Hcha014185.1
Basic Information
- Insect
- Heliconius charithonia
- Gene Symbol
- arid5b
- Assembly
- GCA_030704555.1
- Location
- CM060824.1:3436368-3446457[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-09 4.2e-06 27.6 0.3 3 89 229 300 227 300 0.84
Sequence Information
- Coding Sequence
- ATGAATTTTGAATGGTCTCCACCTTTCAAAGATGAAGTATTAGCAATCAATGACAAAGTGGTTTTAAAAGCTGAAGATCTTTTAAGTTGGGTATGCAATGGTGCTGGCTGGAGATGGGGTCTAAGAGCAGTATGGAGGGGGGCTTGTGCACCCCCATCAGATCCGCGACTCACCGCACCGTTACATCACACGAAACTCGACTTCAGTGATGTGGATCGGGAGAAGAGTACTATAACAGTGGACGTAGACGACCCAGGTGTAGTAGTCTTTTCTTACCCACGCTATTGTCGGTACCGAGCATTAGTGGCCAGGCTCGAAGGGATCCAGGCTGACTGGCTGAGAGATTCCCTCGTGGCAGCCTTAGGAGGATACGCCGCACCTACAAAACACACcagaatattatattgtaaaGATACATTCGAATATCCAGAGCTCGAAGGTCACGAGTTTGTCTGCAACCACCTAGCTCCGAAACTTAAAGGACGGCCTCGAGGAAGACGGAGGAGAGCAGCACAATCCCGAGACAGATCCGCAGACAGATCTCCAGATTCAAGATCTAGTGATAGTGACAGGAACACTCCTGAAACAAGGACACCAAGAAGGCTATCCCTCCGAAATGGCGCAGAGAAACAGagtgaagaagaagaagaagtagaGAAGAATCCAGAAGAACTGGCAAAAGACGAGGCCTTTTTACAGCAACTTAAAGACTTTCTCAAACacaaaactgaaattaaaatatcgcatagtgttaagaacgTGTCGCTGCGCTCGCTGTACGCGTGGGTGCGCGCGCAGGGCGGGCTGGGAGCCGCGCGCGAGCAGCTGTGGCGGCGCCGCTACGCCGAGCGCGCGCCGCGCCTGCGCCGCGTCTACGAGAAATATCTCCTACAATTCGAAAACTACGAACGATGGAACGgcaaaaaatatccaaaacttGCGAACGGCAAGCTAGAAGAACCAAAGACAATAGACACAATCGACGTGACAGACTCCCCAATAAGAGAAATAGAAACAAAACACGATCTCCCAGAAAAAAGATTAAGAACTCCGTCCCCAAATATGGATAAGAAATCGGACAAAATGGATAAGAAGGACAAACTAATTTTGGACAATGAAACCGGGGAACTAACGAAGGaagagttaaatataatttcgaaACCCGCTGAGGAATTGAATAGAGAGTTTTTAGAGTCGTTGCAAACTCCCGAAGAAGAGAAGGGGAAGATTTTCGTCAAACCTGTCGAGAAGTTGATAGAGCCAAGTTTGGGGGAGAATGAGAAGGATAGTAAGAGTGAAGGCGTGTTCTTTAATGAATTGGCGCAGAAATTGAATTTAGGTAATTCAGACACACGTTTCTTGCACCACCTATCTCAAAAACAAGACAGCCTCTCCTCTTTGTCGTCGATGCAGGAAAAATACACGAACGGACACACAACTGATCTGCAAAAAACTCGTCCGGCGGGTCGCAGCTCCCTCCGCGCGGTGAGAGTCAAACCCACGAGGCCAATATCCGCTTCAGCTACACcgGCCCCTCCACCCCGTACGGACTCCTCATCATCACCGACGCTCAACAACTTCGGCATCCATCATCCTCCACCCGCCAGTCACAGTGATGATGAAATTGTAGAAGTTCCATATAAACCAAAAAGTCCAGAAATCATTGACCTCGACGAATACCCAGAAAGCCCTCAAGGCATCAAGAAGAAGAAACTAGAAATTCTCAAAGAAAGGGGCCTTGAAGTAACCGCCGTACCTCCCGGGCCCGTTTGGCCCCATCCCCCCATTACCCCTTTAATAACTCCTAGCCCTATCATCCTTAACCCTACAATACAACACCAAATTATGACCCAAGCGCAATTATTCCAAATGTACAATATAGTCCCACCGACCTACCCCAATGGGGCACAAGCTCCCAAAGTCATACAAGCGTCTAGCGCTTTCGGTACATCAGGCCCCGAGAAAACAGTGTACGGCAACCCCAAAGACCCTTTTATGCCACCTCCACACGTGTTACAAGGGACCCCAATTAAAcctctaagaaatattcaaACTCCCCTCCCTAATCCTCAAGATATTTTAGACCTGACTTGCAAAACCGAGACTTCTCCCATACAAAAACCTGCCGTAGAAATAGTCCGAATAGCCTCAACCCCTTCTCCGTCAAAGTCCCTGAATTCTTTAAACACCCCCCAGAATTTAAGCAAAAACTACACCCTAATCGATGGCaaagcggttgtgggttctaatcTAGAAATCACGCTAGTTAACACCAAATCCCAAACACCCCCAAAAAGACCCCCACAGAAACGCTCCTCCAATGGAAAATTCATATCCGCAAAGACCCCCACACCCCCAAAAGACTACCCTAAACCATTTGCTTCCCCCAAAAAACCTCCAATAACCGTTCCCAATTATCAAATTCCTAACCGTGAAGAGTCGCCGACTAGTTCAAAAGACCCCAACGCTTTTAAAGGTTCAAATTTGACCCAAATGATGGAGATGCAGAAAAATGTACCCAGTTTGAACCCTTTCATGGACCCTCTGTATATGAATGCGTTATATAACACTCTCGGTCCAATGGACCAACGTCAACTCGCGATGTACCGGGATCTAATGTCCAATCAGTTTAGGGGTTACAGCGGGTTGTTGAACATAGGCACACCGACAACGAAGAATTAG
- Protein Sequence
- MNFEWSPPFKDEVLAINDKVVLKAEDLLSWVCNGAGWRWGLRAVWRGACAPPSDPRLTAPLHHTKLDFSDVDREKSTITVDVDDPGVVVFSYPRYCRYRALVARLEGIQADWLRDSLVAALGGYAAPTKHTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAAQSRDRSADRSPDSRSSDSDRNTPETRTPRRLSLRNGAEKQSEEEEEVEKNPEELAKDEAFLQQLKDFLKHKTEIKISHSVKNVSLRSLYAWVRAQGGLGAAREQLWRRRYAERAPRLRRVYEKYLLQFENYERWNGKKYPKLANGKLEEPKTIDTIDVTDSPIREIETKHDLPEKRLRTPSPNMDKKSDKMDKKDKLILDNETGELTKEELNIISKPAEELNREFLESLQTPEEEKGKIFVKPVEKLIEPSLGENEKDSKSEGVFFNELAQKLNLGNSDTRFLHHLSQKQDSLSSLSSMQEKYTNGHTTDLQKTRPAGRSSLRAVRVKPTRPISASATPAPPPRTDSSSSPTLNNFGIHHPPPASHSDDEIVEVPYKPKSPEIIDLDEYPESPQGIKKKKLEILKERGLEVTAVPPGPVWPHPPITPLITPSPIILNPTIQHQIMTQAQLFQMYNIVPPTYPNGAQAPKVIQASSAFGTSGPEKTVYGNPKDPFMPPPHVLQGTPIKPLRNIQTPLPNPQDILDLTCKTETSPIQKPAVEIVRIASTPSPSKSLNSLNTPQNLSKNYTLIDGKAVVGSNLEITLVNTKSQTPPKRPPQKRSSNGKFISAKTPTPPKDYPKPFASPKKPPITVPNYQIPNREESPTSSKDPNAFKGSNLTQMMEMQKNVPSLNPFMDPLYMNALYNTLGPMDQRQLAMYRDLMSNQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00896559;
- 90% Identity
- iTF_00457032; iTF_00779306; iTF_00781611; iTF_00777230; iTF_00780054; iTF_00774297; iTF_00780826; iTF_00777791;
- 80% Identity
- -