Basic Information

Insect: Lordiphosa fenestrarum
Gene Symbol: -
Assembly: GCA_035044985.1
Location: JAWNNO010004570.1:78319-82933[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0036 0.23 12.4 1.1 1 23 201 223 201 223 0.96

2 26 0.06 3.8 8.5 3.3 1 23 229 251 229 251 0.97

3 26 0.16 9.9 7.2 0.5 2 23 284 305 283 305 0.94

4 26 0.0027 0.17 12.7 2.1 1 23 378 401 378 401 0.94

5 26 8.3 5.3e+02 1.8 5.4 1 23 411 435 411 435 0.93

6 26 7.7 4.9e+02 1.9 0.6 1 19 441 459 441 462 0.91

7 26 0.0037 0.24 12.3 0.6 2 23 473 494 472 494 0.96

8 26 0.023 1.5 9.8 0.9 1 23 570 593 570 593 0.94

9 26 0.12 7.7 7.5 0.1 1 22 602 623 602 623 0.96

10 26 0.014 0.88 10.5 3.6 1 23 632 654 632 655 0.96

11 26 0.007 0.45 11.4 0.3 2 23 686 707 685 707 0.96

12 26 1.8e-05 0.0011 19.6 4.1 1 23 715 737 715 737 0.99

13 26 0.33 21 6.2 3.4 1 23 885 908 885 908 0.96

14 26 0.055 3.5 8.6 0.3 2 21 918 937 917 938 0.92

15 26 0.022 1.4 9.9 1.5 1 23 947 970 947 970 0.96

16 26 2.4e-05 0.0015 19.2 1.6 2 23 983 1004 982 1004 0.96

17 26 0.00019 0.012 16.4 0.9 1 23 1011 1033 1011 1033 0.98

18 26 0.27 17 6.5 0.2 3 23 1061 1082 1060 1082 0.94

19 26 0.015 0.97 10.4 4.7 1 23 1130 1153 1130 1153 0.96

20 26 0.039 2.5 9.1 0.8 1 23 1190 1213 1190 1213 0.97

21 26 9e-05 0.0058 17.4 2.1 1 23 1241 1264 1241 1264 0.98

22 26 7.8e-06 0.0005 20.7 0.2 2 23 1294 1315 1293 1315 0.95

23 26 0.00032 0.02 15.7 3.1 1 23 1321 1343 1321 1343 0.99

24 26 6e-06 0.00038 21.1 3.9 1 23 1349 1371 1349 1371 0.98

25 26 2.7e-07 1.7e-05 25.3 2.4 1 23 1377 1399 1377 1399 0.99

26 26 0.0026 0.17 12.8 0.2 1 21 1405 1425 1405 1429 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0036	0.23	12.4	1.1	1	23	201	223	201	223	0.96
2	26	0.06	3.8	8.5	3.3	1	23	229	251	229	251	0.97
3	26	0.16	9.9	7.2	0.5	2	23	284	305	283	305	0.94
4	26	0.0027	0.17	12.7	2.1	1	23	378	401	378	401	0.94
5	26	8.3	5.3e+02	1.8	5.4	1	23	411	435	411	435	0.93
6	26	7.7	4.9e+02	1.9	0.6	1	19	441	459	441	462	0.91
7	26	0.0037	0.24	12.3	0.6	2	23	473	494	472	494	0.96
8	26	0.023	1.5	9.8	0.9	1	23	570	593	570	593	0.94
9	26	0.12	7.7	7.5	0.1	1	22	602	623	602	623	0.96
10	26	0.014	0.88	10.5	3.6	1	23	632	654	632	655	0.96
11	26	0.007	0.45	11.4	0.3	2	23	686	707	685	707	0.96
12	26	1.8e-05	0.0011	19.6	4.1	1	23	715	737	715	737	0.99
13	26	0.33	21	6.2	3.4	1	23	885	908	885	908	0.96
14	26	0.055	3.5	8.6	0.3	2	21	918	937	917	938	0.92
15	26	0.022	1.4	9.9	1.5	1	23	947	970	947	970	0.96
16	26	2.4e-05	0.0015	19.2	1.6	2	23	983	1004	982	1004	0.96
17	26	0.00019	0.012	16.4	0.9	1	23	1011	1033	1011	1033	0.98
18	26	0.27	17	6.5	0.2	3	23	1061	1082	1060	1082	0.94
19	26	0.015	0.97	10.4	4.7	1	23	1130	1153	1130	1153	0.96
20	26	0.039	2.5	9.1	0.8	1	23	1190	1213	1190	1213	0.97
21	26	9e-05	0.0058	17.4	2.1	1	23	1241	1264	1241	1264	0.98
22	26	7.8e-06	0.0005	20.7	0.2	2	23	1294	1315	1293	1315	0.95
23	26	0.00032	0.02	15.7	3.1	1	23	1321	1343	1321	1343	0.99
24	26	6e-06	0.00038	21.1	3.9	1	23	1349	1371	1349	1371	0.98
25	26	2.7e-07	1.7e-05	25.3	2.4	1	23	1377	1399	1377	1399	0.99
26	26	0.0026	0.17	12.8	0.2	1	21	1405	1425	1405	1429	0.91

Sequence Information

Coding Sequence: atgctGCCCACGGATATTTGCCGTACGTGTGGacagcaaaatgcaaatttgttgCCGCTCTCCAGCTGCTTGGAGAAGCTACAGGAATTGACACAAATTCCGCTGCAGGAGGAGAGCGAGGATGATAACTTGCCTCAACAAGTGTGTGGCGATTGCTTGGGCAGATTGGAGAATGCCTACGCCTTTGTTGAGCAGGCTAGAAAGGTGAATGGCGAGCTGATGGTAAGGTTAAGACAATGCCTGGAGGAGGCACCCATTGATTTACCACTGGAGCAaatcaaaatggaaatggaggAGCCTGAGCATGAGGCAGAGAAGGCACATGAGTCGGATGATGCCATAAAATGGCAGCCGGACGTGTCGAGTGAGGAAAGTGAGGCAGAGGCAGGCGATTTAAATTGGACCGAAGAAAATGAGGTAGATGCCAAACCGTATCAGCTAAGAAGAAGTCTACGCAAGATAAAGCCACCACTAGACAGCGAAGAGGAGCCGGAGCGGCAGAGTTCAAACCAAGAGGAGCCGTTGACTCTGCCGCCCAAGCGTGGCCGTGGACGTCCTCCTCGTCTGGCCAAAACCCTTACCCTCAATTCCGAGGGTCGTCACGCCTGTCAAGTCTGTGGCAAGTCCTTCTCTTGGTTTCGAGATATGCAGCGACATGCACGCATACATTTTGAGGTAGCCTCCCATGTCTGTCCCAGCTGTGGCAAGACTTTTCTGCGAAAGGACAAATACCAGTTCCATTTACGCAGCCATGAGCGACGCCAAACCAAATGTCAGTCAACGACAACTCTCAGCAAGGAATGGAGATTTGCGGAGCGTTTGTACAGCTCGGCAGCTCTCAAATGTTTGGAGTGCAAATTGTGTGGCTTAAATTGTGCAAAAATCCAGGAATTGCGAACACATTTGGAGGGTCATGCACAGAAGGAAACCCTGAGCCAACTCTCGCTGGAAAAGGAGGTGATCAAAGAACTTTATCCCAATCATCAATTGGAACAGTTGCCACAAATCAAGGAACATATCTGCAAAGAACTATCAGAGGGACATCTGCAGCAATTTTGTGCTGTGGTCAATGCCTTTGGCTATGAGTTATCTTTGAGTGATTCGGATGATGAGTTGTTGGCTGAATCTCAGTATGAATGTGTAACCTGCCAATTGAACTTTAAACGCAAACATCTTCTGTTAAGACATACGCTGGAGGAGCACACTGAAACTAATGCGGTGCCGCCACAATTCCGCTGCAATCTCTGCCAGATAGGTTTTGTGTGTCCCAGGTTCTTTGAGCAGCACCAGCGTACACAATGTCATTCCAAAATGAAACGTTATCGTTGCCGCAATTGCCCGGGCAAGTTCATGTGGCTGGAGAATCTGGAGAGACACAGTTGTGTACAGTCCCAGCTGACGTCTCTGAAGCAGTTGCAGTGCTGCCTCTGCGATAAGCAGTTACCTAGTCTGAGCCAACTAAGAGCTCATTTGATGGGTCATCGGGATGGCAGCACCGGCATAGATCCTCAGCAAAAGGCCAGCTTCTTTCGTAGCTATTACCCCAAGGGTTTGGCTTGTACTCAGGCCGAGTTAATGGCACGCATAGCGGGTGACTTTGAGGCCCAGGATTATGGACGCTATTACAATGCCTGCTCTGGCAGTGGCCAGGAAATGGATCTCTTTGACTCGGATACGGACACGGCTGACAGAGACAAGAAGTTACAACACATTTGCTCCTTGTGTGGTGAGATAACCCACCGATTAAGCCAGCTTTTAGAACATCAGCAGCTGGCGCACTCTCAGGAGGACATACCATTGCCCTACTCGTGTGAGGATTGTGCCAAGGGTTATGTCTCGGATTTGCTGCTGCAACAGCATAGACGTCGTAACTGTGGCAAGAGACATGCCAAATATCAATGCCAGCTATGCCAGCAGCATTTCGTGTGGCAGGCAAACTATGAGCAGCATCAAAGAGTGCATCATCAGGAGGTGGCCGAGCAGGCCGATCAAAAGAATGAGCCAGCGGAGGAGGGTGAGCTGACCAGCAAGCGGAAAAACTCTGCCACCAAACTGCAGTGCGATGAGTGTGAAAAGGTTTTCATCTGGGTCAAGGATCTTAATCGTCACAAGCGCTTGCATCTGCCACAGACGGCAGCCCAATATGAGTGTCCGCACTGTGAACGCAAGTTCCATCGCAAAGATGGCCTCAAATCTCACCTACGCATACACAGcgatcagcagcagcagcaacagcaagaaCTGGAGAAGACTGAAGATTACTCCACGCCTGCTCAATCTTCTATGGCCCTGCCACAACTGGGTCGTGCACATGGTTGCAAGCAAATCCAATGCATGATCTGTCTGTCGCAGCACTCCAAAATCAGGGATCTGCGTAGTCATCTAGATTCCCATCAGTTTGCAGTGAACCTGCCTCCGGATAGAGAATCCAACAGCATCTGTCGCTCTCTGTATGCCGAACTAAGTGCACCTCTGCCCAGAGATCAACTTATTGAGAGAATCAAAAGTGATGTGGCCAAAAGCCTGGAGCTGGACAGATTTATATCCATTACCAACGAGGCGGGCATGGAGCTCAGCCTGGAGAGCAGTGAAACAGAAACGGATtccgaggaggaggaggagcaggaaaCCAAAGCAGCTGGACCGGAGACGTATGAATGCAATCTCTGTCATTTGAAGATGCAGCGTAAATATCAACTGTATAACCATCAGATGGAGCAGCACAACAATTGGGCGGAAGAGGGTTCGAGCGTTTGTCCCCACTGTCAGGCCCGCTTTGTGAGTGATCTGCTGCTGGAGCATCATCTGCGTAGCTTGTGCCGGAATACACACAAACGTTTCCAGTGCCGCAAGTGTCCCCTACGTTTCCGCTGGCGGGAGAATCTCAAATTGCATACCAATCTCTCACACCAGCCCACAGAAACGGGCGAGGAGGCGCCCGAGTTGAGTTGCCAGCAGTGCAATCGtagctttaaaatgcaaaaggaTCTCACCCGGCACATACTCATGCATGGCCAGGAGTCGAGCATCTATCGTTGTCGCTGGTGTGCCCGTCGTTTCTATCGCCAGGCCAATCTGCTGCAGCATATCGAACGTCATGGCATAGGTGCCAATCAGCTGCCCTATGCCGAGGCACTGCTCAATGCCTACGGGCAGGCCAATGGTCCGAAAGTGATACTCTGCAAGATGTGCGAGATGAGCTTTGGCAGTATACAGGCTCTGCGCCTGCATTTGGTCAGTAATCATCAGTTGTCCCTGGCCATGGCCACCCCGCAGAACTATTCTATAACCAATCAGGCGGGCTATGAACTGCATCTAGAGGATTCGGAAACGGATGAGGCAGAGGGTGCAGCTGAAGTGATCAAGGCGGAGGGTACACCCGCCTGCTACACCTGCAGCATGTGCCAGCTGAGATGTGTGAGAAAATATGAGctgcatcagcatcagcaggcCATGCATCGTGTGGAGAAGGTGCCCCAGGGCTGTGATCAATGCATTTTCAAGAGCGTCTCCTCGCATCTGATAGCCCATCATAAGCGGGTGCAGTGTGGCAGTCAGGAGAAGCAATTTAAGTGCGTCAAATGCTCGTACAAATTCATGTGGGAATCCAATCTGCTGCTACACATGCAAATCCAGCATGGCAAGGCCGAGGAGGAGGAACCAACGGCGGAGCAGGCAATTGCCAGCCAGGAAGACAACAAAGTTGAAACCCAGCCAATCTTCCAGTGTGCCCAGTGTCCGCGCAAATACAATCGCAAGGATCGCCTTACAGCGCACATGAAGAAATTCCATAATCCTGCCCTGAGCAAGGACAATGTTATACAGCCTCCGCCTGCTGCATCCGCTTCCACTTTACCAGCCAAACAGCCGAAACGTTTTCTGTGTGCCTTCTGCGGCAAAGCCGTCAGCTCATCCTCCAATCTCATTATACACATGCGACGCCACACCGGTGAGAAGCCATTCAAGTGTGATTTCTGTGACATGGCCTTTCCCCGTTCCTCGGATCTGCAGTGTCATCGACGCACCCACACCGGGGAACGGCCGCATGTGTGCACCGTCTGTCACAAGGGTTTCGCGCGTTCCTACAAACTGCAACAGCACATGCGGATACACAATGGCGAACGACCCTACAAGTGTACCTATTGCGAGAAGAGTTTCACCCAGTCCAATGACTTGACTCTGCACATACGACGCCACACGGGCGAACGTCCATATCAGTGTGGCACTTGTGGCGAGCGTTTCATTCAGGGCACCGCCTTGAAGAATCATCGCTTGCAGCAGGGACACTATGAGGAGGGCAGCCAGGGTGCAGGCGATCCGCCACCCCGACGCACAGTTCTGGAGCAGTTTAAGGGAGAGTGA
Protein Sequence: MLPTDICRTCGQQNANLLPLSSCLEKLQELTQIPLQEESEDDNLPQQVCGDCLGRLENAYAFVEQARKVNGELMVRLRQCLEEAPIDLPLEQIKMEMEEPEHEAEKAHESDDAIKWQPDVSSEESEAEAGDLNWTEENEVDAKPYQLRRSLRKIKPPLDSEEEPERQSSNQEEPLTLPPKRGRGRPPRLAKTLTLNSEGRHACQVCGKSFSWFRDMQRHARIHFEVASHVCPSCGKTFLRKDKYQFHLRSHERRQTKCQSTTTLSKEWRFAERLYSSAALKCLECKLCGLNCAKIQELRTHLEGHAQKETLSQLSLEKEVIKELYPNHQLEQLPQIKEHICKELSEGHLQQFCAVVNAFGYELSLSDSDDELLAESQYECVTCQLNFKRKHLLLRHTLEEHTETNAVPPQFRCNLCQIGFVCPRFFEQHQRTQCHSKMKRYRCRNCPGKFMWLENLERHSCVQSQLTSLKQLQCCLCDKQLPSLSQLRAHLMGHRDGSTGIDPQQKASFFRSYYPKGLACTQAELMARIAGDFEAQDYGRYYNACSGSGQEMDLFDSDTDTADRDKKLQHICSLCGEITHRLSQLLEHQQLAHSQEDIPLPYSCEDCAKGYVSDLLLQQHRRRNCGKRHAKYQCQLCQQHFVWQANYEQHQRVHHQEVAEQADQKNEPAEEGELTSKRKNSATKLQCDECEKVFIWVKDLNRHKRLHLPQTAAQYECPHCERKFHRKDGLKSHLRIHSDQQQQQQQELEKTEDYSTPAQSSMALPQLGRAHGCKQIQCMICLSQHSKIRDLRSHLDSHQFAVNLPPDRESNSICRSLYAELSAPLPRDQLIERIKSDVAKSLELDRFISITNEAGMELSLESSETETDSEEEEEQETKAAGPETYECNLCHLKMQRKYQLYNHQMEQHNNWAEEGSSVCPHCQARFVSDLLLEHHLRSLCRNTHKRFQCRKCPLRFRWRENLKLHTNLSHQPTETGEEAPELSCQQCNRSFKMQKDLTRHILMHGQESSIYRCRWCARRFYRQANLLQHIERHGIGANQLPYAEALLNAYGQANGPKVILCKMCEMSFGSIQALRLHLVSNHQLSLAMATPQNYSITNQAGYELHLEDSETDEAEGAAEVIKAEGTPACYTCSMCQLRCVRKYELHQHQQAMHRVEKVPQGCDQCIFKSVSSHLIAHHKRVQCGSQEKQFKCVKCSYKFMWESNLLLHMQIQHGKAEEEEPTAEQAIASQEDNKVETQPIFQCAQCPRKYNRKDRLTAHMKKFHNPALSKDNVIQPPPAASASTLPAKQPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGERPHVCTVCHKGFARSYKLQQHMRIHNGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGTCGERFIQGTALKNHRLQQGHYEEGSQGAGDPPPRRTVLEQFKGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00919976;
90% Identity: iTF_00914665;
80% Identity: -