Basic Information

Gene Symbol
-
Assembly
GCA_037178615.1
Location
JAZFAU010000312.1:16800-22889[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-11 9.3e-08 33.4 0.1 3 89 165 236 163 236 0.85

Sequence Information

Coding Sequence
ATGGGTAAAGTTCGCGAAATTAGTATCGAAACGCGATCTGCCATCGTCGTTCTCCATAATGAAGGCAAATCTGAACGTGAGATTGCATCTCATTTCAAATTATCGAAGACTTGCGTTCATCGCACTATTGTGCGGTACAAAGAAACTGGCGGTAACCAAGATCGTCCGCGCTCCGGAAGACCAAGGGTTATGACTTCTAGTGAAGACAAGTTTATTGTGGAAACGTTCGAATATCCAGAGCTGGAAGGGCACGAGTTCGTTTGCAATCACTTAGCTCCAAAACTAAAAGGTCGACCTCGAGGCAGACGGAGGAGAGCGGCGCAGTCCCGAGACAGATCCGCGGACAGATCTCCGGATTCCAGATCGAGCGATAGTGACAGAAACACTCCAGACACTAGGacaCCCAGAAGGCTATCCCTAAGAAACGGTGCGGAGAAACAGAGCGAGGAAGAAGATGAAATCGAGAAGAATCCAGAAGAAGTGGCCAAAGACGAGGCCTTTTTGAAACAGCTCAGGGACTTCCTTAAACATAAGACGGATATTAAAATATCGCACAGCGttaaaaatgTATCTCTCCGCTCTCTCTACTCGTGGGTGACGTCACTCGGAGGCTTTAGTTCGTGTAGAGATCAACTATGGCGGAGAAGATACGCGGAGAGAGCTCCGAGACTAAGACGGATATATGAAAAGTATCTCTTACAATTCGAAAACCACGAAAGATGGAAAGgcaaaaaatatccaaaacttCCCAACGGAAAACTAGAGGAACCAAAGACAATAGACACTATAGACGTTACAGACTCACCCGTCAGATCTCCCCCTCCACTCTCCGTTCCCCACAATCTCTCCGAAAAGAGACTGAGGACACCTTCTCCCAAATCAGATATGGAGAAGAAAGATGATAAACTAATCTTGGATAATGAAACTGGAGAACTGACTAAAGAAGAATTAAATATCACATCGAAACCCGCTGAGGAGTTAAACAGAGAGTTTTTAGAGTCTCTGAAAACTCCCGAGGAGGAGAAAGGAAAGATTTTCGTGAAACCCGTGGAGAAATTAATAGAGCCTGGTTTGGGGATGGAGAGCGATAAAGACAGTAAGAGTGAAGGTGTGTTCTACAATGAATTGGCGCAAAAGTTGAATTTGGGTAATTCGGACACGCGTTTCTTACACCATCTATCCCAAAAGCAGGATAGCCTCTCCTCTCTATCCTCTATGCAGGATAAATATACGAACGGACATACAACTGATCCGcaaaAAGCTCGTCCGGTGGGACGCAGCTCTCTCCGCGCTGTTAGAGTTAAACCCACAAGGCCAATATCTGCTTCAGTAACGCCGGCTCCACCTCATCGCACGGACTCTTCATCATCACCGACCCTTAACAACTTCGGCATCCATCACCCTCCACCGGCCAGCCACAGCGATGACGAAATTGTAGAAGTCCCGTATAAACCAAAAAGTCCAGAAATCATCGACCTCGACGAATACCCCGAAAGTCCTCAGGGCATTAAGAAGAAGAAACTGGAAATTCTCAAAGAGAGGGGCCTCGAAGTGACCGCTGTACCCCCGGGGCCCGTGTGGTCCCATCCCCCCATTAACCCCTTAATAACCCCAAACCCCATAATCCTGAACCCCACTATTCAACACCAAATTATGACCCAAGCCCAACTATTCCAAATGTACAACATTGTCCCACCAACTTACCCAAATGGGGTACAAGCTCCCAAAGTTATACAAGCTTCCAGCGCTTTCGGAACCTCTGGACCGGAGAAAACGGTCTACGGCAACCCCAAAGACCCCTTCATGCCTCCTCCGCATGTGTTACAAGGAACCCCAATAAAACCCCAAAGAAGTGTCCAAACTATTCCAACTACACCTCAAGATATTTTGGACTTGACATGCAAAACTCAGTCCGCTCCCACTCAAAAGCCTGCCGTCGAAATAGTCCGAATAGCCTCCACCCCCTCACCGTCAAAAACCCCCAACCCCCTAAACACACCCcaaaatttaagcaaaaattaCACTCTAATCGACGGCAAAGCGGTAGTGGGTTCCAATTTAGAAATCACGCTAGTTAACACCAAATCCCAAACACCTCCAAAAAGACCACCACAAAAACGCTCCTCCAACGGCAAATTCATATCCGCAAAGACCCCCACACCCCCAAAAGACTACCCCAAACATTTCCCGTCACCCAAAAAACCCTCAATCGTCGTACCCAATTACCAAATCCCAAATCGCGAGGAGTCCCCCACAAGTTCAAAAGACCCCAACGCTTTTAAAGGTTCAAATTTGACCCAAATGATGGAAATGCAGAAGAGTGTACCCAGTTTGAACCCTTTCATGGACCCTTTATATATGAATGCGTTATATAACACATTAGGTCCTATGGACCAGCGTCAGCTCGCAATGTACCGGGACCTTGTGTCGAATCAGTTTAGGGGTTACAGCGGGTTATTGAACATAGGCACACCGACAACGAAGAATTAG
Protein Sequence
MGKVREISIETRSAIVVLHNEGKSEREIASHFKLSKTCVHRTIVRYKETGGNQDRPRSGRPRVMTSSEDKFIVETFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAAQSRDRSADRSPDSRSSDSDRNTPDTRTPRRLSLRNGAEKQSEEEDEIEKNPEEVAKDEAFLKQLRDFLKHKTDIKISHSVKNVSLRSLYSWVTSLGGFSSCRDQLWRRRYAERAPRLRRIYEKYLLQFENHERWKGKKYPKLPNGKLEEPKTIDTIDVTDSPVRSPPPLSVPHNLSEKRLRTPSPKSDMEKKDDKLILDNETGELTKEELNITSKPAEELNREFLESLKTPEEEKGKIFVKPVEKLIEPGLGMESDKDSKSEGVFYNELAQKLNLGNSDTRFLHHLSQKQDSLSSLSSMQDKYTNGHTTDPQKARPVGRSSLRAVRVKPTRPISASVTPAPPHRTDSSSSPTLNNFGIHHPPPASHSDDEIVEVPYKPKSPEIIDLDEYPESPQGIKKKKLEILKERGLEVTAVPPGPVWSHPPINPLITPNPIILNPTIQHQIMTQAQLFQMYNIVPPTYPNGVQAPKVIQASSAFGTSGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRSVQTIPTTPQDILDLTCKTQSAPTQKPAVEIVRIASTPSPSKTPNPLNTPQNLSKNYTLIDGKAVVGSNLEITLVNTKSQTPPKRPPQKRSSNGKFISAKTPTPPKDYPKHFPSPKKPSIVVPNYQIPNREESPTSSKDPNAFKGSNLTQMMEMQKSVPSLNPFMDPLYMNALYNTLGPMDQRQLAMYRDLVSNQFRGYSGLLNIGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00896559;
90% Identity
iTF_00621008;
80% Identity
-