Basic Information

Insect: Leucozona laternaria
Gene Symbol: -
Assembly: GCA_932273905.1
Location: CAKNZR010000074.1:351179-354843[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.2e-05 0.011 17.4 0.8 2 23 413 434 412 434 0.97

2 16 1.6e-05 0.0028 19.3 1.1 1 23 440 462 440 462 0.98

3 16 0.00026 0.047 15.5 0.1 1 23 468 491 468 491 0.98

4 16 4e-05 0.0071 18.0 3.5 1 23 506 528 506 528 0.98

5 16 9.6e-05 0.017 16.8 2.7 1 23 568 590 568 590 0.97

6 16 8.5e-05 0.015 17.0 1.8 1 23 596 618 596 618 0.98

7 16 1.5e-05 0.0028 19.3 0.6 2 23 726 747 725 747 0.96

8 16 5.3e-06 0.00095 20.8 3.1 1 23 753 775 753 775 0.98

9 16 3.8e-05 0.0069 18.1 0.7 1 23 781 804 781 804 0.98

10 16 0.00056 0.1 14.4 2.7 1 23 815 837 815 837 0.98

11 16 7.7e-06 0.0014 20.3 0.8 1 23 850 872 850 872 0.98

12 16 0.019 3.4 9.6 2.0 1 23 878 900 878 900 0.97

13 16 3.3e-05 0.006 18.3 0.3 2 23 906 928 905 928 0.96

14 16 0.86 1.5e+02 4.4 0.2 1 23 936 959 936 959 0.90

15 16 0.26 47 6.0 1.9 2 23 968 990 968 990 0.92

16 16 0.00071 0.13 14.1 2.0 2 23 996 1017 995 1017 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.2e-05	0.011	17.4	0.8	2	23	413	434	412	434	0.97
2	16	1.6e-05	0.0028	19.3	1.1	1	23	440	462	440	462	0.98
3	16	0.00026	0.047	15.5	0.1	1	23	468	491	468	491	0.98
4	16	4e-05	0.0071	18.0	3.5	1	23	506	528	506	528	0.98
5	16	9.6e-05	0.017	16.8	2.7	1	23	568	590	568	590	0.97
6	16	8.5e-05	0.015	17.0	1.8	1	23	596	618	596	618	0.98
7	16	1.5e-05	0.0028	19.3	0.6	2	23	726	747	725	747	0.96
8	16	5.3e-06	0.00095	20.8	3.1	1	23	753	775	753	775	0.98
9	16	3.8e-05	0.0069	18.1	0.7	1	23	781	804	781	804	0.98
10	16	0.00056	0.1	14.4	2.7	1	23	815	837	815	837	0.98
11	16	7.7e-06	0.0014	20.3	0.8	1	23	850	872	850	872	0.98
12	16	0.019	3.4	9.6	2.0	1	23	878	900	878	900	0.97
13	16	3.3e-05	0.006	18.3	0.3	2	23	906	928	905	928	0.96
14	16	0.86	1.5e+02	4.4	0.2	1	23	936	959	936	959	0.90
15	16	0.26	47	6.0	1.9	2	23	968	990	968	990	0.92
16	16	0.00071	0.13	14.1	2.0	2	23	996	1017	995	1017	0.97

Sequence Information

Coding Sequence: ATGTCTGTCAAATTGGATGATTCTGTTTGCCGGGTGTGTTTAAGTTCATCGGGCAGCATAACAATTTTCGATGATTGCGGCAAAGATGACCAATTTCGTTATTGTACTTCACTGGAGGCCTCCAGAGAAGATGGTCTCCCGTCGAAACTTTGTAAGAAGTGCAACGACCATCTAAAAGTTGCCTACGATTTTCGTTTCCAAGCCATTTATGCTGAGAAATATTTTCGAAAAACTATTTTCTTGCCTTCCTTTAAGAAAGAAGACGATGGGGTAAACAGCAATGTCGAAGAAATCGATAGAAACCCAAACAATCATTGTTCCGATGAACTGGACGAGAATATGGCCGAAATTGATATGTTGCTAGCGATCCATACGGAATGCGCTGAAGATGCCAGCGGAGATAATGACGAAGACGACAATAATGATGTGATGATGGACAATACTGAGTTCTTTGACAATGATATTGCCGATATTGATGAGAAGCAGGTTGAAATCATTGGGATGGAAACATTTGAAAAAGAAAAGCGTGAACAAAAGGAGCAGAAAGTCAAGTTAGAAATCGCAAATGTCCCACCGCCACTAGTTTCCATTACAGAACGCAGCACGAGGTATGAAATATCACCGGGGGCAATGACCAGCATACCGTTGGAATCTCCACAACCGGCAATAAGCAATAACAGCAGTATTGTGCAACAAGCTCATGTTAGTATAGATGAAATCCAACACTACCCGGATTCGGGCAGTTTTGCCCATCATACTCAATCTGTTCAAGAAATAACCGTGGAGAACACCAATGGCAGATCTGAGCACCTAGAAATTCATCCTGTCTTGAAGAACGATCCATCTGGCTTTGATTTTAATGTTCCATCGACGGTTCCTGTTGGCTACGACTCGTATTCCACGTCATCGCAGATTCAGTTCCAACAAATTCCTCTCCAGATGGAATATGAGCAACAACATAATTCATTGCCACTACAAGAATCTATGCGTCCAAACTCTGAGAACTATGATTTCCCCTATCAAGAATCATTCTCAACTTATGGCACACAAACCAATGAAATAATTCCTCAACAACAACAACAACAACAGGAAAACATTCAACAGTTTCAACAACAAGATCAAATTGCCGAACAACTACCTAACGGCAAAAATTTTAAGACTGAATATCTGGAAGTGACAGTTGTTCCGAAAACAAAAAAAGCAAAAACCACAACATCAAGTCGCAAGGATAGAATcgaatgtaatatttgcggaagtgtcttcacgcatttgaattcacttaagactcatctactgagccattcgggtgagaaacctttcaagtgtgagttctgcgataaggcttttgctcggaaaacagtcctgaatatacatcggcggctgcacaccggtgagaaaccatataagtgctccctgtgcccAAGTGCCTATGTTACCAAAGAAGCTCTGGCGCGCCATTTACAAAAAGACCACGTAGAAGAAGTGGGAGCTAATTTCCGTCGCGATAAAGTATCATACATTTGTTCCATATGCAATAAGTCCCGTTGTTCGAAATACTCCCTCGCTTCTCATATGAAGACACATTCAAATGAAACAAAGGTACGTCGAAAGATAGTTCGCAAAAGAAAAGAAAAAAAGTCAGTTAGTCGAGATGATGCTTCATCTATTGGATTGGTAGCACAACACAACGTTCTTTTAAAATATTCTTGCAAAATCTGCCATAAGGGCTTTCCCAACAAATGGGAATTGTGTACACATGCCGAATCGCATAACATGCACAAAACCTTCGAATGTGATGTTTGCCAGAGAACGTTCGAAAAAAAGTTCCAATTGCTTTATCACTTACAAACCCACGAAGGTGGTGAAGAATTGGTGAAAGCTAAAGTGAAACCGAGTGTCGAACAAACGAATCCTATTAATGAGATCAAGGAGGAGAAGGCACATGATCAGCCGCTGTTAGCTGAGAAGAAAACTAAAAGGAAACTCCGAGTTTCGAAGCGCCGGAAAAAGAAAGCAAAAATTGATTATGAAGAGGAGCAGGATGAGGATGAAATGAGCGACAAAAGTGAAGAAAAACACTATGACGATGATAAAGCGGCGAAAGTTTCAAGCAAAAAGAGAACAACCCGAGCTCAACGTGAAAACCTTAAGGTACTGCGAACGAGTAGTAAAATTGAGTGTCTTATATGCCAGACTGTGTTTACCCATCCAACGTCCCTCAAAACTCACATGCTTGTACATTCGGGTGAACGCCCATTCAAGTGTGATCACTGTGATAAGTCATTTGCCAGGAAAACCGTTCTTAATATCCATCGAAGACTACATACCGGTGAGAAGCCATATAAATGTCCGCTCTGTGATAGTGCTTGCGTCACAAAGGATGCTCTTATGCGCCACATGTCCAAGGACCACGACGACGATCGGGAAGCTGATAGAATAAAATTCACCTGTGGCGTCTGCCATAAATCAATGGGTACCAAGTACTCTCTACAAACGCACATGAAACTTCACGAACAAAGCACAACAGCAAGTACAGCTGAGCTGAATTTCTCTTGCAACATGTGTACCGAGACCTTCGATACTAAATCCGATTATGCGAAGCATATGGAGGTGCATGATTCGCATAGAAATTTCCAGTGTGACATCTGTCAGGTTACATTCGAGAAGAAATTCAAACTCCTCTTTCATTTGCAAACACACAAAATCGAGGACCTGCCGTGCAAAAAATGTGGCGAGACTTTCACTATAAGGGAAAATCTCATACAACACGTCAAGATGCAACACATCGACCCTCAGAACATGGACTTTCAATGCCCCACCTGCAACATGGGCCAATACGATACTCGAGATTTAAAGTTGCATGTGTTAAATGTGCACGAAGTGGTCATGGGTGAATTGAATTCCTGCGATATGTGTGGTGAAAGTCATTCTACAGCAGCGGAGTACTATAAACATATGCACGATAAACATGATTCAATCAGTAAAACGTGCAATGAGTGTAAGAAGTACTTTGACTCGCGAAAGGCATTCGATAAGCACATACTTACGCATTACATGTGA
Protein Sequence: MSVKLDDSVCRVCLSSSGSITIFDDCGKDDQFRYCTSLEASREDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSFKKEDDGVNSNVEEIDRNPNNHCSDELDENMAEIDMLLAIHTECAEDASGDNDEDDNNDVMMDNTEFFDNDIADIDEKQVEIIGMETFEKEKREQKEQKVKLEIANVPPPLVSITERSTRYEISPGAMTSIPLESPQPAISNNSSIVQQAHVSIDEIQHYPDSGSFAHHTQSVQEITVENTNGRSEHLEIHPVLKNDPSGFDFNVPSTVPVGYDSYSTSSQIQFQQIPLQMEYEQQHNSLPLQESMRPNSENYDFPYQESFSTYGTQTNEIIPQQQQQQQENIQQFQQQDQIAEQLPNGKNFKTEYLEVTVVPKTKKAKTTTSSRKDRIECNICGSVFTHLNSLKTHLLSHSGEKPFKCEFCDKAFARKTVLNIHRRLHTGEKPYKCSLCPSAYVTKEALARHLQKDHVEEVGANFRRDKVSYICSICNKSRCSKYSLASHMKTHSNETKVRRKIVRKRKEKKSVSRDDASSIGLVAQHNVLLKYSCKICHKGFPNKWELCTHAESHNMHKTFECDVCQRTFEKKFQLLYHLQTHEGGEELVKAKVKPSVEQTNPINEIKEEKAHDQPLLAEKKTKRKLRVSKRRKKKAKIDYEEEQDEDEMSDKSEEKHYDDDKAAKVSSKKRTTRAQRENLKVLRTSSKIECLICQTVFTHPTSLKTHMLVHSGERPFKCDHCDKSFARKTVLNIHRRLHTGEKPYKCPLCDSACVTKDALMRHMSKDHDDDREADRIKFTCGVCHKSMGTKYSLQTHMKLHEQSTTASTAELNFSCNMCTETFDTKSDYAKHMEVHDSHRNFQCDICQVTFEKKFKLLFHLQTHKIEDLPCKKCGETFTIRENLIQHVKMQHIDPQNMDFQCPTCNMGQYDTRDLKLHVLNVHEVVMGELNSCDMCGESHSTAAEYYKHMHDKHDSISKTCNECKKYFDSRKAFDKHILTHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00694017; iTF_01396745; iTF_00664270; iTF_00426549; iTF_00694871; iTF_00665050; iTF_00335292; iTF_01318428; iTF_00974973;
90% Identity: iTF_00664270;
80% Identity: -