Basic Information

Gene Symbol
arid5b
Assembly
GCA_905404265.1
Location
FR989983.1:18747361-18759889[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-11 2.5e-08 34.7 0.1 3 89 223 294 221 294 0.84

Sequence Information

Coding Sequence
ATGTTTTTTATCGATGAAGTCCTGGCCATCAATGACAAGGTAGTTCTCAAAGCAGAGGATCTTCTCAGTTGGGTGTGCAATGGGGCTGGATGGAGATGGGGTCTCAGGGCAGTGTGGAGAGGAGCCTGCGCACCCCCAGCCGACCCTCGGCTGACCGCTCCTCTGCACCACACAAAATTGGACTTCAGTGATGTGGAAAGAGAGAAAAGTGCTATAACGGTAGACGTAGACGACCCAGGAGTGGTGGTCTTCTCATACCCTCGGTACTGCCGCTATCGGGCGTTGCTGGCTCGGCTCGAGGGCATTCAGGCGGATTGGTTGAGGGATTCCCTAGTAGCAGCTTTGGGGGGATATGCAGCTCCCACCAGAAATACGAGGATATTGTACTGTAAGGACACATTCGAATACCCAGAACTTGAAGGTCATGAGTTCGTCTGTAACCATCTAGCTCCTAAACTGAAGGGGAGGCCCCGAGGCCGGCGGCGCAGGGCTGCGCGGTCCCGGGATAGGTCTGCGGATAGATCCCCGGACTCGCGTTCGAGTGACAGTGACAGGAACACGCCTGAAATTAAGACCCCAAGAAGACTATCCCTCCGAAACGGCGCAGAGAAGCAGAGTGAAGAAGAAGAAGAAGTAGAGAAGAACCCAGAAGAATTAGCCAAGGATGAAGCTTTTCTGGAGCAACTTAGAGAATTTCTCAAGCACAAAACTGATATCAAAATATCGCATAGTATTAAAAATGTGTCCCTGCGTTCGCTGTACGCGTGGGTGACGTCGCTGGGCGGCTACAGCGCATGCCGCGAGCAGCTGTGGCGCCGGCGCTACGCGGAGCGCGCGCCGCGACTGCGCCGCGTGTACGAGCGATATCTCCTCCCATACGAAAACCATGAATGGTGGAAAGGAAAAAAGTATTCCAAATTAACAAATGGCAAACTCGAAGAACCAAAGACAATAGATACCATAGACGTGACAGACTCCCCAATAAGGGATCTAGACACGAAACCCGAACTACCAGAGAAGAGACTCCGAACTCCATCCCCAAAACTCGAAAATTCCGACAAATCGGAAGTTTCAGAAAAACTCGGAAATCCGGAAAAAAACGGAAATCCGGATAAATTGGTATTAGATAACGAAACTGGTGAACTGACAAAAGAAGAATTAAACATAACATCTAAACCCGCAGAAGAGTTAAATAGAGAGTTTTTAGAATCCTTGAAAAATCCAGAAGAAGAGAAGGCTGCGAAGATTTTCGTGAAACCAGTAGAGAAATTGATAGAGCCTAGTTTGGGGAAAATGGAGAGTGAGTTGACGGAATCCAAAAACGAGGGCAGTTCGGTGTTTTTGAACGAATTAGCACAGAAATTAAATTTAGGCAATTCCGACACACGTTTCCTCCACCACCTCTCTCAGAAGCAAACAGACAGTCTCTCCAGCCTCTCCTCCCTCCAGGACAAATACACTAACGGGCATACATCTGACCCCCAAAAGACGCGCCCGGCCGGCCGCAGCTCGCTGCGCGCGGTGCGCGTCAAGCCCGCGCGCCCCGTCTCCGCCTCCGCCACGCCCGCGCCGGTCCCGCCTCGAGCAGACTCATCTTCCTCACCACCTACCATCAATAACTTCGGGATTCATCACCCGCCACACAACAACCATAGCGACGATGAAATCGTAGAGGTTCCCTACAAACCAAAAAGTCCGGAAATAATCGATCTCGATGAATATCCGGAAAGTCCACAAGGCATTAAGAAGAAGAAGCTAGAAATTCTCAAAGAAAGGGGCCTCGAAGTAACCGCGGTGCCCCCCGGCCCCGTCTGGCCTCATCCCCCCATAAACCCCTTAATAACCCCTAGCCCTATCATTCTTAACCCTACAATTCAACACCAAATTATGACTCAGGCACAAATATTCCAAATGTATAATATTATCCCACCGACTTACCCCAATGGGGTTCAAGCCCCCAAAGTTATTCAAGCTTCAAGTGCTTTCGGCAATTCTGGCCCCGAGAAAACCGTCTACGGGAATCCTAAGGACCCTTTCATGCCAACCCTTCATGTATTGCAAGGGACCCCTATCAAACCCCAAAGAAGTATCCAAACCCCTCCCTCGACCCCCCAAGATATATTAGACTTAACTTGCAAAACTCAAACAACTCCTATACAAAAACCAGCTGTTGAAATAGTTAGAATACCCCCCGCCCCCTCGCCGTCCAAAATCCCCAACACCCCTCAGAACCTAAGCAAAAATTATACTCTTCTTGACGGCAAAGCTGTAGTTGGTTCAAATCTAGAAATAACATTAGTAAACGCTAAATCCCAAACACCCCCAAAGAGACCCCCACAAAAACGCTCCTCAAACGGCAAATTTGTCTCCGCAAAAACGCCAACACCCCCAAAGGATTACCCCAAACAGTTCCCGTCCCCCAAAAAGCCCTCAATAGTCGTTCCGAACTATCAGATCTCAAATCGAGAAGAATCCCCAACGAGTTCAAAAGACCCCAATGCATTTAAGGGTTCAAACTTAACTCAGATGATGGAAATGCAAAAATCTGTACCTAGTTTGAACCCTTTTATGGACCCCTTGTATATGAATGCGTTTTATAATAGTCTGGGTCCAATGGACCAACGTCAATTGGCAATGTACAGGGACCTTATGACCAACCAGTTTAGGGGTTACAGTGGGTTATTAAACATAGGGACACCGACAACGAAAAATTAG
Protein Sequence
MFFIDEVLAINDKVVLKAEDLLSWVCNGAGWRWGLRAVWRGACAPPADPRLTAPLHHTKLDFSDVEREKSAITVDVDDPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAARSRDRSADRSPDSRSSDSDRNTPEIKTPRRLSLRNGAEKQSEEEEEVEKNPEELAKDEAFLEQLREFLKHKTDIKISHSIKNVSLRSLYAWVTSLGGYSACREQLWRRRYAERAPRLRRVYERYLLPYENHEWWKGKKYSKLTNGKLEEPKTIDTIDVTDSPIRDLDTKPELPEKRLRTPSPKLENSDKSEVSEKLGNPEKNGNPDKLVLDNETGELTKEELNITSKPAEELNREFLESLKNPEEEKAAKIFVKPVEKLIEPSLGKMESELTESKNEGSSVFLNELAQKLNLGNSDTRFLHHLSQKQTDSLSSLSSLQDKYTNGHTSDPQKTRPAGRSSLRAVRVKPARPVSASATPAPVPPRADSSSSPPTINNFGIHHPPHNNHSDDEIVEVPYKPKSPEIIDLDEYPESPQGIKKKKLEILKERGLEVTAVPPGPVWPHPPINPLITPSPIILNPTIQHQIMTQAQIFQMYNIIPPTYPNGVQAPKVIQASSAFGNSGPEKTVYGNPKDPFMPTLHVLQGTPIKPQRSIQTPPSTPQDILDLTCKTQTTPIQKPAVEIVRIPPAPSPSKIPNTPQNLSKNYTLLDGKAVVGSNLEITLVNAKSQTPPKRPPQKRSSNGKFVSAKTPTPPKDYPKQFPSPKKPSIVVPNYQISNREESPTSSKDPNAFKGSNLTQMMEMQKSVPSLNPFMDPLYMNAFYNSLGPMDQRQLAMYRDLMTNQFRGYSGLLNIGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00896559;
90% Identity
iTF_00213203;
80% Identity
iTF_00722825;