCTGCAGCAGGGCCACTATGAGGAGGGCAGCCAGGGTGCCGGAGACCCGCCACCAAGACGCACAGTTCTTGAGCAATTTAAAGGGGAGTGA
Protein Sequence: MLPTDICRTCGQQNTILLPLSSCLEKLQELTQIPLQEESDDDNLPQQVCGDCLARLENAYAFVEQARRVNGELMVRLRQCLEEAPIDLPLDQIKMEMEEDATVEEKTEIKCQPEASSEESEAEAGDLNWTDENEADAKPYQLRRSLRKIKPPLDSEEEEPERHSPTHEEQLSLPPKRGRGRPPRVAKSLTLNSEGRHACQVCGKSFSWFRDMQRHARIHFEVASHVCPTCGKSFLRKDKYQFHLRSHERRQAKCQSLTLSMEWRFAERLYSSGRLKCLECKLCGLNCAKIQELKTHLESHAQAETLAQLSLEQEVIKELYPNQQIEQLPQIKEQICKELTEGHLQQFCSVVNSFGYELSLSDSDDELAEPKYECVRCHLNFKRKHLLMRHTLEEHTQTELRCNLCQIGFVCPKLFEQHQRTQCHSKMKRYRCRNCPGKFMWLENLERHNCAQLGSKESKQIHCCLCDAQLPNLNQLKEHIFTHRDGCTGIDPQHNSTFFRCYYPKGLACTEAELIARIAGDFEAQDYGRYYNACSGSGQEMNLFDSDSDDSEMKTTQHICSLCGEITNRLFKLLEHQQAAHSQEDVPLPYTCEDCSRGFVSDLLLQQHRRRNCNKRHAKYQCQLCQQHFVWQQNYEQHQRVHHQQEQQQQEPKAEPEESELLTNKQKNSANKLQCDECEKVFIWVKDLNRHKRMHLPQTAAQYECPHCDRKFHRKDGLKSHLRTHSDQHQQQLELEKNEEYSTPAQTPVALPQLGRPHGCKQIQCMICLSQHSKIRDLRSHLSSHQFAVNLPHEKDPTCISRSLYAELSAPLARDQLIERIKVDVAKGLELDRFISITNEAGIELSLESSETETDSEEETKADAEEEAYECNLCHLKMKRKYQLYQHQMEQHGWPEEGSSVCPHCQARFVSDLLLEHHLRSLCRNTHKRFQCRKCSLRFRWRENLKLHTNLSHQPPETGEEAPELSCQQCNRSFKMQKDLTRHILMHGQESSIYRCRWCARRFYRKANLLQHIERHGIAANQLPYAEALLNAYGQANGPKVILCKVCEMSCDSIQALRHHLAKDHQLSLELVTQLNYSITNQAGYELHLEDSETDEAEGVAEVLKAEGTPASYTCSMCQLRCVRKYELHQHQQAMHRVEKVPQGCDQCIFKSVSADLIAHHKRVQCDNPEKQFKCIKCSYKFMWESNLLLHMQVQHGKTEEEEQPAPAQTTTSQEDGKIENQQQQQIFQCAQCPRKYNRKDRLTAHLKKFHNPALVNNVIQSTPASTVPTSALPAKQPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGERPHVCTVCHKGFARSYKLQQHMRIHNGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGTCGERFIQGTALKNHRLQQGHYEEGSQGAGDPPPRRTVLEQFKGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00919976;
90% Identity: iTF_00919976;
80% Identity: -