Basic Information

Gene Symbol
arid5b
Assembly
GCA_905231865.2
Location
HG993159.1:7287009-7297797[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-08 0.00014 22.8 0.2 3 89 222 294 220 294 0.80

Sequence Information

Coding Sequence
ATGTACGATGAAGTCCTAGCGATCAACGACAAGGTAGTCCTGAAAGCAGAAGATCTTCTCAGCTGGGTGTGTAATGGGGCTGGTTGGAGATGGGGTCTCAGAGCTGTGTGGAGGGGAGCCTGCGCGCCACCTTCCGACCCTCAGCTGACTGCTCCTCTGCATCACACGAAGTTGGACTTTAGTGATGTGGACAGGGAGAAAAGTGCTATAACGGTAGACGTAGATGACCCAGGAGTTGTGGTCTTCTCATACCCTCGGTACTGCCGATATCGGGCTCTGTTGGCTCGACTCGAGGGCATTCAGGCGGATTGGTTGAGGGACTCCCTGGTAGCTGCTTTAGGGGGGTACGCAGCCCCCACCAGGAATACGAGGATATTGTACTGTAAGGACACCTTCGAATACCCAGAACTGGAAGGCCATGAGTTCGTCTGTAACCACCTAGCTCCTAAACTGAAGGGGAGGCCCCGCGGCCGCCGGCGCAGAGCCGCTCGATCCCGGGACCGATCTGCGGATCGATCCCCGGATTCGCACTCGAGTGACAGTGACAGGAACACGCCGGAAGCTAGAACCCCAAGAAGACTATCTCTAAGAAACGGCGCAGAAAAGCAGAGTGAAGAAGAAGAAGAAGAAGTAGAGAAGAACTCAGAAGATTTGGCAAAGGATGAAGCCTTTTTGCAGAAACTAAGAGAATTTTACAAGCACAAAAACATCAATATCAAATTATCTCATAGTATTGATAACATGCCGCTACGTCCGCTGTACGTATGGGCGTGGTCGCAGGGCGGGTACGGCGCGTGCCGCGAGCGACAGTGGCGCCGCCGCTACGCCGAGCGCACGCCGCACGCGCGCCGGATATACAAACGATATCTGCTCGAATTCGAAAACCATGAACGATGTAAAGGAAAGAAATATTCCAAATTAGCCAATGGGAAGCTCGAAGAACCAAAAACCATCGATACCATAGATGTGACAGACTCTCCCATAAGGGACGTTGACACGAAACCTAACTTACCAGAAAAAAGACTCCGAACTCCATCCCCAAAACTCAAAAATTCCGAAAAATCCGAAGTTCCGGAAAAACTCGGAAATCCGGATAAAATCGGAAATCCGAATAAATTGGTGTTAGATAACGAAACCGGTGAACTGACAAAAGAAGAATTAAATATAACCTCTAAGCCCGCAGAAGAGTTGAATAGAGAATTTTTAGAATCACTGAAAAATCCTGAAGAAGAAAAGGCTGCGAAGATTTTCGTGAAACCAGTAGAGAAATTGATAGAGCCGAGTTTGGGGAAAGTGGAGAGTGAGTCGAAGGATAGCAAAAATGAAGGCAATTCGGTGTTTTTGAATGAATTAGCTCAGAAATTAAATTTAGGCAATTCCGACACACGGTTCCTCCACCACCTCAATCAGAAGCAAGACAGCCTCTCCAGCCTCTCTTCCCTCCAGGATAAATACACCAACGGGCATACATCTGACCCCCAAAAAGCCCGTCCGGCGGGTCGCAGCTCGCTGCGTGCGGTGCGCGTGAAGCCGGCGCGTCCACACTCCGCCTCCGCCACACCCGCGCCCGCCGCGCCGCGAGCCGACTCGTCCTCCTCGCCGCCCACCATCAACAACTTCGGGATCCATCACCCGCCACAGAACAACCAAAGCGACGATGAAATCATTGAGGTTCCATATAAACCAAAAAGTCCGGAAATAATCGATCTCGATGAATACCCGGAAAGTCCACAAGGCATTAAGAAGAAGAAGCTAGAAATCCTCAGAGAAAGGGGCCTCGAAGTAACCGCTGTGCCCCCTGGCCCCATCTGGCCTCATCCCCCTATAAACCCCTTAATAGCCCCTAGCCCCATCATCCTTAACCCAATCCAACACCAAATTATGACACAGGCACAAATATTTCAAATGTATAATATTATCCCACCGAGTTACCCCAATGGGGTTCCAGCTCCCAAAGTTATTCAAGCTTCAAGTGCCTACGGCAATTCAGGCCCTGAGAAAACCGTGTACGGGAATCCTAAAGACCCCTTTATGCCAACCCTTCATGTATTGCAAGGGACCCCTATTAGGCCCCAAAGAAGTATCCAAACCCCTCCCTCAACACCGCAAGATATATTAGACTTAACCTGCAAAACTCAAGCAACTCCTATACAAAAGCCAGCTGTTGAAATAGTTAGAATACCCCCCGCCCCCTCACCGTCCAAAACCCCCAACAACCCCCAGAACCTAAGCAAAAACTATACTCTCCTTGACGGGAAAGCTGTAGTTGGTTCAAATCTAGAAATAACATTAGTGAATGCTAAATCCCAAACACCCCCAAAGAGACCCCCACAAAAACGCTCCTCAAACGGCAAATTCGCCTCGGCGAAAACACCAACACCCCCAAAAGATTACCCCAAACAGTTCCCGTCCCCCAAAAAGCCCTCAATAGTCGTTCCAAACTACCAGATCTCAAATCGAGAAGAATCGCCAACGAGTTCAAAAGACCCCAACGCATTCAAGGGCTCGAACCTAACCCAGATGATGGAAATGCAAAAATCTGTACCAAGTATGAACCCTTTTATAGACCCCTTGTATATGAATGCGTTTTATAATAGTCTGGGTCCAATGGACCAACGTCAATTGGCAATGTACAGGGACCTTATGACCAACCAGTTTAGGGGTTACAGTGGGTTATTAAACATAGGGACACCGACAACGAAAAATTAG
Protein Sequence
MYDEVLAINDKVVLKAEDLLSWVCNGAGWRWGLRAVWRGACAPPSDPQLTAPLHHTKLDFSDVDREKSAITVDVDDPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAARSRDRSADRSPDSHSSDSDRNTPEARTPRRLSLRNGAEKQSEEEEEEVEKNSEDLAKDEAFLQKLREFYKHKNINIKLSHSIDNMPLRPLYVWAWSQGGYGACRERQWRRRYAERTPHARRIYKRYLLEFENHERCKGKKYSKLANGKLEEPKTIDTIDVTDSPIRDVDTKPNLPEKRLRTPSPKLKNSEKSEVPEKLGNPDKIGNPNKLVLDNETGELTKEELNITSKPAEELNREFLESLKNPEEEKAAKIFVKPVEKLIEPSLGKVESESKDSKNEGNSVFLNELAQKLNLGNSDTRFLHHLNQKQDSLSSLSSLQDKYTNGHTSDPQKARPAGRSSLRAVRVKPARPHSASATPAPAAPRADSSSSPPTINNFGIHHPPQNNQSDDEIIEVPYKPKSPEIIDLDEYPESPQGIKKKKLEILRERGLEVTAVPPGPIWPHPPINPLIAPSPIILNPIQHQIMTQAQIFQMYNIIPPSYPNGVPAPKVIQASSAYGNSGPEKTVYGNPKDPFMPTLHVLQGTPIRPQRSIQTPPSTPQDILDLTCKTQATPIQKPAVEIVRIPPAPSPSKTPNNPQNLSKNYTLLDGKAVVGSNLEITLVNAKSQTPPKRPPQKRSSNGKFASAKTPTPPKDYPKQFPSPKKPSIVVPNYQISNREESPTSSKDPNAFKGSNLTQMMEMQKSVPSMNPFIDPLYMNAFYNSLGPMDQRQLAMYRDLMTNQFRGYSGLLNIGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00896559;
80% Identity
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