Basic Information

Gene Symbol
arid5b
Assembly
GCA_037355905.1
Location
JBAIZZ010000304.1:690981-699704[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-10 1.1e-06 29.0 0.1 3 89 248 319 246 319 0.87

Sequence Information

Coding Sequence
ATGAATATATCTAGGCAATGTCTCGATAATTGGGCGGTGTGTAGATTCGTCCTGACCATCCTACTACACGCGCGATACAGTCtgaaggATGAAGTATTAGCAATCAACGACAAAGTGGTATTAAAAGCTGAAGATCTTTTAAGTTGGGTATGCAACGGGGCTGGCTGGACATGGGGCCTGAGAGCAGTGTGGAGGGGGGCTTGTGCACCCCCATCAGATCCGCTACTCACCGCACCGTTACATCACACGAAACTGGACTTCAGCGATGTGGAACGGGAGAAGAGTGctataaCGGTGGACGTAGACGATCCAGGTGTAGTAGTCTTCTCTTACCCCCGCTACTGTCGGTACCGAGCACTAGTGGCCAGGCTCGAAGGTATCCAGGCTGACTGGCTGAGAGATTCCCTCGTGGCCGCCTTAGGAGGATACGCTGCACCTACAAAATACAccagaatattatattgtaaaGATACGTTTGAATATCCGGAGCTCGAAGGTCACGAGTTCGTCTGCAACCACCTAGCTCCTAAACTAAAAGGACGGCCTCGAGGAAGGCGGAGGAGAGCAGCACAATCCCGAGATAGATCTGCAGATAGATCTCCAGATTCGAGATCTAGTGATAGTGACAGGAATACTCCTGAAACAAGGACACCAAGAAGGCTATCCCTCCGAAACGGCGCAGAAAAACAAAGTGAGGAAGAAGAAGAAGTAGAGAAGAATCCAGAAGAACTGGCCAAAGACGAGGCCTTCTTACAGCAACTTAGAGATTTTCTCAAACACAAaactgatattaaaatatcacatagtgttaaaaatgTATCCCTGCGTTCGCTGTACGCGTGGGTGTCGTCTCTGGGCGGGCTCGGCGCCGCGCGCGACCAGCTGTGGCGGCGCCGCTACGCCGAGCGCGGGCCGCGCCTCCGACGGATATATGAGAAATATCTCCTACAATACGAAAACCACGAACGATGGAACGgcaaaaaatatccaaaacttGCGAACGGCAAGCTAGAAGAACCAAAGACAATAGACACAATCGACGTAACAGACTCCCCAATAAgagaaatagaaacaaaacatGATCTCCCAGAAAAAAGATTGAGAACTCCATCCCCAAATATGGATAAGAAATCGGACAAAATGGATAAGAAGGACAAACTTATTTTGGACAATGAAACCGGAGAGTTGACGAAGGaagagttaaatataatttcgaaACCCGCTGAGGAATTGAATAGAGAGTTTTTAGAGTCTTTGCAAACTCCCGAAGAAGAGAAAGGAAAGATTTTCGTCAAACCTGTCGAGAAGTTGATAGAGCCAAGTCTGGGGGAGAATGAGAAGGATAGTAAGAATGAAGGCATATTCTTTAATGAATTGGCGCAAAAATTGAATTTGGGTAATTCAGACACACGTTTCTTACACCACCTGTCTCAAAAACAAGACAGCCTCTCCTCTTTGTCGTCGATGCAGGAAAAATACACGAATGGACACACAACAGATCCGCAAAAAATTCGCCCGGTGGGTCGCAGCTCCCTCCGCGCGGTGAGAGTCAAACCCACGAGGCCGATATCCGCTTCAGCTACACcgGCCCCACCACCCCGTACGGATTCTTCATCATCACCGACGCTCAACAACTTCGGCATCCATCACCCTCCGGCCGCCAGCCACAGTGATGATGAAATTGTAGAAGTTCCATACAAACCAAAAAGTCCAGAAATCATCGACCTCGACGAGTATCCAGAAAGCCCTCAAGGCATCAAGAAGAAGAAATTAGAAATTCTGAAAGAAAGGGGCCTCGAAGTAACCGCCGTGCCCCCCGGCCCCGTTTGGCCCCATTCCCCCATTACCCCTTTAATAACCCCTAGCCCTATCATCCTTAACCCGACAATACAACACCAAATTATGACACAAGCGCAATTATTCCAAATGTACAATATAGTCCCACCGACCTACCCCAATGGGGCACAAGCTCCTAAAGTCATACAAGCGTCTAGCGCTTTCGGTACTTCGGGTCCCGAGAAAACAGTGTACGGCAACCCCAAAGACCCTTTTATGCCACCTCCACACGTGTTACAAGGGACCCCAATTAAACCTCTAAGAAGTATTCAAACTCCCACTAACCCTCAAGATATTTTAGACTTGACTTGCAAAACCGAGACTTCTCCCATACAAAAACCTGCCGTAGAAATAGTCCGAATAGCCTCAACCCCCTCCCCGTCGAAGACCCCCAATTCTTTAAGCATCCCTCAGAATTTAAGCAAAAACTACACCCTAATCGATGGCaaagcggttgtgggttctaatcTAGAAATCACGCTAGTTAATACCAAATCCCAAACACCTCCAAAAAGACCCCCACAAAAACGCTCCTCCAATGGCAAATTCATATCGGCAAAGACCCCTACACCTCCAAAAGACTATCCCAAACCGTTTGCTTCTCCCAAAAAACCTCCAATAACGGTTCCCAATTATCAAATTCCTAACCGTGAAGAGTCCCCCACTAGTTCCAAAGACCCCAACGCTTTTAAAGGTTCAAATTTGACCCAAATGATGGAAATGCAGAAAAATGTACCCAGTTTGAATCCTTTCATGGACCCTCTGTATATGAATGCATTATATAACACTCTCGGTCCAATGGACCAACGTCAACTCGCGATGTACCGGGATCTAATGTCCAATCAGTTCAGGGGTTATAGTGGGTTGTTGAACATAGGCACACCGACAACGAAGAATTAG
Protein Sequence
MNISRQCLDNWAVCRFVLTILLHARYSLKDEVLAINDKVVLKAEDLLSWVCNGAGWTWGLRAVWRGACAPPSDPLLTAPLHHTKLDFSDVEREKSAITVDVDDPGVVVFSYPRYCRYRALVARLEGIQADWLRDSLVAALGGYAAPTKYTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAAQSRDRSADRSPDSRSSDSDRNTPETRTPRRLSLRNGAEKQSEEEEEVEKNPEELAKDEAFLQQLRDFLKHKTDIKISHSVKNVSLRSLYAWVSSLGGLGAARDQLWRRRYAERGPRLRRIYEKYLLQYENHERWNGKKYPKLANGKLEEPKTIDTIDVTDSPIREIETKHDLPEKRLRTPSPNMDKKSDKMDKKDKLILDNETGELTKEELNIISKPAEELNREFLESLQTPEEEKGKIFVKPVEKLIEPSLGENEKDSKNEGIFFNELAQKLNLGNSDTRFLHHLSQKQDSLSSLSSMQEKYTNGHTTDPQKIRPVGRSSLRAVRVKPTRPISASATPAPPPRTDSSSSPTLNNFGIHHPPAASHSDDEIVEVPYKPKSPEIIDLDEYPESPQGIKKKKLEILKERGLEVTAVPPGPVWPHSPITPLITPSPIILNPTIQHQIMTQAQLFQMYNIVPPTYPNGAQAPKVIQASSAFGTSGPEKTVYGNPKDPFMPPPHVLQGTPIKPLRSIQTPTNPQDILDLTCKTETSPIQKPAVEIVRIASTPSPSKTPNSLSIPQNLSKNYTLIDGKAVVGSNLEITLVNTKSQTPPKRPPQKRSSNGKFISAKTPTPPKDYPKPFASPKKPPITVPNYQIPNREESPTSSKDPNAFKGSNLTQMMEMQKNVPSLNPFMDPLYMNALYNTLGPMDQRQLAMYRDLMSNQFRGYSGLLNIGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00896559;
90% Identity
iTF_00775051;
80% Identity
-