Lcam014980.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- arid5b
- Assembly
- GCA_905147385.1
- Location
- LR990253.1:1058211-1072697[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-11 4.9e-08 34.0 0.3 3 89 243 314 241 314 0.86
Sequence Information
- Coding Sequence
- ATGCTGCGGTTTCAGCGGCCCCTGAGCAAGAGCCCAGAGTCTACTGGATCCGCAGCACTAATGGGATGGGAGAGGGAGGGGGATGAAGTACTAGCCATCAATGATAAAGTTGTTCTGAAAGCGGAAGACCTCCTCAGCTGGGTATGCAATGGTTCCGGCTGGAGGTGGGGCTTGAGGGCTGTGTGGAGGGGAGCTTGTGCTCCACCTTCTGACCCTCGGCTGACTGCTCCTCTGCATCACACGAAATTGGACTTCAGTGATGTGGAAAGAGAGAAGAGTGCTATAACGGTAGATGTGGAAGATCCAGGAGTGGTGGTGTTCTCGTATCCCCGGTACTGCAGGTACAGAGCACTCCTCGCTCGTCTTGAGGGTATTCAGGCAGACTGGCTGAGGGATTCCCTGGTGGCTGCGTTAGGAGGATATGCTGCCTCAACGAAGAATACAAGAATATTGTATTGCAAAGAAACCTTCGAATATCCAGAACTAGAAGGTCACGAGTTCGTCTGTAACCACTTAGCTCCAAAACTTAAAGGTCGACCACGTGGACGACGGCGGAGGGCGGCACAATCGCGGGACAGATCCGCTGACAGATCTCCAGACTCACGATCTAGTGATAGCGATAGAAATACGCCTGTTAGGACTCCAAGAAGACTTTCTCTAAGAAATGGACCAGAGAAGCAAAGTGAAGAAGAAGAGGAGAAGAATCCAGAAGAGCTAGCAAAGGATGAAGCATTTCTGCAGCAGTTACAGGACTTCCTGAAACACAAGAGCGATATTAAGATATCGCATAATGTTAAAAATGTATCCCTCCGATCTCTCTACTCCTGGGTGACGTCACTAGGAGGGTATGGCGCCTGTCGGGATCAGCTCTGGAGGAGGCGCTACGCTGAGAGAGCGACTAAACTACGTCGAATTTATGAACGATACCTTCTCCAGTTTGAAAACCACGAAAGATGGAACGGCAAGAAATACCAAAAACTTATAAACGGGAAGATCGACGAACCAAAGACTATAGACACAATAGACGTCTCCGATTCCCCCGTCCGGGAGACAGAGAAAATCGATTTCCCCGAAAAAAGACTCAGAACTCCTTCCCCCAAACTCGAAAACTCGGAAAAACTCATTCAAGATAACGAAACTGGAGAAATTATGAAGGAAGAATTGAATATCACTTCAAAGCCTGCTGAAGAATTGAATAGAGAATTCCTTGAGTCTTTGCCGAAGGAGGAGGAGAAGGTGAAGATATTCTTGAAGCCGGTGGAGAAGTTGATTGAGCCTGAGAAGTTGGAGAATGAGGAGAAGAAAGATGGAGGGATCTTTTTGAATGAATTAGCGCAGAAATTGAATTTAGGTAATTCCGACACACGTTTCCTTCAGCAGCTGTCACAGAAACAGACAGAGTTTAGCACTCTCAACTCTCTCTCTTCTCTCCATGACAAATATACCAACGGACACACCCCTGATGTTCAAAAAACTCGTCCAGTCGGTCGGAGTTCTCTGCGAGCAGTGCGCGTCAAACCTACGCGACCTATTTCAGCTTCAGCTACACCACCCATTCCTCCTCTTCGAACAGATTCCGCATCATCATCACCACCTCTACCGGTCATCAATAACTTCGGCATTCATCACCCACCACACCACAGTGATGATGAAATTGTTGAGGTACCCTATAAACCAAAAAGCCCAGAAATAATCGACTTAGACGAATACCCAGAGAGCCCACAAGGGATAAAGAAGAAAAAATTAGATATCCTGAAAGAACGAGGCCTAGAAGTCACTGCAGTGCCACCCAACCCGTGGCCACAACCACTAAATCCATTAACCCCTCTAATAGCTCCAAGTCCTATCATACTAAACCCAACAATCCAGCACCAAATCATGACTCAAGCTCAAATATTCCAAATGTATAATATAATCCCACCAAATTATCAAAATGGCGTCCAAGCACCCAAAGTGATTCAAGCATCGAGCGCATTCGGAACTTCAGGTCCCGAGAAAACGGTCTATGGAAACCCGAAAGACCCCTTCATGCCACCTCCACACGTACTACAAGGAACCCCTATCAAGCCTCAACGATCCATCCAAACACCACCAACCACTCCTCAAGACATCTTAGACTTGACCTGCAAGAACCAAATCCAAAAACCAGCAGTTGAAATCGTCCGAGTACCCCCAGCACCATCGCCCTCCAAAACCCCCAACATAGCCCAAAATCTAAGTAAAAACTACACCCTGCTTGATGGAAAAGCAGTCGTGGGTTCTAATCTAGAAATAACATTAGTCAATAAATCCCAAACCCCTCCAAAACGACCCCCACAAAAAAGATCTTCAAACGGTAAATTCATTTCCGCAAAAACCCCAACACCTCCCAAAGATTACCCAAAACCATTCACACCACCAAAAAAGCCCCCTATCACTGTTCCTAATTACCAAATTCCAAATCGAGATGAATCCCCTACAAGTTCAAAGGACCCTAACATGTTTAAGGGATCTAATTTGACTCAAATGATGGAGATGCAGAAGTCTGTCCCCAGCTTGAACCCCTTCATGGACCCCTTGTACATGAATGCATTTTACAACACGCTGGGCTCGGACCCCCGACAGTTGGCCATGTATAGAGATTTAATGACAAATCAGTTTAGAGGTTATAGCGGCTTACTAAACATAGGCACACCGACAACGAAGAATTAG
- Protein Sequence
- MLRFQRPLSKSPESTGSAALMGWEREGDEVLAINDKVVLKAEDLLSWVCNGSGWRWGLRAVWRGACAPPSDPRLTAPLHHTKLDFSDVEREKSAITVDVEDPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAASTKNTRILYCKETFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAAQSRDRSADRSPDSRSSDSDRNTPVRTPRRLSLRNGPEKQSEEEEEKNPEELAKDEAFLQQLQDFLKHKSDIKISHNVKNVSLRSLYSWVTSLGGYGACRDQLWRRRYAERATKLRRIYERYLLQFENHERWNGKKYQKLINGKIDEPKTIDTIDVSDSPVRETEKIDFPEKRLRTPSPKLENSEKLIQDNETGEIMKEELNITSKPAEELNREFLESLPKEEEKVKIFLKPVEKLIEPEKLENEEKKDGGIFLNELAQKLNLGNSDTRFLQQLSQKQTEFSTLNSLSSLHDKYTNGHTPDVQKTRPVGRSSLRAVRVKPTRPISASATPPIPPLRTDSASSSPPLPVINNFGIHHPPHHSDDEIVEVPYKPKSPEIIDLDEYPESPQGIKKKKLDILKERGLEVTAVPPNPWPQPLNPLTPLIAPSPIILNPTIQHQIMTQAQIFQMYNIIPPNYQNGVQAPKVIQASSAFGTSGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRSIQTPPTTPQDILDLTCKNQIQKPAVEIVRVPPAPSPSKTPNIAQNLSKNYTLLDGKAVVGSNLEITLVNKSQTPPKRPPQKRSSNGKFISAKTPTPPKDYPKPFTPPKKPPITVPNYQIPNRDESPTSSKDPNMFKGSNLTQMMEMQKSVPSLNPFMDPLYMNAFYNTLGSDPRQLAMYRDLMTNQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457798; iTF_00457032; iTF_00775051; iTF_00246970; iTF_00722824; iTF_00722825; iTF_00247828; iTF_00159614; iTF_00779306; iTF_00781611; iTF_00777230; iTF_00780054; iTF_00774297; iTF_00780826; iTF_00777791; iTF_00621008; iTF_00213203; iTF_00212212;
- 90% Identity
- -
- 80% Identity
- -